BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0146.p (515 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value F1VW24.1 F1VW24_9BURK Putative two-component sensor kinase trans... 722 0.0 A6T207.1 A6T207_JANMA Sensor histidine kinase transcription regu... 674 0.0 A4G8B6.1 A4G8B6_HERAR Putative two-component sensor kinase 666 0.0 D8IYK4.1 D8IYK4_HERSS Two component transmembrane sensor histidi... 630 e-178 Q1LR76.1 Q1LR76_RALME Putative sensory histidine kinase in two-c... 568 e-160 >F1VW24.1 F1VW24_9BURK Putative two-component sensor kinase transcriptional regulatory protein Length = 509 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/491 (71%), Positives = 415/491 (84%), Gaps = 3/491 (0%) Query: 28 EERIQRSLFGEILDWMLAPLLLLWPMSIAITYLIAQSIANQPFDRALEDSVTVLAQQVSE 87 +E I+RSLFGEILDWML PLLLLWPMSIAITYL+A+SIANQPFDRAL+DSVTVL+QQV E Sbjct: 19 DEPIRRSLFGEILDWMLVPLLLLWPMSIAITYLVAKSIANQPFDRALDDSVTVLSQQVRE 78 Query: 88 VNGKTVARLPVSARDLLRADDIDNIYFQITGPRGEFVEGDRDMPQPPLDEDKTIGSVQFR 147 V+GK VA LP +ARD+LRAD++D +Y+Q+ G +V+GD DM P +E+ +VQFR Sbjct: 79 VDGKVVALLPGAARDILRADEVDTVYYQVRDVDGIYVDGDHDMSMPAEEENAPTSTVQFR 138 Query: 148 NDILHGNDVRIAYTQVDLRRTS---EQRAASSKEPRLATVQVGETLEKRAQLANEIIKGV 204 ++ +HG +VRIAY QVDLR + EQ + + EPR+A VQVGETL+KRA+LAN+IIKGV Sbjct: 139 DERIHGTEVRIAYVQVDLRSSRLMREQASDTVSEPRMALVQVGETLDKRARLANDIIKGV 198 Query: 205 ILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEISPLVRSL 264 ILPQF+ILPVALALVWFAL+RGL+PL+ELQQRIRARRPDDLSPIDSGQVPEEISPLVRSL Sbjct: 199 ILPQFIILPVALALVWFALARGLAPLAELQQRIRARRPDDLSPIDSGQVPEEISPLVRSL 258 Query: 265 NDMLARLSQTIALQKRFIADAAHQMKTPLAGMRMQSELALRQTDQADIHRSLEQLAKSSE 324 NDML RLSQTI LQKRFIADAAHQMKTPLAGMRMQSELALRQT Q +IHRSLEQL+KSSE Sbjct: 259 NDMLERLSQTIDLQKRFIADAAHQMKTPLAGMRMQSELALRQTSQDEIHRSLEQLSKSSE 318 Query: 325 SATRLVNQLLSLARAENQTPATAPFEPIELSELARNVVQDWVPMSFTQRIDLGFEQPGHP 384 +ATRL+NQLLSLA AEN++ FEPIEL ELAR VVQDWVP + ++ID+GFEQPGHP Sbjct: 319 AATRLINQLLSLAHAENRSVRARAFEPIELCELARTVVQDWVPAALARQIDIGFEQPGHP 378 Query: 385 IMISGNPIMLRELLSNLLDNALHYTPALGSVTVRARADEETGQAFLEVEDTGPGIAPTER 444 +M GN ++LRELLSNL+DNAL YTP+LGSVT+R R DE QA LE+EDTGPGIA ER Sbjct: 379 VMTVGNAMLLRELLSNLIDNALRYTPSLGSVTIRVRTDENRQQAMLEIEDTGPGIAAAER 438 Query: 445 GHVFERFYRILGTHTAGSGLGLAIVREIAQQHEATVDISNNPRSTDPKAPGCLFRVTLRM 504 H+FERFYRILG++ GSGLGLAIVREIA QH+A +D+ +NP S DPK PG LFRVTL M Sbjct: 439 SHIFERFYRILGSNVEGSGLGLAIVREIALQHDAEIDVFSNPHSHDPKIPGSLFRVTLPM 498 Query: 505 TPRQTYMDDIG 515 ++++DIG Sbjct: 499 AHALSFIEDIG 509 >A6T207.1 A6T207_JANMA Sensor histidine kinase transcription regulator protein Length = 544 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/502 (69%), Positives = 403/502 (80%), Gaps = 5/502 (0%) Query: 1 MPDARPIDPQATPPTKGKRRAVIATQPEERIQRSLFGEILDWMLAPLLLLWPMSIAITYL 60 M DA +D A T ATQPEER QRSLFGEILDWML PLLLLWP+SIAITYL Sbjct: 35 MHDAHRLDAHAEAGTSKSN----ATQPEERTQRSLFGEILDWMLVPLLLLWPLSIAITYL 90 Query: 61 IAQSIANQPFDRALEDSVTVLAQQVSEVNGKTVARLPVSARDLLRADDIDNIYFQITGPR 120 +A+SIAN+PFDRALED VTV+AQQV EVNGK V RL +A D+L ADDIDN+Y+Q+ Sbjct: 91 VAKSIANEPFDRALEDKVTVVAQQVKEVNGKVVTRLTGAATDILHADDIDNVYYQVRNSF 150 Query: 121 GEFVEGDRDMPQPPLDEDKTIGSVQFRNDILHGNDVRIAYTQVDLRRTSEQRAASSKEPR 180 G+ VEGD ++P P E S QFR D + +VRIAY VDL +T + S EPR Sbjct: 151 GDVVEGDMEIPLPKDVEAPPPWSTQFRYDFIRNTEVRIAYIYVDLHKT-QTAPQLSIEPR 209 Query: 181 LATVQVGETLEKRAQLANEIIKGVILPQFVILPVALALVWFALSRGLSPLSELQQRIRAR 240 LA VQV ETL+KR+QL N+IIKGVI+P+F+ILP+AL LVWFAL+RGL PL ELQQRIR R Sbjct: 210 LALVQVAETLDKRSQLVNQIIKGVIVPEFIILPIALVLVWFALTRGLRPLVELQQRIRER 269 Query: 241 RPDDLSPIDSGQVPEEISPLVRSLNDMLARLSQTIALQKRFIADAAHQMKTPLAGMRMQS 300 RPDDLSPIDSG VPEEI PLV SLN+ML RLSQ+I +QKRFIADAAHQMKTPLAGMRMQS Sbjct: 270 RPDDLSPIDSGYVPEEILPLVGSLNEMLERLSQSIKVQKRFIADAAHQMKTPLAGMRMQS 329 Query: 301 ELALRQTDQADIHRSLEQLAKSSESATRLVNQLLSLARAENQTPATAPFEPIELSELARN 360 ELALRQTDQ +IH+SLEQLAKSS+SATR++NQLL+LARAENQTP T P +P+ELSELAR+ Sbjct: 330 ELALRQTDQVEIHKSLEQLAKSSKSATRMINQLLALARAENQTPTTRPLQPLELSELARD 389 Query: 361 VVQDWVPMSFTQRIDLGFEQPGHPIMISGNPIMLRELLSNLLDNALHYTPALGSVTVRAR 420 VQ+WV SF ++IDLGFEQP + IM++G+ IMLRELL+NL+DNAL+YTPA G TVR R Sbjct: 390 TVQEWVQTSFNKKIDLGFEQPDYHIMVNGDAIMLRELLNNLIDNALNYTPAGGHATVRVR 449 Query: 421 ADEETGQAFLEVEDTGPGIAPTERGHVFERFYRILGTHTAGSGLGLAIVREIAQQHEATV 480 ADEE A+LEVEDTGPGIAP E +FERFYRILG++ GSGLGLAIVREIAQQH A + Sbjct: 450 ADEEARLAYLEVEDTGPGIAPHEHKRIFERFYRILGSNVEGSGLGLAIVREIAQQHGAEI 509 Query: 481 DISNNPRSTDPKAPGCLFRVTL 502 DI NNP T+PKAPGCL R+TL Sbjct: 510 DILNNPNCTNPKAPGCLMRITL 531 >A4G8B6.1 A4G8B6_HERAR Putative two-component sensor kinase Length = 512 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/516 (67%), Positives = 401/516 (77%), Gaps = 9/516 (1%) Query: 1 MPDARPI---DPQATPPTKGKRRAVIATQPEERIQRSLFGEILDWMLAPLLLLWPMSIAI 57 MPD + D AT G Q EER QRSLFGEILDWML PLLLLWP+SIAI Sbjct: 1 MPDTHRLNAPDTDATASNTGT-----TAQHEERTQRSLFGEILDWMLVPLLLLWPLSIAI 55 Query: 58 TYLIAQSIANQPFDRALEDSVTVLAQQVSEVNGKTVARLPVSARDLLRADDIDNIYFQIT 117 TYL+A+SIAN+PFDRALED VTV+AQQV EVNG+ V RL A D+L ADDIDNIY+QI Sbjct: 56 TYLVAKSIANEPFDRALEDKVTVVAQQVKEVNGQVVTRLTGPAIDILHADDIDNIYYQIR 115 Query: 118 GPRGEFVEGDRDMPQPPLDEDKTIGSVQFRNDILHGNDVRIAYTQVDLRRTSEQRAASSK 177 FVEGD +MP P E+ S +FR D +H +VRIAY VDL +T + S Sbjct: 116 DAHDTFVEGDPEMPLPKDAEESAPWSTKFRYDFIHNTEVRIAYIYVDLHKT-QVEPQLSI 174 Query: 178 EPRLATVQVGETLEKRAQLANEIIKGVILPQFVILPVALALVWFALSRGLSPLSELQQRI 237 EPR+A VQVGETL+KR+QL N+IIKGVI+P+F+ILP+AL LVWFAL+RGL PL+ELQQRI Sbjct: 175 EPRMALVQVGETLDKRSQLVNQIIKGVIVPEFIILPIALILVWFALTRGLRPLAELQQRI 234 Query: 238 RARRPDDLSPIDSGQVPEEISPLVRSLNDMLARLSQTIALQKRFIADAAHQMKTPLAGMR 297 RARRPDDLSPIDSG VPEEI PLV SLNDML RLSQ+I +QKRFIADAAHQMKTPLAGMR Sbjct: 235 RARRPDDLSPIDSGHVPEEIIPLVGSLNDMLERLSQSIKVQKRFIADAAHQMKTPLAGMR 294 Query: 298 MQSELALRQTDQADIHRSLEQLAKSSESATRLVNQLLSLARAENQTPATAPFEPIELSEL 357 MQSELALRQTD A+IH+SLEQLAKSS+SATR+VNQLL+LARAENQTP T P + +ELSEL Sbjct: 295 MQSELALRQTDHAEIHKSLEQLAKSSKSATRMVNQLLALARAENQTPQTKPMQVLELSEL 354 Query: 358 ARNVVQDWVPMSFTQRIDLGFEQPGHPIMISGNPIMLRELLSNLLDNALHYTPALGSVTV 417 AR+ VQ+WV SF ++IDLGFEQP +M G+ ML ELL+NL+DNAL YTPA G+ TV Sbjct: 355 ARDTVQNWVQTSFNRKIDLGFEQPDEAVMARGDATMLHELLNNLIDNALSYTPAGGNATV 414 Query: 418 RARADEETGQAFLEVEDTGPGIAPTERGHVFERFYRILGTHTAGSGLGLAIVREIAQQHE 477 R R D++ G AFLEVED GPGIAP ER H+FERFYRILG++ GSGLGLAIVREIA QH Sbjct: 415 RVRTDQQAGLAFLEVEDNGPGIAPHERSHIFERFYRILGSNVEGSGLGLAIVREIALQHN 474 Query: 478 ATVDISNNPRSTDPKAPGCLFRVTLRMTPRQTYMDD 513 A ++I NNPR K PGCL RV LR+ P +T DD Sbjct: 475 AEIEILNNPRCQGQKRPGCLMRVILRLEPAETPWDD 510 >D8IYK4.1 D8IYK4_HERSS Two component transmembrane sensor histidine kinase protein EC=2.7.3.- Length = 390 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 320/390 (82%), Positives = 347/390 (88%), Gaps = 6/390 (1%) Query: 130 MPQPPLDEDK-TIGSVQFRNDILHGNDVRIAYTQVDLRRTSEQRAASSKEPRLATVQVGE 188 MPQPP DED+ T+G+VQFRNDILHG+DVRIA QVDLRR++ QRAAS +EPRLATVQVGE Sbjct: 1 MPQPPPDEDRSTVGTVQFRNDILHGSDVRIATLQVDLRRSAAQRAAS-REPRLATVQVGE 59 Query: 189 TLEKRAQLANEIIKGVILPQFVILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPI 248 TLEKRAQLANEIIKGVILPQF+ILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPI Sbjct: 60 TLEKRAQLANEIIKGVILPQFIILPVALALVWFALSRGLSPLSELQQRIRARRPDDLSPI 119 Query: 249 DSGQVPEEISPLVRSLNDMLARLSQTIALQKRFIADAAHQMKTPLAGMRMQSELALRQTD 308 DSGQVPEEISPLVRSLNDMLARLSQTIA+QKRFIADAAHQMKTPLAGMRMQSELALRQ D Sbjct: 120 DSGQVPEEISPLVRSLNDMLARLSQTIAIQKRFIADAAHQMKTPLAGMRMQSELALRQDD 179 Query: 309 QADIHRSLEQLAKSSESATRLVNQLLSLARAENQTPATAPFEPIELSELARNVVQDWVPM 368 Q D+ RSLEQLAKSSE+ATRLVNQLLSLARAENQ + P+EL+ELAR+VVQDWVPM Sbjct: 180 QVDVRRSLEQLAKSSETATRLVNQLLSLARAENQQSQSGGMIPVELNELARSVVQDWVPM 239 Query: 369 SFTQRIDLGFEQPGHPIMISGNPIMLRELLSNLLDNALHYTP--ALGSVTVRARADEETG 426 SFTQRIDLGFEQP HPI+I+GNP+MLRELLSNLLDNALHYTP G VTVRAR DE G Sbjct: 240 SFTQRIDLGFEQPDHPILITGNPVMLRELLSNLLDNALHYTPHDGNGRVTVRARTDEGGG 299 Query: 427 QAFLEVEDTGPGIAPTERGHVFERFYRILGTHTAGS--GLGLAIVREIAQQHEATVDISN 484 A LEVED GPGI ER +VFERFYRILGT + GS GLGLAIVREIAQQHEA ++I++ Sbjct: 300 LAILEVEDNGPGIPVAERANVFERFYRILGTPSTGSGLGLGLAIVREIAQQHEAALEITS 359 Query: 485 NPRSTDPKAPGCLFRVTLRMTPRQTYMDDI 514 NPRSTDPK PGC+FRV+ RM PR + DDI Sbjct: 360 NPRSTDPKYPGCVFRVSFRMMPRTPFFDDI 389 >Q1LR76.1 Q1LR76_RALME Putative sensory histidine kinase in two-component regulatory system with Rmet_0465 Length = 524 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 285/474 (60%), Positives = 354/474 (74%), Gaps = 9/474 (1%) Query: 33 RSLFGEILDWMLAPLLLLWPMSIAITYLIAQSIANQPFDRALEDSVTVLAQQVSEVNGKT 92 RSLFGEILDWMLAPLLLLWPMSIA+TYL+A+SIAN PFDRALE S VL+QQV EVNG+ Sbjct: 54 RSLFGEILDWMLAPLLLLWPMSIAVTYLVAKSIANGPFDRALEASAIVLSQQVREVNGRV 113 Query: 93 VARLPVSARDLLRADDIDNIYFQITGPRGEFVEGDRDMPQPPLDEDKTIGSVQFRNDILH 152 +LP+SAR++LRAD+ DNIY+Q+ G GE+V GD D+P P DE+ G V R+D + Sbjct: 114 TLQLPLSAREILRADETDNIYYQVVGKHGEYVAGDHDLPLPSEDEEGHAGLVSLRDDRVA 173 Query: 153 GNDVRIAYTQVDLRRTSEQRAASSKEPRLATVQVGETLEKRAQLANEIIKGVILPQFVIL 212 GNDVR+AYT V+L+ S +P L VQV ETL+KRA+LANEIIKGVILPQFVIL Sbjct: 174 GNDVRVAYTYVELKNIS------GAQPVL--VQVAETLDKRARLANEIIKGVILPQFVIL 225 Query: 213 PVALALVWFALSRGLSPLSELQQRIRARRPDDLSPIDSGQVPEEISPLVRSLNDMLARLS 272 P+A+ LVWF L+RGL+PL+ +QQRIRAR P D SPID P+EI+PLV S ND+L++L Sbjct: 226 PLAVVLVWFGLTRGLAPLTAIQQRIRARNPGDTSPIDERAAPQEITPLVASFNDLLSQLE 285 Query: 273 QTIALQKRFIADAAHQMKTPLAGMRMQSELALRQTDQADIHRSLEQLAKSSESATRLVNQ 332 Q++ QKRFIADAAHQMKTPLAG+RMQ+ELA R+ ++HRSL Q+A SS+ LV Q Sbjct: 286 QSVQTQKRFIADAAHQMKTPLAGLRMQAELAQREQSPEELHRSLAQIAGSSKRTAHLVTQ 345 Query: 333 LLSLARAENQTPATAPFEPIELSELARNVVQDWVPMSFTQRIDLGFEQPGHPIMISGNPI 392 LLSLAR EN P+ L+ LAR+VV+D +P ++ ++IDLG E HP+M++GN + Sbjct: 346 LLSLARMENLA-GVGGMTPVNLTALARDVVKDLLPQAWARQIDLGLEGDEHPVMVTGNRV 404 Query: 393 MLRELLSNLLDNALHYTPALGSVTVRARADEETGQAFLEVEDTGPGIAPTERGHVFERFY 452 ML E+L+NL+DNA+ YTP G TVR AD A+L+VEDTGPGI P+ERG V ERFY Sbjct: 405 MLTEMLNNLVDNAIRYTPPGGHATVRVIADAFEPFAYLDVEDTGPGIPPSERGRVMERFY 464 Query: 453 RILGTHTAGSGLGLAIVREIAQQHEATVDISNNPRSTDPKAPGCLFRVTLRMTP 506 R+LGT+T GSGLGLAIVREI QQH + I +N T+P+ G F VTLR P Sbjct: 465 RVLGTNTEGSGLGLAIVREIVQQHGGEISIDDNVYQTEPRLAGARFHVTLRRAP 518