BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0183.p         (123 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYH9.1 D8IYH9_HERSS Two-component system sensor histidine kina...   198   2e-49
F2KFD5.1 F2KFD5_PSEBR Putative response regulator, CheY family        179   2e-43
B9TIR5.1 B9TIR5_RICCO Two-component system sensor histidine kina...   176   1e-42
A0KH30.1 A0KH30_AERHH Chemotaxis protein CheY                         175   2e-42
B3PCN8.1 B3PCN8_CELJU Chemotaxis protein CheY                         171   4e-41

>D8IYH9.1 D8IYH9_HERSS Two-component system sensor histidine kinase/response
           regulator protein
          Length = 122

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/120 (78%), Positives = 104/120 (86%)

Query: 4   KTILIVDDSFSLRQTISIALKAAGYDVVEAIDGRDALNKLDGRKYNLIISDVNMPNLDGL 63
           K ILIVDDSFSLRQTIS ALK+AGY V EA DG+ AL  LDGRK+NL+ISD+NMP+LDGL
Sbjct: 3   KNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGRKFNLVISDLNMPHLDGL 62

Query: 64  SFVREAKQKPNYKFTPVLMLTTESGDTRKQEGKAIGVRAWVHKPFLPPVLLDAVAKLVTP 123
           SFVRE KQ P YKFTPV+MLTTES + RKQEGKA G+RAWVHKPF PPVLLDAVAKL+ P
Sbjct: 63  SFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKLILP 122


>F2KFD5.1 F2KFD5_PSEBR Putative response regulator, CheY family
          Length = 122

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 101/120 (84%)

Query: 4   KTILIVDDSFSLRQTISIALKAAGYDVVEAIDGRDALNKLDGRKYNLIISDVNMPNLDGL 63
           KTILIVDDS S+RQ +SI LK AGY+V+E +DGRDAL KLDGRK +LI+SDVNMPN+DGL
Sbjct: 3   KTILIVDDSASIRQVVSITLKGAGYEVIEGVDGRDALTKLDGRKIHLIVSDVNMPNMDGL 62

Query: 64  SFVREAKQKPNYKFTPVLMLTTESGDTRKQEGKAIGVRAWVHKPFLPPVLLDAVAKLVTP 123
           SF++ AKQ P YKFTPV+MLTTE+G+  KQ+G+A+G +AW+ KPF P  +L AV+KL+ P
Sbjct: 63  SFIKAAKQLPAYKFTPVIMLTTETGEAMKQQGQAVGAKAWMVKPFQPAQMLGAVSKLIMP 122


>B9TIR5.1 B9TIR5_RICCO Two-component system sensor histidine kinase/response
           regulator, putative
          Length = 122

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 81/120 (67%), Positives = 103/120 (85%)

Query: 4   KTILIVDDSFSLRQTISIALKAAGYDVVEAIDGRDALNKLDGRKYNLIISDVNMPNLDGL 63
           KTIL+VDDS SLRQ +SIALK AGY+V+EA DG+DAL+KL+G+K +LIISDVNMPN+DG+
Sbjct: 3   KTILVVDDSASLRQVVSIALKGAGYEVIEANDGKDALSKLNGQKIHLIISDVNMPNMDGI 62

Query: 64  SFVREAKQKPNYKFTPVLMLTTESGDTRKQEGKAIGVRAWVHKPFLPPVLLDAVAKLVTP 123
           SFV+ AKQ P YKFTPV+MLTTE+G+++K EG+A G +AWV KPF P  +L AV+KL+ P
Sbjct: 63  SFVKAAKQLPAYKFTPVIMLTTEAGESKKAEGQAAGAKAWVVKPFQPAQMLTAVSKLILP 122


>A0KH30.1 A0KH30_AERHH Chemotaxis protein CheY
          Length = 122

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 101/120 (84%)

Query: 4   KTILIVDDSFSLRQTISIALKAAGYDVVEAIDGRDALNKLDGRKYNLIISDVNMPNLDGL 63
           KT+LIVDDS ++RQ + + LK AGY+V+EA DG+DAL KLDG+K NLIISDVNMPN+DG+
Sbjct: 3   KTVLIVDDSATIRQVVGMTLKGAGYEVMEACDGKDALKKLDGKKINLIISDVNMPNMDGI 62

Query: 64  SFVREAKQKPNYKFTPVLMLTTESGDTRKQEGKAIGVRAWVHKPFLPPVLLDAVAKLVTP 123
           SFV+EAK+  +YKFTPV+MLTTES D++KQEG+A G +AWV KPF P  +L AVAKL+ P
Sbjct: 63  SFVKEAKKLASYKFTPVIMLTTESQDSKKQEGQAAGAKAWVVKPFQPDQMLAAVAKLIMP 122


>B3PCN8.1 B3PCN8_CELJU Chemotaxis protein CheY
          Length = 121

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 98/118 (83%)

Query: 4   KTILIVDDSFSLRQTISIALKAAGYDVVEAIDGRDALNKLDGRKYNLIISDVNMPNLDGL 63
           K IL+VDDS S+RQ + +AL+ AGY VVEA DGRDAL+KLDG+K NL+ISDVNMPN+DG+
Sbjct: 3   KVILVVDDSASIRQVVGMALRGAGYTVVEASDGRDALSKLDGQKINLVISDVNMPNMDGI 62

Query: 64  SFVREAKQKPNYKFTPVLMLTTESGDTRKQEGKAIGVRAWVHKPFLPPVLLDAVAKLV 121
           +FV+E KQKPNYKFTPV+MLTTE  D +K+EG+A G +AW+ KPF P  +L AV+ L+
Sbjct: 63  TFVKEMKQKPNYKFTPVIMLTTEGADDKKREGQAAGAKAWIVKPFRPEQMLQAVSMLI 120