BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0001.p         (216 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

E8XMA4.1 E8XMA4_RAHSY L-carnitine dehydratase/bile acid-inducibl...   119   4e-25
Q397U8.1 Q397U8_BURS3 L-carnitine dehydratase/bile acid-inducibl...   117   1e-24
E2XX03.1 E2XX03_PSEFL L-carnitine dehydratase/bile acid-inducibl...   116   2e-24
Q3K7Y4.1 Q3K7Y4_PSEPF Putative CoA transferase family protein         115   5e-24
A9BMJ1.1 A9BMJ1_DELAS L-carnitine dehydratase/bile acid-inducibl...   115   6e-24

>E8XMA4.1 E8XMA4_RAHSY L-carnitine dehydratase/bile acid-inducible protein F
          Length = 460

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 66/81 (81%)

Query: 12  SGAWKTRRGFDSLVQMSSGIAEAGMRRLGRDKPTPLPVQALDHATGYLMATAAIRGLTQR 71
           SG W+ RRGFDSLVQMS GIAE GM+R GR KP PLPVQALDH TGYLMA A ++GLTQR
Sbjct: 316 SGPWRERRGFDSLVQMSCGIAEQGMQRSGRHKPVPLPVQALDHTTGYLMAAAVLQGLTQR 375

Query: 72  LKTGKGSEVLTSLARMAQLLV 92
           ++TG+GSE   SLAR A+ L+
Sbjct: 376 METGQGSECRLSLARTARELM 396


>Q397U8.1 Q397U8_BURS3 L-carnitine dehydratase/bile acid-inducible protein F
           EC=2.8.3.16
          Length = 477

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 65/77 (84%)

Query: 12  SGAWKTRRGFDSLVQMSSGIAEAGMRRLGRDKPTPLPVQALDHATGYLMATAAIRGLTQR 71
           SG W+ RRGFDSL+Q S+GIAEAGMR +GRD+P  LPVQA+DHATGYLMATAAIRGLT R
Sbjct: 328 SGEWRCRRGFDSLIQTSTGIAEAGMRVMGRDEPVNLPVQAIDHATGYLMATAAIRGLTTR 387

Query: 72  LKTGKGSEVLTSLARMA 88
           +K G G+EV  SLAR A
Sbjct: 388 MKLGVGTEVRASLARTA 404


>E2XX03.1 E2XX03_PSEFL L-carnitine dehydratase/bile acid-inducible protein F
          Length = 449

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 65/81 (80%)

Query: 12  SGAWKTRRGFDSLVQMSSGIAEAGMRRLGRDKPTPLPVQALDHATGYLMATAAIRGLTQR 71
           SG W+ RRGFDSLVQMSSGIA+AGM     DKP PLP+QALDHATGYLMA +AIR L++R
Sbjct: 308 SGPWRNRRGFDSLVQMSSGIADAGMAWKQSDKPVPLPLQALDHATGYLMAASAIRALSER 367

Query: 72  LKTGKGSEVLTSLARMAQLLV 92
           LKTG+G     SLAR A+LLV
Sbjct: 368 LKTGRGGSARLSLARTAKLLV 388


>Q3K7Y4.1 Q3K7Y4_PSEPF Putative CoA transferase family protein
          Length = 448

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 68/92 (73%), Gaps = 1/92 (1%)

Query: 12  SGAWKTRRGFDSLVQMSSGIAEAGMRRLGRDKPTPLPVQALDHATGYLMATAAIRGLTQR 71
           SG W+ RRGFDSLVQMSSGIAEAG R    DKPTPLPVQALDHATGYLMA + IR L +R
Sbjct: 308 SGPWQNRRGFDSLVQMSSGIAEAGQRWKQADKPTPLPVQALDHATGYLMAASVIRLLAER 367

Query: 72  LKTGKGSEVLTSLARMAQLLVTGSGKQVDAAL 103
           L++G+G     SLAR A+LL+   G   D AL
Sbjct: 368 LRSGRGGSARLSLARTAKLLIE-HGPGTDQAL 398


>A9BMJ1.1 A9BMJ1_DELAS L-carnitine dehydratase/bile acid-inducible protein F
          Length = 469

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/80 (68%), Positives = 64/80 (80%)

Query: 12  SGAWKTRRGFDSLVQMSSGIAEAGMRRLGRDKPTPLPVQALDHATGYLMATAAIRGLTQR 71
           SG W+ RRGFDSLVQMS+GIA+AGM RLGRD+PTPLP+QALDHATGYLMA A +  L +R
Sbjct: 326 SGPWQQRRGFDSLVQMSAGIADAGMHRLGRDRPTPLPLQALDHATGYLMAAAVVMALVRR 385

Query: 72  LKTGKGSEVLTSLARMAQLL 91
           ++   GS V  SLAR A LL
Sbjct: 386 MQGQGGSTVRASLARTAHLL 405