BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0002.p         (82 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A1WET0.1 A1WET0_VEREI RND efflux system, outer membrane lipoprot...   117   5e-25
D8IWG0.1 D8IWG0_HERSS Outer membrane channel lipoprotein              112   3e-23
E6UX90.1 E6UX90_VARPD RND efflux system, outer membrane lipoprot...   100   5e-20
Q9I0V8.1 Q9I0V8_PSEAE Probable outer membrane protein                  80   8e-14
Q02MX4.1 Q02MX4_PSEAB Putative outer membrane protein                  80   8e-14

>A1WET0.1 A1WET0_VEREI RND efflux system, outer membrane lipoprotein, NodT
           family
          Length = 478

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 70/77 (90%)

Query: 1   VQNQAVKAAQLSERLALSQYQAGTTTYLSVVTTQAASLTNQRTAVTLLGRQLVASVALIK 60
           VQ+QAVKAAQLSERLA+SQYQAGT+TYLSV+TTQAASL NQR AV LLGRQL+ASV+LIK
Sbjct: 401 VQDQAVKAAQLSERLAMSQYQAGTSTYLSVLTTQAASLANQRGAVQLLGRQLLASVSLIK 460

Query: 61  ATGGGWTVADIDKVAAS 77
           A GGGW  +D+++ AA+
Sbjct: 461 AVGGGWHASDMNQAAAN 477


>D8IWG0.1 D8IWG0_HERSS Outer membrane channel lipoprotein
          Length = 510

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/66 (86%), Positives = 62/66 (93%)

Query: 1   VQNQAVKAAQLSERLALSQYQAGTTTYLSVVTTQAASLTNQRTAVTLLGRQLVASVALIK 60
           VQ QAV++AQL+ERLA+ QY+AGT TYLSVVTTQAASLTNQR AVTLLGRQLVASVALIK
Sbjct: 438 VQAQAVQSAQLAERLAMRQYEAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVASVALIK 497

Query: 61  ATGGGW 66
           ATGGGW
Sbjct: 498 ATGGGW 503


>E6UX90.1 E6UX90_VARPD RND efflux system, outer membrane lipoprotein, NodT
           family
          Length = 492

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/70 (74%), Positives = 59/70 (84%)

Query: 1   VQNQAVKAAQLSERLALSQYQAGTTTYLSVVTTQAASLTNQRTAVTLLGRQLVASVALIK 60
           +Q QAV+A+QL+ERLALSQY+AGT TYLSVVT Q  SLTNQRTA  +LGRQL ASV+LI 
Sbjct: 418 LQAQAVQASQLAERLALSQYRAGTATYLSVVTAQQFSLTNQRTAAQVLGRQLAASVSLIA 477

Query: 61  ATGGGWTVAD 70
           ATGGGWT  D
Sbjct: 478 ATGGGWTATD 487


>Q9I0V8.1 Q9I0V8_PSEAE Probable outer membrane protein
          Length = 498

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 55/73 (75%)

Query: 1   VQNQAVKAAQLSERLALSQYQAGTTTYLSVVTTQAASLTNQRTAVTLLGRQLVASVALIK 60
           VQ +A+++A+ + RLA +QY+AGT  Y  VVT QA +L+N+RT +TLLG +L ASV LI 
Sbjct: 410 VQREALESAREALRLAENQYKAGTVDYTDVVTNQATALSNERTVLTLLGSRLTASVQLIA 469

Query: 61  ATGGGWTVADIDK 73
           A GGGW  ADI++
Sbjct: 470 AMGGGWDSADIER 482


>Q02MX4.1 Q02MX4_PSEAB Putative outer membrane protein
          Length = 498

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 55/73 (75%)

Query: 1   VQNQAVKAAQLSERLALSQYQAGTTTYLSVVTTQAASLTNQRTAVTLLGRQLVASVALIK 60
           VQ +A+++A+ + RLA +QY+AGT  Y  VVT QA +L+N+RT +TLLG +L ASV LI 
Sbjct: 410 VQREALESAREALRLAENQYKAGTVDYTDVVTNQATALSNERTVLTLLGSRLTASVQLIA 469

Query: 61  ATGGGWTVADIDK 73
           A GGGW  ADI++
Sbjct: 470 AMGGGWDSADIER 482