BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0135.p (250 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRK5.1 D8IRK5_HERSS Transcription regulator protein 295 4e-78 E2XQR9.1 E2XQR9_PSEFL Transcriptional regulator, LysR family 279 2e-73 C3K8L3.1 C3K8L3_PSEFS Putative LysR-family regulatory protein 266 3e-69 C6AZT5.1 C6AZT5_RHILS Transcriptional regulator, LysR family 253 1e-65 F0LDJ1.1 F0LDJ1_9RHIZ Transcriptional regulator, LysR family 250 1e-64 >D8IRK5.1 D8IRK5_HERSS Transcription regulator protein Length = 281 Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 160/278 (57%), Positives = 198/278 (71%), Gaps = 36/278 (12%) Query: 5 QRPLDLDAVQAFVLVADMQSFTRAAEALYTTQSAISLKLKRLEERLGRRLLERTPRQVRL 64 ++PLDLDAVQAFVL AD+ SFTRAAEAL +TQSA+SLKLK+LE+RLGRRLLERTPRQVRL Sbjct: 2 EKPLDLDAVQAFVLAADLHSFTRAAEALESTQSAVSLKLKKLEQRLGRRLLERTPRQVRL 61 Query: 65 SADGIGFLDAARNLLTAHEKALGRMETSTVRLSLGIS----------------------- 101 SA+G FL AAR LL AHE+AL +++ VR S+GIS Sbjct: 62 SAEGQQFLPAARELLAAHERALEQLDQGPVRFSVGISDHVAGASLPRALAQVHALDPGVV 121 Query: 102 -------------XYDRGELEAVIVRRDGERSDGELIQEERMGWFAAPQWQPRAGEPLRL 148 Y+RGEL+AVIVRR+ + G+L+ EER+GWFA P Q AG LR+ Sbjct: 122 VEVRVASSHDLMPLYERGELDAVIVRREPQDRGGKLVMEERIGWFAHPDAQCWAGGALRV 181 Query: 149 ATFSPSCGIRELAVRRLEDAGIPWIEVFVGGGVHAVAAAVTAGLAVTALLYRVKPAGAID 208 ATFS +C IREL++RRL+ AGI W+EVFVGGG+ AV AAV+AGLAV+ALLYR P GA+D Sbjct: 182 ATFSQACRIRELSLRRLDAAGIAWVEVFVGGGILAVGAAVSAGLAVSALLYRSAPPGAVD 241 Query: 209 VGKSMKLPSLPLAQVMLHTSVRDTRAQGVLRTVVAAMK 246 VG+ + LP LPLAQV LH+ +++ R QG LR +VAA+K Sbjct: 242 VGERLGLPRLPLAQVRLHSRLKEARLQGALRGLVAALK 279 >E2XQR9.1 E2XQR9_PSEFL Transcriptional regulator, LysR family Length = 290 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/283 (54%), Positives = 186/283 (65%), Gaps = 37/283 (13%) Query: 1 MEPTQRPLDLDAVQAFVLVADMQSFTRAAEALYTTQSAISLKLKRLEERLGRRLLERTPR 60 M T +PLD+D VQAFVLVAD SFTRAAEAL T+Q+AISLKLKRLEERLG RLLERTPR Sbjct: 1 MTDTSKPLDIDTVQAFVLVADFASFTRAAEALDTSQAAISLKLKRLEERLGYRLLERTPR 60 Query: 61 QVRLSADGIGFLDAARNLLTAHEKALGRM-ETSTVRLSLGIS------------------ 101 QVRLS G F+ AAR LL AHE+ALG M T+ RL +GIS Sbjct: 61 QVRLSPRGELFIVAARALLNAHERALGDMGSTAPRRLVIGISDHVAGPDLPIWLSRMAAY 120 Query: 102 ------------------XYDRGELEAVIVRRDGERSDGELIQEERMGWFAAPQWQPRAG 143 +DR EL+AVIVR +G+R DGE++ ER GWFAAP WQ G Sbjct: 121 DPLVILEVRIASSRDLMAAFDRNELDAVIVRNEGDRQDGEVLAVERFGWFAAPAWQHSPG 180 Query: 144 EPLRLATFSPSCGIRELAVRRLEDAGIPWIEVFVGGGVHAVAAAVTAGLAVTALLYRVKP 203 +PLR+AT + CG+R LA R L+ A I WIEVFVGGGV AV AAV+AGL V AL YRV P Sbjct: 181 QPLRMATMAAPCGVRHLATRALDTACIDWIEVFVGGGVMAVGAAVSAGLGVAALAYRVAP 240 Query: 204 AGAIDVGKSMKLPSLPLAQVMLHTSVRDTRAQGVLRTVVAAMK 246 AGA+DV + LP LP+++V+L++ + D R++ LR + A + Sbjct: 241 AGAVDVSEQYDLPPLPMSEVVLYSRINDGRSKDTLRALSATFR 283 >C3K8L3.1 C3K8L3_PSEFS Putative LysR-family regulatory protein Length = 288 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 146/284 (51%), Positives = 182/284 (64%), Gaps = 37/284 (13%) Query: 1 MEPTQRPLDLDAVQAFVLVADMQSFTRAAEALYTTQSAISLKLKRLEERLGRRLLERTPR 60 M +PLD+D VQAFV VAD SFTRAAEAL T+Q+AISLKLKRLEERLG RLLERTPR Sbjct: 1 MTDALKPLDIDTVQAFVRVADFASFTRAAEALDTSQAAISLKLKRLEERLGYRLLERTPR 60 Query: 61 QVRLSADGIGFLDAARNLLTAHEKALGRMETSTVR-LSLGIS------------------ 101 VRLS G F+ AAR LL AHE+ALG M + +R L +GIS Sbjct: 61 HVRLSPQGEHFIVAARALLNAHERALGDMASHALRRLVIGISDHVAGPDLPTWLSRLAAY 120 Query: 102 ------------------XYDRGELEAVIVRRDGERSDGELIQEERMGWFAAPQWQPRAG 143 +DR EL+AVIVR +G+R DGE++ ER GWFAAP WQ G Sbjct: 121 DPLVILEVRIASSRELVAAFDRNELDAVIVRNEGDRQDGEVLAVERFGWFAAPTWQHSPG 180 Query: 144 EPLRLATFSPSCGIRELAVRRLEDAGIPWIEVFVGGGVHAVAAAVTAGLAVTALLYRVKP 203 PLR+AT + CG+R LA R L+ A I W EVFVGGGV AV AAV+AGL V AL +RV P Sbjct: 181 TPLRMATMAAPCGVRHLATRALDAARIDWTEVFVGGGVMAVGAAVSAGLGVAALAHRVAP 240 Query: 204 AGAIDVGKSMKLPSLPLAQVMLHTSVRDTRAQGVLRTVVAAMKN 247 +GA+DV + LP+LP+++V+L++ + D R++ LR + A + Sbjct: 241 SGAVDVSEQYGLPTLPVSEVVLYSRISDGRSKETLRALSATFRG 284 >C6AZT5.1 C6AZT5_RHILS Transcriptional regulator, LysR family Length = 283 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 182/275 (66%), Gaps = 36/275 (13%) Query: 8 LDLDAVQAFVLVADMQSFTRAAEALYTTQSAISLKLKRLEERLGRRLLERTPRQVRLSAD 67 LD+DAV+AFV +A++QSFTRAAEAL +TQ+AIS+KLKRLEERLG RL+ERTPR VRLSA Sbjct: 2 LDVDAVRAFVTIAELQSFTRAAEALGSTQAAISVKLKRLEERLGHRLIERTPRLVRLSAQ 61 Query: 68 GIGFLDAARNLLTAHEKALGRMETSTVRLSLGISX------------------------- 102 G FL +AR+ + AH++A+ + +++ +LGI+ Sbjct: 62 GAVFLQSARDFIGAHDRAVAALSSTSRHFTLGIAAHVAGPEVPTILARLSAHDPGLTIEV 121 Query: 103 -----------YDRGELEAVIVRRDGERSDGELIQEERMGWFAAPQWQPRAGEPLRLATF 151 +DRGEL+A I+RR+ +R DGE++ E GWFAAPQ++ R GEPLRLA Sbjct: 122 RLDNSRVLLDAFDRGELDAAIIRREEDRRDGEVLGPEHFGWFAAPQFEYRRGEPLRLAAL 181 Query: 152 SPSCGIRELAVRRLEDAGIPWIEVFVGGGVHAVAAAVTAGLAVTALLYRVKPAGAIDVGK 211 SPSCG+ +A L+ AGI W EVF+GGG + AAV+AGLAV A +R+ P G+++V + Sbjct: 182 SPSCGVHNIATHALDGAGIAWNEVFLGGGSLVMTAAVSAGLAVAAFSHRLAPVGSMEVSQ 241 Query: 212 SMKLPSLPLAQVMLHTSVRDTRAQGVLRTVVAAMK 246 LP LP ++++LH+++ D R++ LRT+ AA + Sbjct: 242 RFSLPPLPSSEIVLHSTLTDARSRSALRTLAAAFR 276 >F0LDJ1.1 F0LDJ1_9RHIZ Transcriptional regulator, LysR family Length = 296 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 130/276 (47%), Positives = 177/276 (64%), Gaps = 36/276 (13%) Query: 8 LDLDAVQAFVLVADMQSFTRAAEALYTTQSAISLKLKRLEERLGRRLLERTPRQVRLSAD 67 LD+DAVQAFV +AD+QSFTRAAE L TTQ AIS+KLKRLE+RLG+RLLERTPR VRLSA Sbjct: 18 LDVDAVQAFVTIADLQSFTRAAETLGTTQGAISVKLKRLEDRLGQRLLERTPRSVRLSAQ 77 Query: 68 GIGFLDAARNLLTAHEKALGRMETSTVRLSLGIS-------------------------- 101 G FL AR L AH++A+ + ++ R LGI+ Sbjct: 78 GAVFLTPAREFLAAHDRAMAGLFSTRRRFGLGIAAHVAGPEVPTLLARLNAHDPGLTIEV 137 Query: 102 ----------XYDRGELEAVIVRRDGERSDGELIQEERMGWFAAPQWQPRAGEPLRLATF 151 +DRGE++A I+RR+ +R DGE++ E GWFAAPQ++ R GEPLRLA Sbjct: 138 RMDNSRTLLDAFDRGEIDAAIIRREDDRRDGEVLGPEHFGWFAAPQFEHRQGEPLRLAAL 197 Query: 152 SPSCGIRELAVRRLEDAGIPWIEVFVGGGVHAVAAAVTAGLAVTALLYRVKPAGAIDVGK 211 SP+CG+R++A R L+ A I W EVF+GG V AAV+AGLA++A R+ P G I+V + Sbjct: 198 SPACGVRDIAARALDSAAIAWTEVFLGGTSSMVTAAVSAGLAISAFSCRLAPPGTIEVSQ 257 Query: 212 SMKLPSLPLAQVMLHTSVRDTRAQGVLRTVVAAMKN 247 LP LP ++++ +++ D+R++ LRT+ AA + Sbjct: 258 RFSLPPLPSTEIVMFSTLTDSRSREALRTLAAAFRE 293