BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0248.p         (107 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IQY1.1 D8IQY1_HERSS Putative uncharacterized protein                 89   3e-16

>D8IQY1.1 D8IQY1_HERSS Putative uncharacterized protein
          Length = 115

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 14/114 (12%)

Query: 2   KLIKVI-GAALAIGAVGLAISACQKKEETPGPAETMGKQIDSAVKNAGDQAAVVADKAQE 60
           K+ K++ G  +++ A+ L ++ACQKKEE PGPAE +GK+ID AV++AG +   V  +A++
Sbjct: 3   KMSKLLAGVVMSVAAISL-LAACQKKEE-PGPAEALGKKIDGAVQDAGKKLDEVTGQAKD 60

Query: 61  KAAEAGQKLDKAVD-----------DMKEGAKDLTQKAGEKMEAAGQKIQDTAK 103
           ++ ++G KLD A+D             KEGAKDL QK GEKME AGQKIQD +K
Sbjct: 61  QSEQSGSKLDNALDKAKADAKEAYEKTKEGAKDLAQKTGEKMEEAGQKIQDASK 114