BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0315.p         (163 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IRF9.1 D8IRF9_HERSS NADH dehydrogenase I (Chain E) oxidoreduct...   311   2e-83
A4G640.1 A4G640_HERAR NADH-quinone oxidoreductase subunit E (NAD...   275   1e-72
F1W486.1 F1W486_9BURK NADH-ubiquinone oxidoreductase chain E          254   3e-66
A6SY09.1 A6SY09_JANMA NADH dehydrogenase I chain E EC=1.6.5.3         252   2e-65
B1GAD9.1 B1GAD9_9BURK NADH-quinone oxidoreductase, E subunit EC=...   239   1e-61

>D8IRF9.1 D8IRF9_HERSS NADH dehydrogenase I (Chain E) oxidoreductase protein
           EC=1.6.5.3
          Length = 159

 Score =  311 bits (798), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 146/159 (91%), Positives = 154/159 (96%)

Query: 5   MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64
           MLLSQ+ALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV
Sbjct: 1   MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 60

Query: 65  QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124
           QEVATFYNMFNTS  GKHKITVCTNLPCLLSGG+RAAHHLK  LG+ Y+ETTADGQFT++
Sbjct: 61  QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKQKLGIDYRETTADGQFTLM 120

Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163
           EGECMGACGDAPVMLVNNH+MCSWMSN+KIDALLEELKK
Sbjct: 121 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 159


>A4G640.1 A4G640_HERAR NADH-quinone oxidoreductase subunit E (NADH
           dehydrogenase I subunit E) (NDH-1 subunit E) EC=1.6.99.5
          Length = 159

 Score =  275 bits (704), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 124/159 (77%), Positives = 146/159 (91%)

Query: 5   MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64
           MLLS+ A KKIDRE+AK+PADQ+QSAVM+AL IAQ E GWLP E+ QE+ADY+GMPA+AV
Sbjct: 1   MLLSEQAYKKIDREIAKFPADQKQSAVMAALAIAQDETGWLPPEVMQEVADYLGMPAIAV 60

Query: 65  QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124
           QEVATFYNM++T   GKHKI+VCTNLPCLLSGG+RAAH+LKH LG+ Y+ETTADGQFT++
Sbjct: 61  QEVATFYNMYDTKPVGKHKISVCTNLPCLLSGGERAAHYLKHKLGIDYRETTADGQFTLI 120

Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163
           EGECMGACGDAPVM+VNN RMCS+MS+DKIDAL+EELKK
Sbjct: 121 EGECMGACGDAPVMIVNNKRMCSFMSDDKIDALVEELKK 159


>F1W486.1 F1W486_9BURK NADH-ubiquinone oxidoreductase chain E
          Length = 159

 Score =  254 bits (649), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 119/159 (74%), Positives = 134/159 (84%)

Query: 5   MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64
           MLLS+ A KKIDRE++K+PADQ+QSAVM AL IAQ E GWL   L QEIADY+GM  +AV
Sbjct: 1   MLLSELAYKKIDREVSKFPADQKQSAVMGALAIAQDEAGWLSPPLMQEIADYLGMAPIAV 60

Query: 65  QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124
           QEVA FY M+NTS  GK KITVCTNLPC LSGG++AA +LK  LG+ Y+ETTADGQFT+ 
Sbjct: 61  QEVAAFYEMYNTSPTGKFKITVCTNLPCALSGGEKAARYLKQKLGIDYRETTADGQFTLR 120

Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163
           EGECMGACGDAPVMLVNN RMCSWMSNDKID L+EELKK
Sbjct: 121 EGECMGACGDAPVMLVNNKRMCSWMSNDKIDDLVEELKK 159


>A6SY09.1 A6SY09_JANMA NADH dehydrogenase I chain E EC=1.6.5.3
          Length = 159

 Score =  252 bits (643), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 114/159 (71%), Positives = 138/159 (86%)

Query: 5   MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64
           MLLS+   K+IDRE+AK+P DQ+QSAVM+AL+IAQ E  WLP E+ Q++ADY+GMPA+AV
Sbjct: 1   MLLSEQTYKRIDREVAKFPPDQKQSAVMAALQIAQDETRWLPPEVMQDVADYLGMPAIAV 60

Query: 65  QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124
           QEVATFYNM+NT   GK KI+VCTNLPC LSGG++AAH+LK  LG+ Y+ETT D  FT+V
Sbjct: 61  QEVATFYNMYNTKPVGKFKISVCTNLPCQLSGGEKAAHYLKQKLGIDYRETTDDDLFTLV 120

Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163
           EGECMGACGDAPVMLVNN RMCS+MS++KIDAL+EELKK
Sbjct: 121 EGECMGACGDAPVMLVNNKRMCSFMSDEKIDALVEELKK 159


>B1GAD9.1 B1GAD9_9BURK NADH-quinone oxidoreductase, E subunit EC=1.6.99.5
          Length = 161

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/161 (70%), Positives = 131/161 (81%), Gaps = 3/161 (1%)

Query: 6   LLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAVQ 65
           ++S + LK+IDR +AKYPADQ+QSAVMSAL  AQ EHGWL  EL Q +ADY+GMPAVAVQ
Sbjct: 1   MISAEGLKEIDRAIAKYPADQKQSAVMSALATAQEEHGWLSPELMQFVADYLGMPAVAVQ 60

Query: 66  EVATFYNMFNTSQQGKHKITVCTNLPCLL---SGGDRAAHHLKHTLGVGYKETTADGQFT 122
           EVATFY M+ TS  GKHKIT+CTNLPC L    G D AA +LK  LG+ + ETTADG+FT
Sbjct: 61  EVATFYTMYETSPVGKHKITLCTNLPCQLGPDGGSDSAAEYLKQKLGIDFGETTADGKFT 120

Query: 123 IVEGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163
           + EGECMG+CGDAPVMLVNNHRMCS+MS +KID LLEEL K
Sbjct: 121 LKEGECMGSCGDAPVMLVNNHRMCSFMSREKIDQLLEELSK 161