BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0122.p         (171 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A1WSJ2.1 A1WSJ2_VEREI Threonine ammonia-lyase EC=4.3.1.19              75   4e-12
D8IRJ5.1 D8IRJ5_HERSS Threonine dehydratase protein EC=4.2.1.-         69   3e-10

>A1WSJ2.1 A1WSJ2_VEREI Threonine ammonia-lyase EC=4.3.1.19
          Length = 323

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 41/43 (95%)

Query: 1   MACRVPDEASLEVILNEVDEVIAVSDDEVAAAMKLYFTATHNV 43
           +ACRVPDE+SL VI ++V+E++AVSDDEVAAAMKLYFTATHNV
Sbjct: 231 VACRVPDESSLAVISDQVEEIMAVSDDEVAAAMKLYFTATHNV 273


>D8IRJ5.1 D8IRJ5_HERSS Threonine dehydratase protein EC=4.2.1.-
          Length = 351

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 39/44 (88%)

Query: 1   MACRVPDEASLEVILNEVDEVIAVSDDEVAAAMKLYFTATHNVA 44
           +ACRVPD+ASLEV+ +EVDEV+AV+DDEV  AMKL + ATHNVA
Sbjct: 239 VACRVPDQASLEVLFSEVDEVVAVTDDEVMDAMKLAYIATHNVA 282