BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0020.p         (256 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IQH0.1 D8IQH0_HERSS Translation initiation factor IF-2              504   e-141
A6T0Y8.1 IF2_JANMA Translation initiation factor IF-2                 484   e-135
A4G7S7.1 IF2_HERAR Translation initiation factor IF-2                 481   e-134
F1VXY5.1 F1VXY5_9BURK Protein chain initiation factor IF-2            461   e-128
C3X4B8.1 C3X4B8_OXAFO Translation initiation factor IF-2              452   e-125

>D8IQH0.1 D8IQH0_HERSS Translation initiation factor IF-2
          Length = 954

 Score =  504 bits (1297), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/256 (96%), Positives = 252/256 (98%)

Query: 1   VPSAGEEVVVMSDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMAEGEVKNLPMII 60
           VPSAGEEVVVM+DERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQM EGEVKNLPMII
Sbjct: 699 VPSAGEEVVVMTDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMTEGEVKNLPMII 758

Query: 61  KTDVQGSQEALVQSLQKLSTAEVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS 120
           KTDVQGSQEALVQSLQKLST EVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS
Sbjct: 759 KTDVQGSQEALVQSLQKLSTNEVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS 818

Query: 121 ARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA 180
           ARKLAEA+GVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA
Sbjct: 819 ARKLAEASGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA 878

Query: 181 GCYVLEGLVKRGSQVRLLRNNVVLWTGELDSLKRFKDDVKEVKSGFECGLSLKNYNDIQE 240
           GCYVLEGLVKRGSQVRLLRNNVV+WTGELDSLKRFKDDVKEVKSGFECGLSLK YNDI+ 
Sbjct: 879 GCYVLEGLVKRGSQVRLLRNNVVVWTGELDSLKRFKDDVKEVKSGFECGLSLKGYNDIEV 938

Query: 241 GDQLEIFEVQEVARTL 256
           GDQLEIFEVQEVARTL
Sbjct: 939 GDQLEIFEVQEVARTL 954


>A6T0Y8.1 IF2_JANMA Translation initiation factor IF-2
          Length = 937

 Score =  484 bits (1245), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 231/256 (90%), Positives = 250/256 (97%)

Query: 1   VPSAGEEVVVMSDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMAEGEVKNLPMII 60
           VP+AGEEV+VM+DERKAREIGLFRQGKFRDVKLAKQQAAKLENMF+ M EGEVKNLPMII
Sbjct: 682 VPNAGEEVMVMADERKAREIGLFRQGKFRDVKLAKQQAAKLENMFENMGEGEVKNLPMII 741

Query: 61  KTDVQGSQEALVQSLQKLSTAEVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS 120
           KTDVQGSQEALV SLQKLST+EVRVQVVHAAVGGISE+DVNLAVASKAVIIGFNTRADAS
Sbjct: 742 KTDVQGSQEALVGSLQKLSTSEVRVQVVHAAVGGISESDVNLAVASKAVIIGFNTRADAS 801

Query: 121 ARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA 180
           ARKLAEANGVDIRYYNIIYDAVDE+KAAMSGML+PEKREQALGLVEIRQV +VSKVG+IA
Sbjct: 802 ARKLAEANGVDIRYYNIIYDAVDEIKAAMSGMLAPEKREQALGLVEIRQVILVSKVGAIA 861

Query: 181 GCYVLEGLVKRGSQVRLLRNNVVLWTGELDSLKRFKDDVKEVKSGFECGLSLKNYNDIQE 240
           GCYVLEG+ KRGS VRLLR+NVV+WTGELDSLKRFKDDVKEVK+GFECGL+LKN+NDI+E
Sbjct: 862 GCYVLEGVAKRGSSVRLLRDNVVVWTGELDSLKRFKDDVKEVKAGFECGLTLKNFNDIKE 921

Query: 241 GDQLEIFEVQEVARTL 256
           GDQLE+FEVQE+ARTL
Sbjct: 922 GDQLEVFEVQEIARTL 937


>A4G7S7.1 IF2_HERAR Translation initiation factor IF-2
          Length = 941

 Score =  481 bits (1239), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/256 (90%), Positives = 248/256 (96%)

Query: 1   VPSAGEEVVVMSDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMAEGEVKNLPMII 60
           VP+AGEEV+VM+DERKAREIGLFRQGKFRDVKLAKQQAAKLENMF+ M EGEVKNLPMII
Sbjct: 686 VPNAGEEVMVMADERKAREIGLFRQGKFRDVKLAKQQAAKLENMFENMGEGEVKNLPMII 745

Query: 61  KTDVQGSQEALVQSLQKLSTAEVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS 120
           KTDVQGSQEALV SLQKLST EVRVQVVHAAVGGISE+DVNLAVASKAVIIGFNTRADAS
Sbjct: 746 KTDVQGSQEALVGSLQKLSTGEVRVQVVHAAVGGISESDVNLAVASKAVIIGFNTRADAS 805

Query: 121 ARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA 180
           ARKLAEANGVDIRYYNIIYDAVDE+KAAMSGMLSPEKREQALGLVEIRQV +VSKVG+IA
Sbjct: 806 ARKLAEANGVDIRYYNIIYDAVDEIKAAMSGMLSPEKREQALGLVEIRQVILVSKVGAIA 865

Query: 181 GCYVLEGLVKRGSQVRLLRNNVVLWTGELDSLKRFKDDVKEVKSGFECGLSLKNYNDIQE 240
           GCYVLEG+VKRG+ VRLLR+NVV+WTGELDSLKRFKDD KEVK GFECGL+LKN+NDI+E
Sbjct: 866 GCYVLEGVVKRGASVRLLRDNVVIWTGELDSLKRFKDDAKEVKFGFECGLTLKNFNDIKE 925

Query: 241 GDQLEIFEVQEVARTL 256
           GDQLE+FEVQE+ARTL
Sbjct: 926 GDQLEVFEVQEIARTL 941


>F1VXY5.1 F1VXY5_9BURK Protein chain initiation factor IF-2
          Length = 436

 Score =  461 bits (1187), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/256 (86%), Positives = 246/256 (96%)

Query: 1   VPSAGEEVVVMSDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMAEGEVKNLPMII 60
           VP AGE+V+VM DERKAREIGLFRQGKFRDVKLAKQQAAKLENMFD + EGEVKNLPMII
Sbjct: 181 VPIAGEDVMVMLDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDNLGEGEVKNLPMII 240

Query: 61  KTDVQGSQEALVQSLQKLSTAEVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS 120
           KTDVQGSQEALVQSLQKLST+EVRVQVVHA VGGI+E+DVNLAVASKAVIIGFN RADA 
Sbjct: 241 KTDVQGSQEALVQSLQKLSTSEVRVQVVHAGVGGITESDVNLAVASKAVIIGFNVRADAQ 300

Query: 121 ARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA 180
           +RK+AE+NGVDIRYYNIIYDAVDE+KAAMSGML+PEKREQ+LGLVEIRQV +VSKVG+IA
Sbjct: 301 SRKVAESNGVDIRYYNIIYDAVDEIKAAMSGMLAPEKREQSLGLVEIRQVLLVSKVGAIA 360

Query: 181 GCYVLEGLVKRGSQVRLLRNNVVLWTGELDSLKRFKDDVKEVKSGFECGLSLKNYNDIQE 240
           GCYVLEGLV+RG+ VRLLR+NV+LW+GE+DSLKRFKDDVKEVK GFECGL+LKN+NDI+E
Sbjct: 361 GCYVLEGLVRRGASVRLLRDNVILWSGEIDSLKRFKDDVKEVKFGFECGLTLKNFNDIKE 420

Query: 241 GDQLEIFEVQEVARTL 256
           GDQLEIFEVQEVAR+L
Sbjct: 421 GDQLEIFEVQEVARSL 436


>C3X4B8.1 C3X4B8_OXAFO Translation initiation factor IF-2
          Length = 979

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/256 (82%), Positives = 241/256 (94%)

Query: 1   VPSAGEEVVVMSDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMAEGEVKNLPMII 60
           VPSAGEE+VV++DERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQ+AEGEVK LP+I+
Sbjct: 724 VPSAGEEIVVLNDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQIAEGEVKTLPLIV 783

Query: 61  KTDVQGSQEALVQSLQKLSTAEVRVQVVHAAVGGISENDVNLAVASKAVIIGFNTRADAS 120
           KTDVQGSQEAL  SL KLS  EVRVQ+VHAAVGGI+E DVNLA+ASKAVIIGFNTRADA 
Sbjct: 784 KTDVQGSQEALAASLLKLSNDEVRVQIVHAAVGGITETDVNLALASKAVIIGFNTRADAQ 843

Query: 121 ARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQVFVVSKVGSIA 180
           AR LAEANGVDIRYYNIIYDA+DEVKAAMSGML+PEKRE ALGLVEIRQV +VS+VG+IA
Sbjct: 844 ARHLAEANGVDIRYYNIIYDAIDEVKAAMSGMLAPEKREHALGLVEIRQVIMVSRVGAIA 903

Query: 181 GCYVLEGLVKRGSQVRLLRNNVVLWTGELDSLKRFKDDVKEVKSGFECGLSLKNYNDIQE 240
           GC+V EGLV+RGS V LLR+NVV+W+GE+DSLKRFKDDVKEVK+GFECGL+LKNYNDI+ 
Sbjct: 904 GCFVTEGLVRRGSPVHLLRDNVVIWSGEIDSLKRFKDDVKEVKAGFECGLTLKNYNDIKV 963

Query: 241 GDQLEIFEVQEVARTL 256
           GDQ+E++E+QE+AR+L
Sbjct: 964 GDQIEVYEIQEIARSL 979