BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0005.p (1047 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1WES8.1 A1WES8_VEREI Acriflavin resistance protein 1820 0.0 D8IWG2.1 D8IWG2_HERSS Cation/multidrug efflux pump protein 1819 0.0 E6UX88.1 E6UX88_VARPD Acriflavin resistance protein 1683 0.0 Q1LQU0.1 Q1LQU0_RALME Multidrug efflux system, subunit B 1543 0.0 A7IFQ1.1 A7IFQ1_XANP2 Acriflavin resistance protein 1344 0.0 >A1WES8.1 A1WES8_VEREI Acriflavin resistance protein Length = 1051 Score = 1820 bits (4715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/1053 (86%), Positives = 974/1053 (92%), Gaps = 14/1053 (1%) Query: 1 VSATFIKRPIGTTLLALAILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN 60 VSA FI+RPIGTTLLA+AILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN Sbjct: 3 VSARFIQRPIGTTLLAIAILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN 62 Query: 61 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPSN 120 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLP++ Sbjct: 63 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPTS 122 Query: 121 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQVSDFADNILAQQISQISGVGLVNVNGAQK 180 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQV+D+ADNILAQQISQISGVGLV+V+G QK Sbjct: 123 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQVNDYADNILAQQISQISGVGLVSVHGQQK 182 Query: 181 PAVRIQVDPAKLATLNLSLEDIRGVIATTTVNQPKGTVDGTHQSFTVYTNDQLLSADPWN 240 PAVRIQVDPA+LATL LSLEDIRG IATT+VNQPKGTVDG HQSFTVYTNDQLLSA+PWN Sbjct: 183 PAVRIQVDPARLATLGLSLEDIRGAIATTSVNQPKGTVDGAHQSFTVYTNDQLLSAEPWN 242 Query: 241 DMVLAYRAGAPIHVRDIGVAIDAPENMKIAAWAFSGAAAETDTTLTNGRSIVLAITAMP- 299 DMVLAYR GAP+ VRDIGVAIDAPEN KIAAWA++GA A +D TL NGR+IVLAIT P Sbjct: 243 DMVLAYRHGAPVRVRDIGVAIDAPENNKIAAWAYAGAMAPSDDTLANGRAIVLAITKQPG 302 Query: 300 -RLRAAIPXIKAAMPRLRAAIPASVHVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVIF 358 + + IKAAMPRLRAAIPASV V+TLIDRTQTIRASV DVEFTLVL+IALVVMVIF Sbjct: 303 ANVIETVGRIKAAMPRLRAAIPASVRVDTLIDRTQTIRASVGDVEFTLVLSIALVVMVIF 362 Query: 359 VFLRNIAATLIPSITVPLAIMGTAAVMYLVGYSLDNLSLMALTIAVGFVVDDAIVMLENI 418 VFLRN+AATLIP ITVPLA+MGTA VMYL GYSLDNLSLMALTIAVGFVVDDAIVMLENI Sbjct: 363 VFLRNVAATLIPGITVPLALMGTAGVMYLAGYSLDNLSLMALTIAVGFVVDDAIVMLENI 422 Query: 419 YRYVEEGMSPMEAALKGSSEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 478 YR+VE GM+PM+AALKG+SEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT Sbjct: 423 YRHVEAGMTPMQAALKGASEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 482 Query: 479 IGVSVIISLTLTPMLCSRFLKNSHAEQHGKMYQLFERFFDALLNGYKRGLDLVLRHQFIT 538 I VSVIISLTLTPMLCSRFLKNSHA +HGK YQLFERFFD L GY+R LD+V+RHQF+T Sbjct: 483 IAVSVIISLTLTPMLCSRFLKNSHAARHGKPYQLFERFFDILQKGYQRSLDVVMRHQFVT 542 Query: 539 LMSFLATVAVTVALFIFIPKGFFPQQDNGVIAGFAESAQDISSSAMHRRLLQVADVVRKD 598 L++F+ T+A+TV LF+ IPKGFFPQQDNGVI GFAESAQDISS AM R LLQVA++VRKD Sbjct: 543 LLTFIGTMAMTVMLFVAIPKGFFPQQDNGVIVGFAESAQDISSQAMQRHLLQVAEIVRKD 602 Query: 599 PDVTGFAMSAGSTTFNTGNFFIALKPKSEGRTLDASEIITHLRPQVAKIQGVNLFMQASQ 658 PDV GFAMSAGSTTFNTGNFFIALKP GRT ASEIIT LRPQ+A IQGVNLFMQASQ Sbjct: 603 PDVAGFAMSAGSTTFNTGNFFIALKPTDAGRTASASEIITRLRPQIAGIQGVNLFMQASQ 662 Query: 659 DINVGGRLSRTQYQYTLTDSNLDELNVWAPKLVDRLRRLKQLTDVASDQQNSAATATITI 718 DINVGGRL+RTQYQYTLTDSNLDEL+ WAPK+V+RLRR+KQLTDV SDQQN+AATATITI Sbjct: 663 DINVGGRLARTQYQYTLTDSNLDELDTWAPKMVERLRRMKQLTDVVSDQQNNAATATITI 722 Query: 719 DRARASSFGISPALIDATIYDAIGQRQVAQYFTQVNSYRVILEVTPELQKDPALFNKLYL 778 DRARASSFGISPALIDA+IYDAIGQRQVAQYFTQ+NSY V+LEVTP LQ+DPALFNKLYL Sbjct: 723 DRARASSFGISPALIDASIYDAIGQRQVAQYFTQINSYHVVLEVTPALQRDPALFNKLYL 782 Query: 779 TSPLTGQQVPLSTFIKVDTTKTAYLSISHQSQFPAVTISFNLAHGVALGEAVDAINQAQA 838 TSPLTGQQVPLSTFI+VDT+KTAYLSISHQ QFPAVTISFNLA GV+LGEAVDAIN+AQA Sbjct: 783 TSPLTGQQVPLSTFIEVDTSKTAYLSISHQGQFPAVTISFNLAAGVSLGEAVDAINRAQA 842 Query: 839 EMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS 898 EMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS Sbjct: 843 EMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS 902 Query: 899 AGVGALLILMAGGYDLSV-----IALIGIIXKKNGIMMIDFALTAERQHGMKPEEAIYQA 953 AGVGALLILMAGGYDLSV I L+ I KKNGIMMIDFALTAERQ GMKP+ AIYQA Sbjct: 903 AGVGALLILMAGGYDLSVIALIGIILLIGIVKKNGIMMIDFALTAERQQGMKPQAAIYQA 962 Query: 954 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYL 1013 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPV+YL Sbjct: 963 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVIYL 1022 Query: 1014 YLDRAHYWYMNKKEARAARKAARKGGAAPVIES 1046 YLDRAHYWYM +K+++ A G P IES Sbjct: 1023 YLDRAHYWYMGRKKSKHA-------GMIPAIES 1048 >D8IWG2.1 D8IWG2_HERSS Cation/multidrug efflux pump protein Length = 1051 Score = 1819 bits (4711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 900/1043 (86%), Positives = 968/1043 (92%), Gaps = 7/1043 (0%) Query: 1 VSATFIKRPIGTTLLALAILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN 60 VSA FIKRPIGTTLLA+AILLVG+AVWPLLPVAPLPQVDFPTIQV+A LPGGSPETMASN Sbjct: 3 VSAAFIKRPIGTTLLAIAILLVGVAVWPLLPVAPLPQVDFPTIQVTAQLPGGSPETMASN 62 Query: 61 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPSN 120 VAQPLERQFSLIAGLSQMTSQS LGSTQITLQFDLNRNIDAAALDVQAAINASTGQLP+N Sbjct: 63 VAQPLERQFSLIAGLSQMTSQSTLGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPAN 122 Query: 121 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQVSDFADNILAQQISQISGVGLVNVNGAQK 180 LPNPPTFRK+NPADSPIMIMSVQS+ALPLT V+D+ADNILAQQISQISGVGLVNVNG QK Sbjct: 123 LPNPPTFRKINPADSPIMIMSVQSEALPLTVVNDYADNILAQQISQISGVGLVNVNGQQK 182 Query: 181 PAVRIQVDPAKLATLNLSLEDIRGVIATTTVNQPKGTVDGTHQSFTVYTNDQLLSADPWN 240 PAVRIQVDPAKLATL LSLEDIRGVIATTTVNQPKGTVDG Q+FTVYTNDQLL A+ WN Sbjct: 183 PAVRIQVDPAKLATLGLSLEDIRGVIATTTVNQPKGTVDGARQAFTVYTNDQLLKAEQWN 242 Query: 241 DMVLAYRAGAPIHVRDIGVAIDAPENMKIAAWAFSGAAAETDTTLTNGRSIVLAITAMP- 299 DMVLA+R GAPI V+DIG+A+D PEN KIAAWAF+GAA D ++TNGRSIVLAIT P Sbjct: 243 DMVLAWRNGAPIRVKDIGIAVDGPENNKIAAWAFAGAANTADHSITNGRSIVLAITKQPG 302 Query: 300 -RLRAAIPXIKAAMPRLRAAIPASVHVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVIF 358 + + IKAAMPRLRAAIPA++HVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVIF Sbjct: 303 ANVIETVGRIKAAMPRLRAAIPAAIHVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVIF 362 Query: 359 VFLRNIAATLIPSITVPLAIMGTAAVMYLVGYSLDNLSLMALTIAVGFVVDDAIVMLENI 418 VFLRN+AATLIPS+TVPLAIMGTA VMY+VGYSLDNLSLMALTIAVGFVVDDAIVMLENI Sbjct: 363 VFLRNVAATLIPSVTVPLAIMGTAGVMYVVGYSLDNLSLMALTIAVGFVVDDAIVMLENI 422 Query: 419 YRYVEEGMSPMEAALKGSSEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 478 YRYVEEGM+P+EAALKG+ EIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT Sbjct: 423 YRYVEEGMTPLEAALKGAGEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 482 Query: 479 IGVSVIISLTLTPMLCSRFLKNSHAEQHGKMYQLFERFFDALLNGYKRGLDLVLRHQFIT 538 I VSVIISLTLTPMLCSRFLKN H ++HGK+YQ FER FDA+L GYKRGLD+V++HQFIT Sbjct: 483 IAVSVIISLTLTPMLCSRFLKNEHGQRHGKLYQWFERCFDAMLAGYKRGLDVVMKHQFIT 542 Query: 539 LMSFLATVAVTVALFIFIPKGFFPQQDNGVIAGFAESAQDISSSAMHRRLLQVADVVRKD 598 LMSF+AT+A+T LFIFIPKGFFPQQDNGVI GFAESAQD SS+AMH RLL+VA+VVR+D Sbjct: 543 LMSFIATLALTAVLFIFIPKGFFPQQDNGVIVGFAESAQDTSSAAMHERLLKVAEVVRQD 602 Query: 599 PDVTGFAMSAGSTTFNTGNFFIALKPKSEGRTLDASEIITHLRPQVAKIQGVNLFMQASQ 658 PDV GFAMSAGSTTFNTG FFIALKPK +GRT +A EII LRP+VA+I+GVNLFMQASQ Sbjct: 603 PDVIGFAMSAGSTTFNTGQFFIALKPKDQGRTTNADEIIARLRPKVARIEGVNLFMQASQ 662 Query: 659 DINVGGRLSRTQYQYTLTDSNLDELNVWAPKLVDRLRRLKQLTDVASDQQNSAATATITI 718 DINVGGRLSRTQYQYT+TD++LDELNVWAP++++R R+L QLTDVASDQQN AA A ITI Sbjct: 663 DINVGGRLSRTQYQYTITDTDLDELNVWAPRMLERFRQLPQLTDVASDQQNQAAAAVITI 722 Query: 719 DRARASSFGISPALIDATIYDAIGQRQVAQYFTQVNSYRVILEVTPELQKDPALFNKLYL 778 DRARASSFGISP+LIDATIYDAIGQRQVAQYFTQ+NSYRVILEVTP LQKDPALF+KLYL Sbjct: 723 DRARASSFGISPSLIDATIYDAIGQRQVAQYFTQINSYRVILEVTPALQKDPALFDKLYL 782 Query: 779 TSPLTGQQVPLSTFIKVDTTKTAYLSISHQSQFPAVTISFNLAHGVALGEAVDAINQAQA 838 TSPLTGQQVPLSTF+K+DT+KT+YLSISHQSQFPAVTISFNLA GV+LGEAVD I + + Sbjct: 783 TSPLTGQQVPLSTFVKIDTSKTSYLSISHQSQFPAVTISFNLAKGVSLGEAVDVIQKTKD 842 Query: 839 EMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS 898 +MGVP TL G FQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS Sbjct: 843 QMGVPQTLVGNFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS 902 Query: 899 AGVGALLILMAGGYDLSV-----IALIGIIXKKNGIMMIDFALTAERQHGMKPEEAIYQA 953 AGVGALLILMAGGYDLSV I L+ I KKNGIMMIDFALTAER GMKPE+AIYQA Sbjct: 903 AGVGALLILMAGGYDLSVIALIGIILLIGIVKKNGIMMIDFALTAERSQGMKPEQAIYQA 962 Query: 954 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYL 1013 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGL+LSQALTLFTTPVVYL Sbjct: 963 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLILSQALTLFTTPVVYL 1022 Query: 1014 YLDRAHYWYMNKKEARAARKAAR 1036 YLDRAHYWYM KKEAR ARKAAR Sbjct: 1023 YLDRAHYWYMRKKEARQARKAAR 1045 >E6UX88.1 E6UX88_VARPD Acriflavin resistance protein Length = 1058 Score = 1683 bits (4358), Expect = 0.0, Method: Compositional matrix adjust. Identities = 845/1056 (80%), Positives = 947/1056 (89%), Gaps = 9/1056 (0%) Query: 1 VSATFIKRPIGTTLLALAILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN 60 +SA FIKRPIGTTLLALAILLVG AV+PLLPVAPLPQVDFPTIQVSA+LPG SPETMASN Sbjct: 3 ISAGFIKRPIGTTLLALAILLVGAAVFPLLPVAPLPQVDFPTIQVSANLPGASPETMASN 62 Query: 61 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPSN 120 VAQPLERQFSLIAGLSQMTS S LGSTQITLQFDL+RNIDAAALDVQAAI ASTGQLP+N Sbjct: 63 VAQPLERQFSLIAGLSQMTSTSGLGSTQITLQFDLDRNIDAAALDVQAAITASTGQLPAN 122 Query: 121 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQVSDFADNILAQQISQISGVGLVNVNGAQK 180 LP+PP+FRKVNPADSPI+I+SVQS LPLT+V+D+ADNILAQQISQI+GVGLVN+ GAQK Sbjct: 123 LPSPPSFRKVNPADSPILILSVQSKTLPLTEVNDYADNILAQQISQIAGVGLVNIGGAQK 182 Query: 181 PAVRIQVDPAKLATLNLSLEDIRGVIATTTVNQPKGTVDGTHQSFTVYTNDQLLSADPWN 240 PAVR+Q+DPAKLA L LSLED+R V+++ TVN PKGT+DG +QSFTVYTNDQLL A PWN Sbjct: 183 PAVRVQLDPAKLAALGLSLEDVRTVLSSATVNAPKGTIDGPNQSFTVYTNDQLLKAQPWN 242 Query: 241 DMVLAYRAGAPIHVRDIGVAIDAPENMKIAAWAFSGAAAETDTTLTNGRSIVLAITAMP- 299 D++LAYR GAPI VRD+GVAID PEN KIA WA++GAAA T+ NGRSIVLAIT P Sbjct: 243 DVILAYRNGAPIRVRDLGVAIDGPENAKIAGWAYAGAAAPEGNTIQNGRSIVLAITKQPG 302 Query: 300 -RLRAAIPXIKAAMPRLRAAIPASVHVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVIF 358 + + I AAMPRL+A+IP +V VN L+DRTQTIRASV DVEFTL+LTIALVV VIF Sbjct: 303 ANVIETVDRINAAMPRLKASIPPTVEVNALVDRTQTIRASVLDVEFTLLLTIALVVAVIF 362 Query: 359 VFLRNIAATLIPSITVPLAIMGTAAVMYLVGYSLDNLSLMALTIAVGFVVDDAIVMLENI 418 VFLRN+ ATLIPS+TVPLA++GT AVMYL+GYSLDNLSLMALTIAVGFVVDDAIVMLENI Sbjct: 363 VFLRNVPATLIPSVTVPLALLGTVAVMYLLGYSLDNLSLMALTIAVGFVVDDAIVMLENI 422 Query: 419 YRYVEEGMSPMEAALKGSSEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 478 YRYVEEGMSP+EAA KG+ EIGFTIISISVSL+AVFIPLLLMGGIVGRLFREFAVTVTLT Sbjct: 423 YRYVEEGMSPLEAAYKGAGEIGFTIISISVSLIAVFIPLLLMGGIVGRLFREFAVTVTLT 482 Query: 479 IGVSVIISLTLTPMLCSRFLKNSHAEQHGKMYQLFERFFDALLNGYKRGLDLVLRHQFIT 538 I VSV+ISLTLTPMLCSRFLKN HA +HG++Y LFER FDA+LNGYKRGL +VL HQFIT Sbjct: 483 IVVSVVISLTLTPMLCSRFLKNEHARKHGRLYLLFERGFDAMLNGYKRGLHVVLDHQFIT 542 Query: 539 LMSFLATVAVTVALFIFIPKGFFPQQDNGVIAGFAESAQDISSSAMHRRLLQVADVVRKD 598 LM F+ATVA T LF+ IPKGFFPQQD G I+GFAESAQD S ++M+ R+L++ADVVRKD Sbjct: 543 LMVFIATVAATGFLFMVIPKGFFPQQDTGFISGFAESAQDASFASMNARMLELADVVRKD 602 Query: 599 PDVTGFAMSAGSTTFNTGNFFIALKPKSEGRTLDASEIITHLRPQVAKIQGVNLFMQASQ 658 PDV+ F M+ S+TFNTGNF+I LKPK EGRT A EIIT LRPQ+AK+QGVNLF+QA Q Sbjct: 603 PDVSAFGMNGSSSTFNTGNFYINLKPKDEGRTASADEIITRLRPQLAKVQGVNLFLQAGQ 662 Query: 659 DINVGGRLSRTQYQYTLTDSNLDELNVWAPKLVDRLRRLKQLTDVASDQQNSAATATITI 718 DI VGGR SRTQYQYT+TDSNLDELN WAPKL+ R R++ ++TD+ASDQQN+AA+A +TI Sbjct: 663 DIRVGGRSSRTQYQYTVTDSNLDELNTWAPKLLARFRQIPEITDLASDQQNAAASAVLTI 722 Query: 719 DRARASSFGISPALIDATIYDAIGQRQVAQYFTQVNSYRVILEVTPELQKDPALFNKLYL 778 DR RASSFGISP++IDAT+YDAIGQRQVAQYFTQ+NSY V+LEVTPELQKDPALF+KLYL Sbjct: 723 DRDRASSFGISPSVIDATLYDAIGQRQVAQYFTQLNSYHVVLEVTPELQKDPALFSKLYL 782 Query: 779 TSPLTGQQVPLSTFIKVDTTKTAYLSISHQSQFPAVTISFNLAHGVALGEAVDAINQAQA 838 TSPLTGQQVPLSTF+KVDT+KTAYLSISHQ QFPAVTISFNLA G ALG+AV+AIN+AQA Sbjct: 783 TSPLTGQQVPLSTFVKVDTSKTAYLSISHQGQFPAVTISFNLAPGHALGDAVNAINKAQA 842 Query: 839 EMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPS 898 EMG+P +L+GAFQGTA+AF DSLSSQPYLIAAAL+AVYIVLGLLYESYIHPLTILSTLPS Sbjct: 843 EMGIPQSLSGAFQGTAQAFQDSLSSQPYLIAAALVAVYIVLGLLYESYIHPLTILSTLPS 902 Query: 899 AGVGALLILMAGGYDLSV-----IALIGIIXKKNGIMMIDFALTAERQHGMKPEEAIYQA 953 AGVGALLILMAGGYDLSV I L+ I KKNGIMMIDFAL AER+ GM+P+EAIYQA Sbjct: 903 AGVGALLILMAGGYDLSVIALIGIILLIGIVKKNGIMMIDFALKAEREQGMEPKEAIYQA 962 Query: 954 CLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYL 1013 CLLRFRPIMMTTMCALLSGLPLMLGHG+GSELRRPLGYAMVGGL+LSQALTLFTTPVVYL Sbjct: 963 CLLRFRPIMMTTMCALLSGLPLMLGHGSGSELRRPLGYAMVGGLILSQALTLFTTPVVYL 1022 Query: 1014 YLDRAHYWYMNKKEARAARKAARKGGAA--PVIESH 1047 YLDRAH+WY+ +KEAR ARKAA+ G PV E+H Sbjct: 1023 YLDRAHFWYLRRKEARKARKAAKGEGGETPPVAEAH 1058 >Q1LQU0.1 Q1LQU0_RALME Multidrug efflux system, subunit B Length = 1066 Score = 1543 bits (3994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/1052 (74%), Positives = 903/1052 (85%), Gaps = 17/1052 (1%) Query: 1 VSATFIKRPIGTTLLALAILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN 60 +SATFIKRPIGT+LLALA+LLVG+A WPLLP+APLPQVDFPTIQV+ +LPG +PETMASN Sbjct: 3 ISATFIKRPIGTSLLALALLLVGLAAWPLLPIAPLPQVDFPTIQVTVNLPGANPETMASN 62 Query: 61 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPSN 120 VAQPLERQFSLIAGLSQMTS SA G+TQITLQFDLNR+IDAAA+DVQAAINA+ GQLPSN Sbjct: 63 VAQPLERQFSLIAGLSQMTSTSAQGTTQITLQFDLNRSIDAAAVDVQAAINAAGGQLPSN 122 Query: 121 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQVSDFADNILAQQISQISGVGLVNVNGAQK 180 LP PPTFRK+NPAD+PI++++VQSDALPLT V+DFADNILAQQISQI GVGLVN+ G QK Sbjct: 123 LPTPPTFRKINPADAPILVLAVQSDALPLTTVNDFADNILAQQISQIEGVGLVNIGGQQK 182 Query: 181 PAVRIQVDPAKLATLNLSLEDIRGVIATTTVNQPKGTVDGTHQSFTVYTNDQLLSADPWN 240 PAVRIQVDPAKLA++ LS+EDIRGVIA TTVNQP G DG ++F VYTNDQ+ A PWN Sbjct: 183 PAVRIQVDPAKLASMGLSMEDIRGVIAATTVNQPTGATDGATKAFNVYTNDQITRAAPWN 242 Query: 241 DMVLAYRAGAPIHVRDIGVAIDAPENMKIAAWAFSGAAAETDTTLTNGRSIVLAITAMP- 299 DMVLA+R GAP+ VRD+GVA+D PEN ++A WAF+GAAA D T NGR+I+LA+T P Sbjct: 243 DMVLAWRNGAPVRVRDVGVAVDGPENNRLAGWAFAGAAAPADNTFHNGRAIILAVTKQPG 302 Query: 300 -RLRAAIPXIKAAMPRLRAAIPASVHVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVIF 358 + A + IKAA+PRL+ +IPA+V+VN L DRTQ IRAS DVEFTL+LTI LVV +IF Sbjct: 303 ANVIATVDRIKAALPRLQLSIPAAVNVNVLADRTQNIRASEADVEFTLILTIVLVVGIIF 362 Query: 359 VFLRNIAATLIPSITVPLAIMGTAAVMYLVGYSLDNLSLMALTIAVGFVVDDAIVMLENI 418 VFLR++ AT+IPSITVPLA++GTA MYL+GYS DNLSLMALTIAVGFVVDDAIVMLENI Sbjct: 363 VFLRDVWATVIPSITVPLALLGTAGGMYLLGYSRDNLSLMALTIAVGFVVDDAIVMLENI 422 Query: 419 YRYVEEGMSPMEAALKGSSEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 478 YR+VE GMSP+EAAL+G+ EI FTI+SISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT Sbjct: 423 YRHVEAGMSPLEAALQGAGEIAFTIVSISVSLVAVFIPLLLMGGIVGRLFREFAVTVTLT 482 Query: 479 IGVSVIISLTLTPMLCSRFLKN---SHAEQHGKMYQLFERFFDALLNGYKRGLDLVLRHQ 535 I VSVI+SLTLTPM+C++FL+ +HA HG++Y +FER FDA+L Y+RGLD VL HQ Sbjct: 483 IAVSVIVSLTLTPMMCAKFLQPHDPAHARHHGRLYLMFERGFDAMLGAYRRGLDHVLDHQ 542 Query: 536 FITLMSFLATVAVTVALFIFIPKGFFPQQDNGVIAGFAESAQDISSSAMHRRLLQVADVV 595 F+TL FL TVA TV LF+ IPKGFFPQQD G + G AESAQD S +M+ R++ +ADVV Sbjct: 543 FLTLCVFLLTVATTVVLFVIIPKGFFPQQDTGFVFGTAESAQDASFKSMNARMVALADVV 602 Query: 596 RKDPDVTGFAMSAGSTTFNTGNFFIALKPKSEGRTLDASEIITHLRPQVAKIQGVNLFMQ 655 R DPD++ M+ G T NTGNFFIAL+PK EGRT A EII LRP++AK++G NLF+Q Sbjct: 603 RSDPDISAVGMTGGQNTVNTGNFFIALRPKEEGRTATADEIIARLRPKLAKVEGANLFLQ 662 Query: 656 ASQDINVGGRLSRTQYQYTLTDSNLDELNVWAPKLVDRLRRLKQLTDVASDQQNSAATAT 715 A QDINVGGRLSRTQYQYTLTD+NL ELN WAP++++R R+L QL DVASDQQNSAA A Sbjct: 663 AGQDINVGGRLSRTQYQYTLTDANLAELNDWAPRVLERFRQLPQLADVASDQQNSAAAAM 722 Query: 716 ITIDRARASSFGISPALIDATIYDAIGQRQVAQYFTQVNSYRVILEVTPELQKDPALFNK 775 +TIDRARASSFGI+PALIDATIYDAIGQRQVAQYFTQ+NSY V+LE TP+LQ DP LF+K Sbjct: 723 LTIDRARASSFGITPALIDATIYDAIGQRQVAQYFTQINSYHVVLEATPQLQDDPRLFDK 782 Query: 776 LYLTSPLTGQQVPLSTFIKVDTTKTAYLSISHQSQFPAVTISFNLAHGVALGEAVDAINQ 835 LYLTSP+TG+QVPLS+F+K+DT +TAYL+I HQ QFPAVTISFNLA G +LG+AV+AIN+ Sbjct: 783 LYLTSPITGEQVPLSSFVKIDTNRTAYLAIGHQGQFPAVTISFNLAQGASLGDAVEAINK 842 Query: 836 AQAEMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILST 895 A A MG P TL GAFQGTA+AFG SL+SQPYLIAAALIAVYIVLGLLYESYIHPLTILST Sbjct: 843 ALAGMGRPRTLGGAFQGTAQAFGASLASQPYLIAAALIAVYIVLGLLYESYIHPLTILST 902 Query: 896 LPSAGVGALLILMAGGYDLSV-----IALIGIIXKKNGIMMIDFALTAERQHGMKPEEAI 950 LPSAGVGALL+LM GGYD +V I L+ I KKNGIMM+DFAL AER+ GM P +AI Sbjct: 903 LPSAGVGALLVLMLGGYDFTVIALIGIILLIGIVKKNGIMMVDFALVAERERGMSPRDAI 962 Query: 951 YQACLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPV 1010 Y+ACLLRFRPIMMTTMCALL+GLPLMLGHGAGSELRRPLGYAMVGGLV+SQ LTLF+TPV Sbjct: 963 YEACLLRFRPIMMTTMCALLAGLPLMLGHGAGSELRRPLGYAMVGGLVVSQMLTLFSTPV 1022 Query: 1011 VYLYLDRAHYWYMNKKEARAARKAARKGGAAP 1042 VYLYLDRAHYWYM RKAAR GG P Sbjct: 1023 VYLYLDRAHYWYMR-------RKAARGGGKPP 1047 >A7IFQ1.1 A7IFQ1_XANP2 Acriflavin resistance protein Length = 1044 Score = 1344 bits (3478), Expect = 0.0, Method: Compositional matrix adjust. Identities = 673/1039 (64%), Positives = 828/1039 (79%), Gaps = 26/1039 (2%) Query: 1 VSATFIKRPIGTTLLALAILLVGIAVWPLLPVAPLPQVDFPTIQVSASLPGGSPETMASN 60 +SA FI RPI TTLL A++LVG + +LPVAPLPQVDFPTIQVSASLPG SPETMAS+ Sbjct: 3 ISAPFIHRPIATTLLMAALVLVGAVAYAMLPVAPLPQVDFPTIQVSASLPGASPETMASS 62 Query: 61 VAQPLERQFSLIAGLSQMTSQSALGSTQITLQFDLNRNIDAAALDVQAAINASTGQLPSN 120 V+ PLERQFS I+G++QMTS SALG T IT+QFDLNRNIDAAA DVQ+AINA+ GQLP N Sbjct: 63 VSTPLERQFSQISGVTQMTSTSALGVTSITVQFDLNRNIDAAAQDVQSAINAAAGQLPKN 122 Query: 121 LPNPPTFRKVNPADSPIMIMSVQSDALPLTQVSDFADNILAQQISQISGVGLVNVNGAQK 180 LP+PPTFRKVNPAD+PI+I+SVQSD PLT++ D AD ILAQQISQI+G+ V + G QK Sbjct: 123 LPSPPTFRKVNPADAPILILSVQSDLYPLTKLDDAADTILAQQISQIAGIAQVAITGEQK 182 Query: 181 PAVRIQVDPAKLATLNLSLEDIRGVIATTTVNQPKGTVDGTHQSFTVYTNDQLLSADPWN 240 PAVR+QVDP+K+A L +SLED+R V+A TV+QPKG+ DG Q FT+Y +DQLL+A PWN Sbjct: 183 PAVRVQVDPSKIAALGMSLEDVRAVLAAATVDQPKGSFDGAAQGFTIYADDQLLAATPWN 242 Query: 241 DMVLAYRAGAPIHVRDIGVAIDAPENMKIAAWAFSGAAAETDTTLTNG-RSIVLAITAMP 299 ++V+AYR GAP+ +RDIG A+D PEN ++A+W NG R I L + P Sbjct: 243 EVVVAYRNGAPVRIRDIGRAVDGPENARLASW-------------QNGKRGIQLIVFKQP 289 Query: 300 --RLRAAIPXIKAAMPRLRAAIPASVHVNTLIDRTQTIRASVEDVEFTLVLTIALVVMVI 357 + + ++A +PRL AA+P ++V + DRTQTIRASVEDV+FT++LTIALVV VI Sbjct: 290 GANVIETVDRVRAMIPRLEAALPPGINVEIIADRTQTIRASVEDVQFTMLLTIALVVGVI 349 Query: 358 FVFLRNIAATLIPSITVPLAIMGTAAVMYLVGYSLDNLSLMALTIAVGFVVDDAIVMLEN 417 F FLRN+ AT+IPS+TVP+A++GT AVMY++GYS+DNLSLM LTIAVGFVVDDAIVMLEN Sbjct: 350 FAFLRNLWATVIPSVTVPMALIGTFAVMYVLGYSIDNLSLMGLTIAVGFVVDDAIVMLEN 409 Query: 418 IYRYVEEGMSPMEAALKGSSEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAVTVTL 477 +YR++EEG+ P +AALKG+ EIGFTIISIS+SLVAVFIP+L+MGGIVGRL REFAVTVT+ Sbjct: 410 VYRHIEEGLPPFQAALKGAGEIGFTIISISLSLVAVFIPVLMMGGIVGRLLREFAVTVTI 469 Query: 478 TIGVSVIISLTLTPMLCSRFLKNSHAEQHGKMYQLFERFFDALLNGYKRGLDLVLRHQFI 537 TI VSV++SLTLTPM+C+ FLKN H +HG+ Y E FFD +L Y GL VL+HQF Sbjct: 470 TILVSVVVSLTLTPMMCALFLKNDHGAKHGRAYMAAEAFFDGMLKVYDTGLKWVLKHQFA 529 Query: 538 TLMSFLATVAVTVALFIFIPKGFFPQQDNGVIAGFAESAQDISSSAMHRRLLQVADVVRK 597 TLMS T+A T L++ IPKGFFPQQD G I GF+E+ QDIS +AM ++ + + VV + Sbjct: 530 TLMSLFVTMAATGYLYVVIPKGFFPQQDTGFIQGFSEAGQDISFAAMTQKQMALMAVVAR 589 Query: 598 DPDVTGFAMSAGST----TFNTGNFFIALKPKSEGRTLDASEIITHLRPQVAKIQGVNLF 653 DP V + +AG+T T NTG +I LKP++E R A ++I LRPQ+AK++G+ LF Sbjct: 590 DPAVEAVSGAAGATGGSQTVNTGRVWITLKPRNE-RDASADQVIARLRPQLAKVEGIALF 648 Query: 654 MQASQDINVGGRLSRTQYQYTLTDSNLDELNVWAPKLVDRLRRLKQLTDVASDQQNSAAT 713 +QASQDINVGGR SRTQYQYTL D+NLDELN W P+++ +LR L QL DVA+DQQ +A T Sbjct: 649 LQASQDINVGGRPSRTQYQYTLQDANLDELNAWGPRMLAKLRALPQLQDVATDQQTNAPT 708 Query: 714 ATITIDRARASSFGISPALIDATIYDAIGQRQVAQYFTQVNSYRVILEVTPELQKDPALF 773 ++TIDR A+ FGI P +ID T+YDA GQRQVAQYFTQ++ Y VILEV P LQ DP+ Sbjct: 709 VSLTIDRDTAARFGILPQVIDDTLYDAFGQRQVAQYFTQLSQYHVILEVDPTLQGDPSAL 768 Query: 774 NKLYLTSPLTGQQVPLSTFIKVDTTKTAYLSISHQSQFPAVTISFNLAHGVALGEAVDAI 833 KLY+ SP TG+++PLS F+KVDT+K+AYLSISHQ QFPAVT+SFNL+ G ALG+AVDAI Sbjct: 769 EKLYVRSPRTGEEIPLSAFVKVDTSKSAYLSISHQGQFPAVTLSFNLSPGTALGQAVDAI 828 Query: 834 NQAQAEMGVPTTLTGAFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTIL 893 QA+ EMG+P TL G FQGTA+AF +SLSSQPYLI AA+IAVYI+LG+LYESYIHPLTIL Sbjct: 829 KQAEREMGMPATLIGTFQGTAQAFQNSLSSQPYLILAAIIAVYIILGVLYESYIHPLTIL 888 Query: 894 STLPSAGVGALLILMAGGYDLSVIA-----LIGIIXKKNGIMMIDFALTAERQHGMKPEE 948 S+LPSAGVGALLIL GYDLSVIA L+ I KKN IMMIDFAL ER+ GM PEE Sbjct: 889 SSLPSAGVGALLILYLFGYDLSVIALIGILLLIGIVKKNAIMMIDFALAREREEGMAPEE 948 Query: 949 AIYQACLLRFRPIMMTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTT 1008 +IYQACL+RFRPIMMTTM ALL GLPLMLG G GSELRRPLG+A+VGGL++SQ LTL+TT Sbjct: 949 SIYQACLIRFRPIMMTTMAALLGGLPLMLGTGTGSELRRPLGFAIVGGLLVSQVLTLYTT 1008 Query: 1009 PVVYLYLDRAHYWYMNKKE 1027 PVVYLY++R ++ +++ Sbjct: 1009 PVVYLYMNRLQRFFADRRR 1027