BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0165.p (341 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6T217.1 A6T217_JANMA Poly(A) polymerase EC=2.7.7.19 530 e-148 A4G8C2.1 A4G8C2_HERAR Poly(A) polymerase EC=2.7.7.19 521 e-146 F1W3V2.1 F1W3V2_9BURK Poly(A) polymerase 518 e-145 D8IYI8.1 D8IYI8_HERSS tRNA nucleotidyltransferase/poly(A) polyme... 518 e-145 B2JGD6.1 B2JGD6_BURP8 Poly(A) polymerase EC=2.7.7.19 434 e-119 >A6T217.1 A6T217_JANMA Poly(A) polymerase EC=2.7.7.19 Length = 455 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 265/298 (88%), Positives = 281/298 (94%) Query: 1 VLRDNTFGEQHEDAVRRDFTINAMYYDPAAQTVLDYHGGIADIRAKTLRIIGVPEARYRE 60 VLRDNTFGEQHEDA+RRDFTINAMYYDPA QTVLDYHGG+ADIR KTLRIIGVPEARYRE Sbjct: 132 VLRDNTFGEQHEDALRRDFTINAMYYDPATQTVLDYHGGMADIRNKTLRIIGVPEARYRE 191 Query: 61 DPVRMLRVVRFAAKLKFSIDAATSAPIPVMAPLINNVPAARVFDEMLKLLMSGHALACLQ 120 DPVRMLRVVRFAAKL FSID TSAPI VMAPLINNVPAARVFDEMLKLLMSG ALACLQ Sbjct: 192 DPVRMLRVVRFAAKLNFSIDPDTSAPIRVMAPLINNVPAARVFDEMLKLLMSGSALACLQ 251 Query: 121 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALANTDARIKQGKPVSPGFLFASLLWHQVL 180 QLRKEGLHHGLLPLLDVVLEQPLGEKFV LALA+TD R+KQGKPVSPGFLFASLLWHQVL Sbjct: 252 QLRKEGLHHGLLPLLDVVLEQPLGEKFVRLALASTDERVKQGKPVSPGFLFASLLWHQVL 311 Query: 181 EKWRAYQASGEYPIPALHLAADDVLNAQTEKLALQRKIASDMRDIWAMQPRFERRTGKAP 240 EKW+AYQA+GEYPIPALHLAADDVLN QT+KLALQRKIASDMRDIWAMQPRFERR GK+P Sbjct: 312 EKWKAYQAAGEYPIPALHLAADDVLNTQTDKLALQRKIASDMRDIWAMQPRFERRIGKSP 371 Query: 241 YKLLEHLRLRAGYDFLLLRCASGEIDAELGDWWTDFMEADSSGRESLLARKPTVSSAA 298 YKLLEHLR+RAGYDFLLLRCASGEID+E+G+WWT FMEAD GRE+LLA+KP ++ A Sbjct: 372 YKLLEHLRMRAGYDFLLLRCASGEIDSEIGEWWTAFMEADGPGREALLAKKPGSTAEA 429 >A4G8C2.1 A4G8C2_HERAR Poly(A) polymerase EC=2.7.7.19 Length = 453 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 260/298 (87%), Positives = 276/298 (92%) Query: 1 VLRDNTFGEQHEDAVRRDFTINAMYYDPAAQTVLDYHGGIADIRAKTLRIIGVPEARYRE 60 VLRDNTFGEQHEDA+RRDFTINAMYYDPA QTVLDYHGGIADIR +TLRIIGVPEARYRE Sbjct: 132 VLRDNTFGEQHEDALRRDFTINAMYYDPATQTVLDYHGGIADIRTRTLRIIGVPEARYRE 191 Query: 61 DPVRMLRVVRFAAKLKFSIDAATSAPIPVMAPLINNVPAARVFDEMLKLLMSGHALACLQ 120 DPVR+LRVVRFAAKL F+I TSAPI VMAPLINNVP ARVFDEMLKLLMSGHALACLQ Sbjct: 192 DPVRLLRVVRFAAKLNFAIAPDTSAPIAVMAPLINNVPTARVFDEMLKLLMSGHALACLQ 251 Query: 121 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALANTDARIKQGKPVSPGFLFASLLWHQVL 180 QLRKEGLHHGLLPLLDVVLEQPLGEKFV LALA+TD R+KQGKPVSPGFLFASLLWHQVL Sbjct: 252 QLRKEGLHHGLLPLLDVVLEQPLGEKFVRLALASTDERVKQGKPVSPGFLFASLLWHQVL 311 Query: 181 EKWRAYQASGEYPIPALHLAADDVLNAQTEKLALQRKIASDMRDIWAMQPRFERRTGKAP 240 EKW AYQA+GEYPIPALHLAADDVLN QT+KLALQRKIASDMRDIWAMQPRF+RR GK P Sbjct: 312 EKWNAYQAAGEYPIPALHLAADDVLNTQTDKLALQRKIASDMRDIWAMQPRFDRRVGKTP 371 Query: 241 YKLLEHLRLRAGYDFLLLRCASGEIDAELGDWWTDFMEADSSGRESLLARKPTVSSAA 298 YKLLEHLRLRAGYDFLLLRCASGEID+E+G+WWT F+ AD GRE LLA+KP ++ A Sbjct: 372 YKLLEHLRLRAGYDFLLLRCASGEIDSEIGEWWTAFIAADGPGREELLAKKPATANEA 429 >F1W3V2.1 F1W3V2_9BURK Poly(A) polymerase Length = 455 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 260/300 (86%), Positives = 276/300 (92%) Query: 1 VLRDNTFGEQHEDAVRRDFTINAMYYDPAAQTVLDYHGGIADIRAKTLRIIGVPEARYRE 60 VLRDNTFGEQHEDA+RRDFTINAMYYDP QTVLDYHGG+ADIR KTLRIIGVPE RYRE Sbjct: 132 VLRDNTFGEQHEDAIRRDFTINAMYYDPDTQTVLDYHGGMADIRNKTLRIIGVPEERYRE 191 Query: 61 DPVRMLRVVRFAAKLKFSIDAATSAPIPVMAPLINNVPAARVFDEMLKLLMSGHALACLQ 120 DPVR+LRVVRFAAKL F+IDAAT+API MAPLINNVPAARVFDEMLKLLMSGHA+ACL Sbjct: 192 DPVRLLRVVRFAAKLDFTIDAATAAPIKTMAPLINNVPAARVFDEMLKLLMSGHAMACLH 251 Query: 121 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALANTDARIKQGKPVSPGFLFASLLWHQVL 180 LRKEGLHHGLLPLLDVVLEQPLGEKFV LALA+TDAR+KQGKPVSPGFLFASLLWHQVL Sbjct: 252 HLRKEGLHHGLLPLLDVVLEQPLGEKFVRLALASTDARVKQGKPVSPGFLFASLLWHQVL 311 Query: 181 EKWRAYQASGEYPIPALHLAADDVLNAQTEKLALQRKIASDMRDIWAMQPRFERRTGKAP 240 EKW AYQA+GE IPALHLAADDVL++QTEKL+LQRKIASDMRDIWAMQPRFERRTGKAP Sbjct: 312 EKWTAYQAAGEASIPALHLAADDVLDSQTEKLSLQRKIASDMRDIWAMQPRFERRTGKAP 371 Query: 241 YKLLEHLRLRAGYDFLLLRCASGEIDAELGDWWTDFMEADSSGRESLLARKPTVSSAAGA 300 YKLLE+LRLRAGYDFLLLRCASGEIDAELG+WWTDFME D RE L +KP S +GA Sbjct: 372 YKLLENLRLRAGYDFLLLRCASGEIDAELGEWWTDFMEGDIGAREQLQTQKPRSSDTSGA 431 >D8IYI8.1 D8IYI8_HERSS tRNA nucleotidyltransferase/poly(A) polymerase protein EC=2.7.7.19 Length = 534 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 262/301 (87%), Positives = 278/301 (92%) Query: 1 VLRDNTFGEQHEDAVRRDFTINAMYYDPAAQTVLDYHGGIADIRAKTLRIIGVPEARYRE 60 VLRDNTFGEQHEDA RRDFTINAMYYDPA+Q VLDYHGGIADIR K LRIIG PEARYRE Sbjct: 153 VLRDNTFGEQHEDATRRDFTINAMYYDPASQAVLDYHGGIADIRDKKLRIIGEPEARYRE 212 Query: 61 DPVRMLRVVRFAAKLKFSIDAATSAPIPVMAPLINNVPAARVFDEMLKLLMSGHALACLQ 120 DPVRMLRVVRFAAKLKF+ID A+SAPI VMAPLI+NVPAARVFDEMLKLLMSGHALACLQ Sbjct: 213 DPVRMLRVVRFAAKLKFTIDPASSAPIRVMAPLIDNVPAARVFDEMLKLLMSGHALACLQ 272 Query: 121 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALANTDARIKQGKPVSPGFLFASLLWHQVL 180 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALA+TDAR+KQGK VSPGFLFASLLWHQVL Sbjct: 273 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALADTDARVKQGKGVSPGFLFASLLWHQVL 332 Query: 181 EKWRAYQASGEYPIPALHLAADDVLNAQTEKLALQRKIASDMRDIWAMQPRFERRTGKAP 240 EKWRAYQA+GEYPIPALHLAADDVL+AQTEKLALQRKIASDMRDIWAMQPRFERR GKAP Sbjct: 333 EKWRAYQAAGEYPIPALHLAADDVLDAQTEKLALQRKIASDMRDIWAMQPRFERRVGKAP 392 Query: 241 YKLLEHLRLRAGYDFLLLRCASGEIDAELGDWWTDFMEADSSGRESLLARKPTVSSAAGA 300 YKLLEHLRLRAG+DFLLLRC SGE+DAELG+WW F+ + RE L+ARKP ++ A Sbjct: 393 YKLLEHLRLRAGFDFLLLRCQSGELDAELGEWWEAFIAGTGAEREELIARKPADAAGVAA 452 Query: 301 G 301 G Sbjct: 453 G 453 >B2JGD6.1 B2JGD6_BURP8 Poly(A) polymerase EC=2.7.7.19 Length = 538 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/290 (72%), Positives = 251/290 (86%) Query: 1 VLRDNTFGEQHEDAVRRDFTINAMYYDPAAQTVLDYHGGIADIRAKTLRIIGVPEARYRE 60 VLRDN +GEQHEDA RRDFT+NAMYYDPA QTVLDYH G+AD+RA+ LR+IG P RYRE Sbjct: 201 VLRDNVWGEQHEDATRRDFTVNAMYYDPATQTVLDYHNGMADVRARLLRMIGDPATRYRE 260 Query: 61 DPVRMLRVVRFAAKLKFSIDAATSAPIPVMAPLINNVPAARVFDEMLKLLMSGHALACLQ 120 DPVRMLRVVRFAAKL F ID AT API +A LINNVPAAR+FDEMLKLL+SGHALACLQ Sbjct: 261 DPVRMLRVVRFAAKLGFEIDEATRAPITELADLINNVPAARLFDEMLKLLLSGHALACLQ 320 Query: 121 QLRKEGLHHGLLPLLDVVLEQPLGEKFVTLALANTDARIKQGKPVSPGFLFASLLWHQVL 180 +LRKEGLHHGLLPLLDVVLEQP GEKF+TLAL NTDAR++ GKPVSPGFLFA+LLWH + Sbjct: 321 RLRKEGLHHGLLPLLDVVLEQPHGEKFITLALNNTDARVRAGKPVSPGFLFATLLWHDMQ 380 Query: 181 EKWRAYQASGEYPIPALHLAADDVLNAQTEKLALQRKIASDMRDIWAMQPRFERRTGKAP 240 ++W+ Y+A+GEYP+PALH A DDVL+ QTEKLA+ ++ +SDMR+IW +Q R E+R+G++ Sbjct: 381 QRWQQYEANGEYPVPALHRAMDDVLDMQTEKLAIHKRFSSDMREIWGLQHRLEKRSGRSA 440 Query: 241 YKLLEHLRLRAGYDFLLLRCASGEIDAELGDWWTDFMEADSSGRESLLAR 290 KLLEH R RAGYDFLLLRC SGE+D +G WWT+F+E D++ RE+LL++ Sbjct: 441 LKLLEHQRFRAGYDFLLLRCESGELDEAVGSWWTEFIEGDAAAREALLSQ 490