BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0309.p         (92 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G645.1 A4G645_HERAR Preprotein translocase SecG subunit             101   5e-20
A6SY04.1 A6SY04_JANMA Preprotein translocase SecG subunit              95   3e-18
D6CVD8.1 D6CVD8_THIS3 Putative Preprotein translocase SecG subunit     79   2e-13
D5X432.1 D5X432_THIK1 Preprotein translocase, SecG subunit             79   2e-13
D5W5X8.1 D5W5X8_BURSC Preprotein translocase, SecG subunit             79   3e-13

>A4G645.1 A4G645_HERAR Preprotein translocase SecG subunit
          Length = 132

 Score =  101 bits (251), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 72/100 (72%), Gaps = 8/100 (8%)

Query: 1   MGAAFGSGASGSLFGATGSSNFLSKSTGIAAAIFFAATLALAFVGNHHVSQSGGVMDNLP 60
           MGA+FGSGASGSLFGATGSSNFLSK TG+AAAIFFAATL LAF+ N     S GVM+NLP
Sbjct: 33  MGASFGSGASGSLFGATGSSNFLSKFTGVAAAIFFAATLGLAFISNKPAQTSAGVMENLP 92

Query: 61  APAAAIPATPAAS--GAPA----AAPANPADQS--NQIPK 92
             A     T +A   GAPA     APA+P+++   NQIPK
Sbjct: 93  VSAVPGAETKSAEVPGAPANVQPVAPASPSEKEHANQIPK 132


>A6SY04.1 A6SY04_JANMA Preprotein translocase SecG subunit
          Length = 128

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/104 (58%), Positives = 67/104 (64%), Gaps = 20/104 (19%)

Query: 1   MGAAFGSGASGSLFGATGSSNFLSKSTGIAAAIFFAATLALAFVGNHHVSQSGGVMDNLP 60
           MGA+FGSGASGSLFGATGSSNFLSK TG+AA IFF+ATL LAF+GN   + S GVM+NLP
Sbjct: 33  MGASFGSGASGSLFGATGSSNFLSKFTGVAAVIFFSATLGLAFIGNKPATPSAGVMENLP 92

Query: 61  APAAAIPA------------TPAASGAPAAAPANPADQSNQIPK 92
           A A    A            TP A G  A        QSNQIPK
Sbjct: 93  ASAVPGAAAPAQTAPAAAPETPVAPGGSA--------QSNQIPK 128


>D6CVD8.1 D6CVD8_THIS3 Putative Preprotein translocase SecG subunit
          Length = 141

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 15/98 (15%)

Query: 1   MGAAFGSGASGSLFGATGSSNFLSKSTGIAAAIFFAATLALAFVGNHHVSQSGGVMDNL- 59
           MGA+FGSGASGSLFGATGS+NFLS+ST +AA +FF  TL +A+ GN   S  GG+M+ L 
Sbjct: 33  MGASFGSGASGSLFGATGSANFLSRSTAVAATLFFVTTLMMAYFGNRANSGDGGLMEKLA 92

Query: 60  -------------PA-PAAAIPATPAASGAPAAAPANP 83
                        PA P + IP  P+A    + A   P
Sbjct: 93  APAPVASVAAPAKPAGPISEIPGVPSAVSKASQATTQP 130


>D5X432.1 D5X432_THIK1 Preprotein translocase, SecG subunit
          Length = 141

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 15/98 (15%)

Query: 1   MGAAFGSGASGSLFGATGSSNFLSKSTGIAAAIFFAATLALAFVGNHHVSQSGGVMDNL- 59
           MGA+FGSGASGSLFGATGS+NFLS+ST +AA +FF  TL +A+ GN   S  GG+M+ L 
Sbjct: 33  MGASFGSGASGSLFGATGSANFLSRSTAVAATLFFVTTLMMAYFGNRANSGDGGLMEKLA 92

Query: 60  -------------PA-PAAAIPATPAASGAPAAAPANP 83
                        PA P + IP  P+A    + A   P
Sbjct: 93  APAPVASVAAPAKPAGPISEIPGVPSAVSKASQATTQP 130


>D5W5X8.1 D5W5X8_BURSC Preprotein translocase, SecG subunit
          Length = 131

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/56 (69%), Positives = 48/56 (85%)

Query: 1  MGAAFGSGASGSLFGATGSSNFLSKSTGIAAAIFFAATLALAFVGNHHVSQSGGVM 56
          MGAAFGSGASGSLFGATGS+NFLS++T + AA+FFA TLAL ++G +HV  S GV+
Sbjct: 33 MGAAFGSGASGSLFGATGSANFLSRTTAVLAALFFATTLALTYLGAYHVKPSAGVL 88