BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0161.p (331 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYJ1.1 D8IYJ1_HERSS Permease transmembrane transport protein 458 e-127 C3X536.1 C3X536_OXAFO Permease 399 e-109 C3XBA9.1 C3XBA9_OXAFO Predicted protein 384 e-104 D8NYW9.1 D8NYW9_RALSO Putative permease transmembrane transport ... 369 e-100 D8N7H0.1 D8N7H0_RALSO Putative permease transmembrane transport ... 366 3e-99 >D8IYJ1.1 D8IYJ1_HERSS Permease transmembrane transport protein Length = 360 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 244/328 (74%), Positives = 289/328 (88%) Query: 1 MLTPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVL 60 ML+PFV A I+ YALNPGVDW+A RR+GP +PR +AV I+VLLL+LAGLALVL+VVP++ Sbjct: 32 MLSPFVAAGIIGYALNPGVDWIASRRLGPVRVPRFVAVTIMVLLLILAGLALVLIVVPLV 91 Query: 61 VKEIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVL 120 +++IPLLQ Q+P LDKLNA V+PRL + GI VRLD+ GIK +LTQQ++TS DE+W SVL Sbjct: 92 LRQIPLLQAQVPPLLDKLNAFVSPRLHQLGIDVRLDLAGIKSLLTQQISTSSDEVWTSVL 151 Query: 121 ASAKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDL 180 ASAK+GGTALLTW ANLLF+PMVLFYLLQDWH FIKR++ +IPRRW G+I+ M EVD L Sbjct: 152 ASAKVGGTALLTWLANLLFVPMVLFYLLQDWHQFIKRMQILIPRRWAGRINTMAAEVDGL 211 Query: 181 LAQYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAA 240 L QYLRGQLLVML+LA YYSVAL AGFD ALPVG+LTGLLVFIPYVGFGLGLVLA++AA Sbjct: 212 LGQYLRGQLLVMLVLAVYYSVALTAAGFDSALPVGVLTGLLVFIPYVGFGLGLVLAILAA 271 Query: 241 VLQFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGV 300 +LQF G GL+ VA+IYG+GQVLESFILTP+LVGERIGLHPL+VIFALLAFGQLFGFVGV Sbjct: 272 ILQFDGAIGLLWVALIYGVGQVLESFILTPKLVGERIGLHPLVVIFALLAFGQLFGFVGV 331 Query: 301 LLALPASAIMSVVVRHLRQHYLSSSFYN 328 LLALPASAI+SV+ H+R+ YL+S+FYN Sbjct: 332 LLALPASAIVSVIALHVRREYLASNFYN 359 >C3X536.1 C3X536_OXAFO Permease Length = 359 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/327 (58%), Positives = 256/327 (78%) Query: 3 TPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLVK 62 TPF+ AILAYALNP VDWL +RIG LPR++AV+IV+LLL+ A L+++P+L++ Sbjct: 33 TPFIAGAILAYALNPIVDWLRSKRIGTLRLPRLIAVIIVMLLLIAIVTAFALIMIPMLIR 92 Query: 63 EIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLAS 122 E P+L +QIP F+ K+N ++P L+E GI + D GIK+ILT+Q GD +W S++AS Sbjct: 93 EWPMLYEQIPAFIAKVNNYLSPILNELGIQIPADNAGIKKILTEQFVPKGDGVWKSLIAS 152 Query: 123 AKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLLA 182 AK GGTA+LTWA NL+ IP+VLFYLL+DWH +++LR MIPRRWV + + + EV+ +LA Sbjct: 153 AKFGGTAVLTWAWNLILIPVVLFYLLKDWHIMMRKLRDMIPRRWVTRAVSFSREVNSMLA 212 Query: 183 QYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAVL 242 QYLRGQLLVM+IL++YYS+ LA+AG+++ALPVGI+TG+L FIPY+G GL LA+ A +L Sbjct: 213 QYLRGQLLVMVILSSYYSITLALAGYNVALPVGIMTGMLAFIPYIGICFGLALAITATLL 272 Query: 243 QFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVLL 302 QFTG+ + + IIYG G + ++TP+LVG+RI LHPL+VIFALLAFGQLFGFVG+LL Sbjct: 273 QFTGMEAWITLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLIVIFALLAFGQLFGFVGILL 332 Query: 303 ALPASAIMSVVVRHLRQHYLSSSFYNS 329 ALP+SAI+SV +HLR +Y S+FY S Sbjct: 333 ALPSSAILSVAYKHLRNYYFDSNFYKS 359 >C3XBA9.1 C3XBA9_OXAFO Predicted protein Length = 359 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 188/327 (57%), Positives = 249/327 (76%) Query: 3 TPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLVK 62 TPF+ AILAYALNP VDWL RIG F +PR+ +V+IVVL L+ L+++P+L+K Sbjct: 33 TPFIAGAILAYALNPVVDWLRSLRIGSFRIPRLASVVIVVLFLISLVTTFALIMIPMLLK 92 Query: 63 EIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLAS 122 E P+L +QIP F+ K++ + P L+E GI + +D G+K+ILT+Q GD +W S++AS Sbjct: 93 EWPILYEQIPAFVAKVSNHLNPVLNEIGIQMPVDNAGVKKILTEQFFPKGDGVWKSLIAS 152 Query: 123 AKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLLA 182 AK GGTA+LTWA NL+ IP+VLFYLL DWH ++LR MIPRRWVGK EV+ +LA Sbjct: 153 AKFGGTAVLTWAWNLILIPVVLFYLLLDWHILTRKLRDMIPRRWVGKTIRFCHEVNTMLA 212 Query: 183 QYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAVL 242 QYLRGQLLVMLIL+ YYS+ALA+AG+++ALPVGI+TGL+ F+PY+G +GL LA+ A ++ Sbjct: 213 QYLRGQLLVMLILSIYYSLALALAGYNVALPVGIMTGLMAFVPYIGICIGLFLAITATLV 272 Query: 243 QFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVLL 302 QF+G+ V + IIYG G + ++TP+LVG+RI LHPL VIFALLAF QLFGFVG+LL Sbjct: 273 QFSGMEAWVTLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLFVIFALLAFAQLFGFVGILL 332 Query: 303 ALPASAIMSVVVRHLRQHYLSSSFYNS 329 ALP+SAI+SV +HLR YL S+FY + Sbjct: 333 ALPSSAILSVAYKHLRALYLDSNFYKN 359 >D8NYW9.1 D8NYW9_RALSO Putative permease transmembrane transport protein (PerM) Length = 356 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/327 (55%), Positives = 247/327 (75%), Gaps = 5/327 (1%) Query: 3 TPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLVK 62 TPFV A IL+Y L+PGV WL R R+ PRVL V +++LLL + +AL+L+++ VL + Sbjct: 35 TPFVFAFILSYILHPGVAWLQRHRV-----PRVLGVFLMILLLTVVAVALMLLILAVLQR 89 Query: 63 EIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLAS 122 EIP +++Q+P L KLNA V PRL+E G+HVR D G++++LT+QLA S +++ ++ L Sbjct: 90 EIPAIREQLPGMLSKLNAAVTPRLAEMGVHVRFDFPGLRKMLTEQLAASPEDVMSTALNY 149 Query: 123 AKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLLA 182 ++ G+A + + +P+V+FYLL DW+ ++RL G +PRRW+ K + E D LL+ Sbjct: 150 LRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLMRRLEGAVPRRWIDKTRELAAETDGLLS 209 Query: 183 QYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAVL 242 QYLRGQ++VML+LA YYS LA+AGFD+ALP+GI TGL VFIPY+GFG+GL LA+++A+L Sbjct: 210 QYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGIFTGLAVFIPYIGFGIGLTLAILSALL 269 Query: 243 QFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVLL 302 QF LYGL+AVA++YG+GQVLE F LTP+LVGERIGLHPL VI ALLAFGQLFGF G+LL Sbjct: 270 QFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGERIGLHPLAVILALLAFGQLFGFFGILL 329 Query: 303 ALPASAIMSVVVRHLRQHYLSSSFYNS 329 ALP SA++ V +R +RQ YL S Y Sbjct: 330 ALPISAVLLVGLRQIRQLYLGSKLYRD 356 >D8N7H0.1 D8N7H0_RALSO Putative permease transmembrane transport protein (PerM) Length = 356 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 182/327 (55%), Positives = 251/327 (76%), Gaps = 5/327 (1%) Query: 3 TPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLVK 62 TPFV A IL+Y L+PGV+WL R R+ PRVL V +++LLL++ +AL+L+++ VL + Sbjct: 35 TPFVFAGILSYILHPGVEWLQRHRV-----PRVLGVFLMILLLMVVAMALMLLILAVLQR 89 Query: 63 EIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLAS 122 EIP +++Q+P L KLNA + PRL+E G+HVR D G++++LT+QLA S +++ ++ L Sbjct: 90 EIPAIREQLPGMLSKLNAAITPRLAEMGLHVRFDFPGLRKLLTEQLAASPEDVMSTALNY 149 Query: 123 AKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLLA 182 ++ G+A + + +P+V+FYLL DW+ I+RL G +PRRW+GK + E D LL+ Sbjct: 150 LRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLIRRLEGTVPRRWIGKTRELAAETDGLLS 209 Query: 183 QYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAVL 242 QYLRGQ++VML+LA YYS LA+AGFD+ALP+GI TGL VFIPY+GFG+GL+LA+++A+L Sbjct: 210 QYLRGQIIVMLVLAAYYSTGLALAGFDVALPIGIFTGLAVFIPYIGFGIGLILAILSALL 269 Query: 243 QFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVLL 302 QF LYGL+AVA++YG+GQVLE F LTP+LVGERIGLHPL VI ALLAFGQLFGF G+LL Sbjct: 270 QFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGERIGLHPLAVILALLAFGQLFGFFGILL 329 Query: 303 ALPASAIMSVVVRHLRQHYLSSSFYNS 329 ALP SA++ V +R +RQ YL S Y Sbjct: 330 ALPISAVLLVGLRQIRQLYLGSKLYRD 356