BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0297.p         (89 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IR06.1 D8IR06_HERSS 30S ribosomal protein S15                       166   9e-40
F1VU52.1 F1VU52_9BURK SSU ribosomal protein S15p (S13e)               161   3e-38
A4G648.1 RS15_HERAR 30S ribosomal protein S15                         159   2e-37
A6SY01.1 RS15_JANMA 30S ribosomal protein S15                         157   7e-37
C3X6W0.1 C3X6W0_OXAFO 30S ribosomal protein S15                       146   8e-34

>D8IR06.1 D8IR06_HERSS 30S ribosomal protein S15
          Length = 89

 Score =  166 bits (421), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 82/89 (92%), Positives = 84/89 (94%)

Query: 1  MSIEKTAKAAIITDNARGQNDTGSPEVQVALLTARINDLNGHFKEHSKDHHSRRGLIKMV 60
          MSIEK AKAAII++NARG NDTGSPEVQVALLTARINDLNGHFK H KDHHSRRGLIKMV
Sbjct: 1  MSIEKAAKAAIISENARGTNDTGSPEVQVALLTARINDLNGHFKAHVKDHHSRRGLIKMV 60

Query: 61 NRRKSLLSYLKGKDADRYRALIEKLGLRK 89
          NRRKSLLSYLK KDADRYRALIEKLGLRK
Sbjct: 61 NRRKSLLSYLKNKDADRYRALIEKLGLRK 89


>F1VU52.1 F1VU52_9BURK SSU ribosomal protein S15p (S13e)
          Length = 89

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/89 (87%), Positives = 84/89 (94%)

Query: 1  MSIEKTAKAAIITDNARGQNDTGSPEVQVALLTARINDLNGHFKEHSKDHHSRRGLIKMV 60
          MS+EK++KAAII DNARG NDTGSPEVQVALLTARIN+LNGHFK H+KDHHSRRGLI MV
Sbjct: 1  MSMEKSSKAAIIADNARGLNDTGSPEVQVALLTARINELNGHFKAHAKDHHSRRGLIMMV 60

Query: 61 NRRKSLLSYLKGKDADRYRALIEKLGLRK 89
          NRRKSLLSYLKGKDA RYR+LIEKLGLRK
Sbjct: 61 NRRKSLLSYLKGKDATRYRSLIEKLGLRK 89


>A4G648.1 RS15_HERAR 30S ribosomal protein S15
          Length = 89

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/89 (87%), Positives = 81/89 (91%)

Query: 1  MSIEKTAKAAIITDNARGQNDTGSPEVQVALLTARINDLNGHFKEHSKDHHSRRGLIKMV 60
          MS+EKT+KAAI+ DNARG NDTGSPEVQVALLTARINDLNGHFK HSKDHHSRRGLI MV
Sbjct: 1  MSLEKTSKAAIVADNARGANDTGSPEVQVALLTARINDLNGHFKAHSKDHHSRRGLIMMV 60

Query: 61 NRRKSLLSYLKGKDADRYRALIEKLGLRK 89
          NRRKSLLSYLK KDA RYR LI KLGLRK
Sbjct: 61 NRRKSLLSYLKNKDATRYRDLIAKLGLRK 89


>A6SY01.1 RS15_JANMA 30S ribosomal protein S15
          Length = 89

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 76/89 (85%), Positives = 81/89 (91%)

Query: 1  MSIEKTAKAAIITDNARGQNDTGSPEVQVALLTARINDLNGHFKEHSKDHHSRRGLIKMV 60
          MS+EK +KAAI+ DNARGQNDTGSPEVQVALLTARIN+LN HFK H+KDHHSRRGLI MV
Sbjct: 1  MSLEKASKAAIVADNARGQNDTGSPEVQVALLTARINELNSHFKAHTKDHHSRRGLIMMV 60

Query: 61 NRRKSLLSYLKGKDADRYRALIEKLGLRK 89
          NRRKSLLSYLKGKDA RYR LI KLGLRK
Sbjct: 61 NRRKSLLSYLKGKDATRYRDLIVKLGLRK 89


>C3X6W0.1 C3X6W0_OXAFO 30S ribosomal protein S15
          Length = 89

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 71/89 (79%), Positives = 79/89 (88%)

Query: 1  MSIEKTAKAAIITDNARGQNDTGSPEVQVALLTARINDLNGHFKEHSKDHHSRRGLIKMV 60
          M++ K  KAAI+T+NAR QNDTGSPEVQVALLTARINDLNGHFK H+KDHHSRRGLIKMV
Sbjct: 1  MALLKEDKAAIVTENARSQNDTGSPEVQVALLTARINDLNGHFKVHTKDHHSRRGLIKMV 60

Query: 61 NRRKSLLSYLKGKDADRYRALIEKLGLRK 89
          NRRK LL+YL+ KD +RYR LI KLGLRK
Sbjct: 61 NRRKDLLAYLRKKDINRYRELIAKLGLRK 89