BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0173.p         (114 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYI2.1 D8IYI2_HERSS Methyl-accepting chemotaxis transducer tra...   125   2e-27
E1VHN9.1 E1VHN9_9GAMM Methyl-accepting chemotaxis protein              89   2e-16
C4XGQ3.1 C4XGQ3_DESMR Methyl-accepting chemotaxis protein              87   6e-16
D8VN25.1 D8VN25_9ZZZZ Methyl-accepting chemotaxis sensory transd...    85   3e-15
D8VN94.1 D8VN94_9ZZZZ Methyl-accepting chemotaxis sensory transd...    85   3e-15

>D8IYI2.1 D8IYI2_HERSS Methyl-accepting chemotaxis transducer transmembrane
           protein
          Length = 595

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/116 (62%), Positives = 86/116 (74%), Gaps = 7/116 (6%)

Query: 1   VQEISAASREQSAGLEQINDAVHQMAQTTQLTASASEELSSTSEEMSAQAMQLQELILFF 60
           VQEI+AAS EQS GLEQIN+AVHQMAQTTQ+TASASEELS+TSEEMSAQA+ LQ+L+ FF
Sbjct: 485 VQEIAAASHEQSTGLEQINNAVHQMAQTTQMTASASEELSATSEEMSAQAIHLQDLMRFF 544

Query: 61  QVGEEKRPQSKKATNAGKMINESPAISTKFVKPARISMLDGGDD--PIDESSFKRF 114
           QVGE +    K A  A K +   P+   K     R+SMLD  +D   +DESSFKRF
Sbjct: 545 QVGEPR----KNAPRASKAVPLPPS-GGKSDSVRRLSMLDAPEDERGVDESSFKRF 595


>E1VHN9.1 E1VHN9_9GAMM Methyl-accepting chemotaxis protein
          Length = 543

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 59/64 (92%)

Query: 1   VQEISAASREQSAGLEQINDAVHQMAQTTQLTASASEELSSTSEEMSAQAMQLQELILFF 60
           VQEISAAS EQ++GL QI+ AV Q++QTTQ+TASASE+LSST+EEMSAQA++LQ+L+ +F
Sbjct: 442 VQEISAASSEQTSGLTQISSAVAQLSQTTQMTASASEQLSSTAEEMSAQALELQQLVSYF 501

Query: 61  QVGE 64
           Q+G+
Sbjct: 502 QLGQ 505


>C4XGQ3.1 C4XGQ3_DESMR Methyl-accepting chemotaxis protein
          Length = 686

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/117 (49%), Positives = 72/117 (61%), Gaps = 10/117 (8%)

Query: 1   VQEISAASREQSAGLEQINDAVHQMAQTTQLTASASEELSSTSEEMSAQAMQLQELILFF 60
           VQEI+A+S EQ++G  QIN A+ Q+ Q  Q  ASASEE++STSEE+SAQA QLQ  I FF
Sbjct: 577 VQEIAASSNEQNSGASQINKAIQQLDQVVQQNASASEEMASTSEELSAQAEQLQGSISFF 636

Query: 61  QV---GEEKRPQSKKATNAGKMINESPAISTKFVKPARISMLDGGDDPIDESSFKRF 114
           QV   G  KR    KA  AG+M   +P+ + K  K   I M D  DD      F+RF
Sbjct: 637 QVAGSGATKRHMPVKALPAGRMARPAPSKAVKS-KGVAIEMHDADDD------FERF 686


>D8VN25.1 D8VN25_9ZZZZ Methyl-accepting chemotaxis sensory transducer
          Length = 629

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 55/64 (85%)

Query: 1   VQEISAASREQSAGLEQINDAVHQMAQTTQLTASASEELSSTSEEMSAQAMQLQELILFF 60
           VQEISAAS EQ+ GLEQIN AV QMAQTTQ+ AS++EEL++T+EEMS QA+QLQE++ FF
Sbjct: 561 VQEISAASSEQATGLEQINVAVGQMAQTTQVNASSAEELNATAEEMSNQAIQLQEMMEFF 620

Query: 61  QVGE 64
            + E
Sbjct: 621 VIDE 624


>D8VN94.1 D8VN94_9ZZZZ Methyl-accepting chemotaxis sensory transducer
          Length = 620

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 55/64 (85%)

Query: 1   VQEISAASREQSAGLEQINDAVHQMAQTTQLTASASEELSSTSEEMSAQAMQLQELILFF 60
           VQEISAAS EQ+ GLEQIN AV QMAQTTQ+ AS++EEL++T+EEMS QA+QLQE++ FF
Sbjct: 552 VQEISAASSEQATGLEQINVAVGQMAQTTQVNASSAEELNATAEEMSNQAIQLQEMMEFF 611

Query: 61  QVGE 64
            + E
Sbjct: 612 VIDE 615