BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0208.p (219 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQW5.1 D8IQW5_HERSS ABC-type proline/glycine betaine transport... 313 1e-83 F2LMT4.1 F2LMT4_BURGA Amino acid ABC transporter, permease protein 277 6e-73 Q39LS2.1 Q39LS2_BURS3 ABC glycinebetaine/carnitine/choline trans... 265 3e-69 B4EPP8.1 B4EPP8_BURCJ Putative binding-protein-dependent transpo... 264 6e-69 A2W4N8.1 A2W4N8_9BURK Amino acid ABC transporter, permease protein 263 9e-69 >D8IQW5.1 D8IQW5_HERSS ABC-type proline/glycine betaine transport system, permease component protein Length = 237 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 157/188 (83%), Positives = 172/188 (91%) Query: 2 LAVAGLIQWIGMDVITQYRSDLIYYTGKHLQLVAWSMLLAIATGVPAGVVLSRPALGRRA 61 L +AGL+ WIG DVI +YR DLIYYTGKHL+LV SMLLA+ATG+PAG+ LSRP R A Sbjct: 16 LVLAGLVWWIGPDVIQKYRGDLIYYTGKHLELVFTSMLLALATGIPAGIALSRPGAQRSA 75 Query: 62 EYFIQVFNIGNTIPSIAVLALALAFFGIGNWPTILALWLASLLPIVRNTFEGLKNVPAPL 121 E FIQ+FNIGNTIPSIAVLALALAFFGIGN PTILALWLASLLPIVRNT+EGLKNVPA + Sbjct: 76 EKFIQIFNIGNTIPSIAVLALALAFFGIGNGPTILALWLASLLPIVRNTYEGLKNVPAAM 135 Query: 122 REAAKGIGMKPYQVLLRVELPNALPIIVGGIRTALVINVGTAPLSMLIGGESLGGLIFPG 181 +EAA+GIGMKP+Q+LLRVELPNALPIIVGG+RTAL INVGTAPLSMLIGGESLGGLIFPG Sbjct: 136 KEAARGIGMKPHQILLRVELPNALPIIVGGVRTALAINVGTAPLSMLIGGESLGGLIFPG 195 Query: 182 IYLNNHGQ 189 IYLNNHGQ Sbjct: 196 IYLNNHGQ 203 >F2LMT4.1 F2LMT4_BURGA Amino acid ABC transporter, permease protein Length = 238 Score = 277 bits (709), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 140/194 (72%), Positives = 164/194 (84%) Query: 11 IGMDVITQYRSDLIYYTGKHLQLVAWSMLLAIATGVPAGVVLSRPALGRRAEYFIQVFNI 70 IG D Q+ DL+YYTG+HL LV SM+LAIA G+PAGV LSRPAL R+AE F+QVFNI Sbjct: 26 IGADTWRQHSGDLVYYTGRHLMLVGCSMVLAIAVGIPAGVALSRPALARQAERFMQVFNI 85 Query: 71 GNTIPSIAVLALALAFFGIGNWPTILALWLASLLPIVRNTFEGLKNVPAPLREAAKGIGM 130 GNT+PS+AVLA+AL FGIG+ P I+AL+LASLLPI RN +EG++NVPA LREAA+GIGM Sbjct: 86 GNTVPSLAVLAIALGIFGIGDMPAIVALFLASLLPITRNAYEGMRNVPASLREAARGIGM 145 Query: 131 KPYQVLLRVELPNALPIIVGGIRTALVINVGTAPLSMLIGGESLGGLIFPGIYLNNHGQL 190 P+Q L RVELPNALPIIVGG+RTAL INVGTAPL+ LIG +SLG LIFPGIYL+N L Sbjct: 146 TPWQSLTRVELPNALPIIVGGVRTALAINVGTAPLAYLIGADSLGTLIFPGIYLDNQQML 205 Query: 191 LLGAAATALLALLL 204 LLGAA+TA+LALLL Sbjct: 206 LLGAASTAVLALLL 219 >Q39LS2.1 Q39LS2_BURS3 ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit Length = 238 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 138/198 (69%), Positives = 162/198 (81%) Query: 7 LIQWIGMDVITQYRSDLIYYTGKHLQLVAWSMLLAIATGVPAGVVLSRPALGRRAEYFIQ 66 L + IG D +Q DL YY G+H+ LV +SM LAIA GVPAGV+LSRP +AE F+Q Sbjct: 22 LARGIGADTFSQRADDLAYYAGQHMLLVVYSMALAIAVGVPAGVLLSRPRFQHQAERFMQ 81 Query: 67 VFNIGNTIPSIAVLALALAFFGIGNWPTILALWLASLLPIVRNTFEGLKNVPAPLREAAK 126 VFNIGNTIPS+AVLA+AL FGIGN P I+AL+LASLLPI RNT+EG+KNVPA LREAAK Sbjct: 82 VFNIGNTIPSLAVLAIALGIFGIGNVPAIVALFLASLLPITRNTYEGMKNVPAALREAAK 141 Query: 127 GIGMKPYQVLLRVELPNALPIIVGGIRTALVINVGTAPLSMLIGGESLGGLIFPGIYLNN 186 GIGM +Q L+RVELP+ALPIIVGG+RTAL INVGTAPL+ LIG +SLG LIFPGIYL+N Sbjct: 142 GIGMTGWQSLVRVELPDALPIIVGGVRTALAINVGTAPLAYLIGADSLGSLIFPGIYLDN 201 Query: 187 HGQLLLGAAATALLALLL 204 LLLGA+ TA+LAL+L Sbjct: 202 QPLLLLGASLTAILALVL 219 >B4EPP8.1 B4EPP8_BURCJ Putative binding-protein-dependent transport system component Length = 238 Score = 264 bits (675), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 137/198 (69%), Positives = 161/198 (81%) Query: 7 LIQWIGMDVITQYRSDLIYYTGKHLQLVAWSMLLAIATGVPAGVVLSRPALGRRAEYFIQ 66 L + IG + Q DL YY G+H+ LV +SM LAIA GVPAGV+LSRP R+AE F+Q Sbjct: 22 LARGIGAETFKQRSDDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLLSRPRFQRQAERFMQ 81 Query: 67 VFNIGNTIPSIAVLALALAFFGIGNWPTILALWLASLLPIVRNTFEGLKNVPAPLREAAK 126 VFNIGNTIPS+AVLA+AL FGIGN P I+AL+LASLLP+ RN +EG+KNVPA LREAAK Sbjct: 82 VFNIGNTIPSLAVLAIALGIFGIGNVPAIVALFLASLLPVTRNAYEGMKNVPAALREAAK 141 Query: 127 GIGMKPYQVLLRVELPNALPIIVGGIRTALVINVGTAPLSMLIGGESLGGLIFPGIYLNN 186 GIGM +Q L+RVELPNALPIIVGG+RTAL INVGTAPL+ LIG +SLG LIFPGIYL+N Sbjct: 142 GIGMTGWQSLVRVELPNALPIIVGGVRTALAINVGTAPLAYLIGADSLGSLIFPGIYLDN 201 Query: 187 HGQLLLGAAATALLALLL 204 LLLGA+ TA+LAL+L Sbjct: 202 QPLLLLGASLTAILALVL 219 >A2W4N8.1 A2W4N8_9BURK Amino acid ABC transporter, permease protein Length = 323 Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 136/198 (68%), Positives = 160/198 (80%) Query: 7 LIQWIGMDVITQYRSDLIYYTGKHLQLVAWSMLLAIATGVPAGVVLSRPALGRRAEYFIQ 66 L + IG + Q DL YY G+H+ LV +SM LAIA GVPAGV+LSRP +AE F+Q Sbjct: 107 LARGIGAETFHQRADDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLLSRPRFQHQAERFMQ 166 Query: 67 VFNIGNTIPSIAVLALALAFFGIGNWPTILALWLASLLPIVRNTFEGLKNVPAPLREAAK 126 VFNIGNTIPS+AVLA+AL FGIGN P I+AL+LASLLP+ RN +EG+KNVPA LREAAK Sbjct: 167 VFNIGNTIPSLAVLAIALGIFGIGNVPAIVALFLASLLPVTRNAYEGMKNVPAALREAAK 226 Query: 127 GIGMKPYQVLLRVELPNALPIIVGGIRTALVINVGTAPLSMLIGGESLGGLIFPGIYLNN 186 GIGM +Q L+RVELPNALPIIVGG+RTAL INVGTAPL+ LIG +SLG LIFPGIYL+N Sbjct: 227 GIGMTGWQSLVRVELPNALPIIVGGVRTALAINVGTAPLAYLIGADSLGSLIFPGIYLDN 286 Query: 187 HGQLLLGAAATALLALLL 204 LLLGA+ TA+LAL+L Sbjct: 287 QPLLLLGASLTAILALVL 304