BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0310.p         (65 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IRF5.1 D8IRF5_HERSS NADH-quinone oxidoreductase subunit EC=1.6...   126   1e-27
F1VU57.1 F1VU57_9BURK NADH ubiquinone oxidoreductase chain A          124   3e-27
B5WKM6.1 B5WKM6_9BURK NADH-quinone oxidoreductase subunit EC=1.6...   111   4e-23
B1XUJ8.1 NUOA_POLNS NADH-quinone oxidoreductase subunit A EC=1.6...   111   4e-23
B2JDM8.1 NUOA_BURP8 NADH-quinone oxidoreductase subunit A EC=1.6...   110   5e-23

>D8IRF5.1 D8IRF5_HERSS NADH-quinone oxidoreductase subunit EC=1.6.99.5
          Length = 119

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/65 (92%), Positives = 64/65 (98%)

Query: 1   MKFDVRYYLVAILFILFDLETAFFFPWGVSMRDLGWSGYITMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYL+AILFILFDLETAFFFPWGVSMR+LGW G++TMMVFIAEFVVGFWYIWKKG
Sbjct: 55  MKFDVRYYLIAILFILFDLETAFFFPWGVSMRELGWQGFVTMMVFIAEFVVGFWYIWKKG 114

Query: 61  ALDWE 65
           ALDWE
Sbjct: 115 ALDWE 119


>F1VU57.1 F1VU57_9BURK NADH ubiquinone oxidoreductase chain A
          Length = 119

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/65 (90%), Positives = 64/65 (98%)

Query: 1   MKFDVRYYLVAILFILFDLETAFFFPWGVSMRDLGWSGYITMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYLVAILFILFDLETAFFFPWGV+MRDLGW+G++TM+VFIAEF VGFWYIWKKG
Sbjct: 55  MKFDVRYYLVAILFILFDLETAFFFPWGVAMRDLGWAGFVTMLVFIAEFAVGFWYIWKKG 114

Query: 61  ALDWE 65
           ALDWE
Sbjct: 115 ALDWE 119


>B5WKM6.1 B5WKM6_9BURK NADH-quinone oxidoreductase subunit EC=1.6.99.5
          Length = 133

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 60/65 (92%)

Query: 1   MKFDVRYYLVAILFILFDLETAFFFPWGVSMRDLGWSGYITMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYLVAILFI+FDLETAF FPWGV++RD+GW+G+I MM+F+ EF++GF YIWKKG
Sbjct: 69  MKFDVRYYLVAILFIIFDLETAFLFPWGVALRDVGWAGFIAMMIFLLEFLLGFAYIWKKG 128

Query: 61  ALDWE 65
            LDWE
Sbjct: 129 GLDWE 133


>B1XUJ8.1 NUOA_POLNS NADH-quinone oxidoreductase subunit A EC=1.6.99.5
          Length = 119

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 60/65 (92%)

Query: 1   MKFDVRYYLVAILFILFDLETAFFFPWGVSMRDLGWSGYITMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYL+AILFILFDLETAF FPWGV++RD+GW GY +M++F+ EF+VGF YIWKKG
Sbjct: 55  MKFDVRYYLIAILFILFDLETAFLFPWGVALRDIGWLGYASMVIFLLEFIVGFVYIWKKG 114

Query: 61  ALDWE 65
           ALDWE
Sbjct: 115 ALDWE 119


>B2JDM8.1 NUOA_BURP8 NADH-quinone oxidoreductase subunit A EC=1.6.99.5
          Length = 123

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 60/65 (92%)

Query: 1   MKFDVRYYLVAILFILFDLETAFFFPWGVSMRDLGWSGYITMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYLVAILFI+FDLETAF FPWGV++RD+GW G+I+MM+F+ EF++GF YIWKKG
Sbjct: 59  MKFDVRYYLVAILFIIFDLETAFLFPWGVALRDIGWPGFISMMIFLLEFLLGFAYIWKKG 118

Query: 61  ALDWE 65
            LDWE
Sbjct: 119 GLDWE 123