BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0144.p         (131 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYK5.1 D8IYK5_HERSS Two component response regulator protein        224   3e-57
A4G8B5.1 A4G8B5_HERAR Transcriptional regulatory protein TctD         212   2e-53
A6T206.1 A6T206_JANMA Two-components system response regulator        209   8e-53
F1VW25.1 F1VW25_9BURK Response regulators consisting of a CheY-l...   208   2e-52
A3N689.1 A3N689_BURP6 DNA-binding response regulator                  198   2e-49

>D8IYK5.1 D8IYK5_HERSS Two component response regulator protein
          Length = 237

 Score =  224 bits (571), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/117 (98%), Positives = 115/117 (98%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRA  R
Sbjct: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTR 117


>A4G8B5.1 A4G8B5_HERAR Transcriptional regulatory protein TctD
          Length = 233

 Score =  212 bits (539), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/117 (91%), Positives = 111/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGY  DCVKNGVEADSALSTQDFDLLILDLGLPKMSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYVTDCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRA  R
Sbjct: 61  EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTR 117


>A6T206.1 A6T206_JANMA Two-components system response regulator
          Length = 233

 Score =  209 bits (533), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 106/117 (90%), Positives = 110/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGYA DCVKNG EADS LSTQDFDLLILDLGLPKMSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYATDCVKNGAEADSVLSTQDFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRA  R
Sbjct: 61  EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTR 117


>F1VW25.1 F1VW25_9BURK Response regulators consisting of a CheY-like receiver
           domain and a winged-helix DNA-binding domain
          Length = 228

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/117 (90%), Positives = 110/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGYA DCV NGVEAD ALSTQDFDLLILDLGLP+MSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYATDCVHNGVEADLALSTQDFDLLILDLGLPRMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVLR+LRARNS LPVLILTAADS+EQRV+GLDLGADDYMAKPFALSELEARVRA  R
Sbjct: 61  EVLRKLRARNSHLPVLILTAADSIEQRVKGLDLGADDYMAKPFALSELEARVRALTR 117


>A3N689.1 A3N689_BURP6 DNA-binding response regulator
          Length = 247

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 109/117 (93%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLPKMSGL
Sbjct: 1   MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRA  R
Sbjct: 61  EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTR 117