BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0145.p         (91 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYK5.1 D8IYK5_HERSS Two component response regulator protein        154   4e-36
A6T206.1 A6T206_JANMA Two-components system response regulator        150   5e-35
Q1LR75.1 Q1LR75_RALME DNA-binding response regulator in two-comp...   150   8e-35
F1VW25.1 F1VW25_9BURK Response regulators consisting of a CheY-l...   150   9e-35
B2AHB7.1 B2AHB7_CUPTR Putative response regulator, CheY family        149   1e-34

>D8IYK5.1 D8IYK5_HERSS Two component response regulator protein
          Length = 237

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/77 (97%), Positives = 77/77 (100%)

Query: 1   MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 60
           ML+LSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGG+
Sbjct: 147 MLELSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGV 206

Query: 61  RIATVRGLGYCLEKLPE 77
           RIATVRGLGYCLEKLPE
Sbjct: 207 RIATVRGLGYCLEKLPE 223


>A6T206.1 A6T206_JANMA Two-components system response regulator
          Length = 233

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 78/87 (89%), Gaps = 4/87 (4%)

Query: 1   MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 60
           MLDLSARELGLLEVLLQR+GRLVSKEQLVDHLCEW EEVSNNAIEVYVHRLRKKIE+GG+
Sbjct: 147 MLDLSARELGLLEVLLQRSGRLVSKEQLVDHLCEWSEEVSNNAIEVYVHRLRKKIEIGGL 206

Query: 61  RIATVRGLGYCLEKL----PESIASAG 83
           RIATVRGLGYCLEK     P +IA  G
Sbjct: 207 RIATVRGLGYCLEKFTETAPNTIAPPG 233


>Q1LR75.1 Q1LR75_RALME DNA-binding response regulator in two-component
           regulatory system with Rmet_0464
          Length = 229

 Score =  150 bits (378), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 72/83 (86%), Positives = 78/83 (93%)

Query: 1   MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 60
           MLDLSARE+GLLE+LL R+GRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI
Sbjct: 147 MLDLSAREVGLLEILLTRSGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 206

Query: 61  RIATVRGLGYCLEKLPESIASAG 83
           RIATVRGLGYCLEK   ++A+ G
Sbjct: 207 RIATVRGLGYCLEKYQPAVAAHG 229


>F1VW25.1 F1VW25_9BURK Response regulators consisting of a CheY-like receiver
           domain and a winged-helix DNA-binding domain
          Length = 228

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 78/82 (95%)

Query: 1   MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 60
           MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIE+GG+
Sbjct: 147 MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIELGGV 206

Query: 61  RIATVRGLGYCLEKLPESIASA 82
           RIATVRGLGYCLEK  ++ A+ 
Sbjct: 207 RIATVRGLGYCLEKYIDAPAAT 228


>B2AHB7.1 B2AHB7_CUPTR Putative response regulator, CheY family
          Length = 229

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 77/81 (95%)

Query: 1   MLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 60
           MLDLSARE+GLLE+LL R+GRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI
Sbjct: 147 MLDLSAREIGLLEILLTRSGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGI 206

Query: 61  RIATVRGLGYCLEKLPESIAS 81
           RIATVRGLGYCLEK   ++A+
Sbjct: 207 RIATVRGLGYCLEKFQPAVAA 227