BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0117.p         (150 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYK8.1 D8IYK8_HERSS ABC-type nitrate/sulfonate/bicarbonate tra...   165   2e-39
A6T1B2.1 A6T1B2_JANMA Sulfonate/nitrate transport system substra...   147   4e-34
F2LLM5.1 F2LLM5_BURGA Aliphatic sulfonates family ABC transporte...   144   4e-33
A4YXF9.1 A4YXF9_BRASO Putative ABC transporter, substrate-bindin...   144   5e-33
A5EGJ7.1 A5EGJ7_BRASB Putative ABC transporter, substrate-bindin...   143   9e-33

>D8IYK8.1 D8IYK8_HERSS ABC-type nitrate/sulfonate/bicarbonate transport
           system, periplasmic component protein
          Length = 328

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/127 (71%), Positives = 97/127 (76%), Gaps = 8/127 (6%)

Query: 22  FSIMTTQLQRRRLLQAIATMTSAAAAGSLALPA--FAQTGKPVQARIGYQKSSTLLTVLK 79
            S  +T   RRRLL A     +A   GS   PA  FAQ  K +  RIGYQKSSTLLT+LK
Sbjct: 1   MSKHSTDSTRRRLLHA----ATALGLGSALAPASVFAQGNKAI--RIGYQKSSTLLTILK 54

Query: 80  TNGTLEKLLAPLNVKISWHEFSSGLPLLEALNVGGVDLSADVADTVPVFAQAAGAKLTYV 139
            NGTLEKLLAP   KISWHEF+SGLPLLEALNVGGVDLSADVADTVPVFAQAAGAKL YV
Sbjct: 55  ANGTLEKLLAPTGAKISWHEFASGLPLLEALNVGGVDLSADVADTVPVFAQAAGAKLAYV 114

Query: 140 AQEAPSP 146
           AQE+PSP
Sbjct: 115 AQESPSP 121


>A6T1B2.1 A6T1B2_JANMA Sulfonate/nitrate transport system substrate-binding
           protein
          Length = 317

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 75/98 (76%), Positives = 84/98 (85%), Gaps = 3/98 (3%)

Query: 50  LALPAFAQT-GKPVQARIGYQKSSTLLTVLKTNGTLEKLLAPLNVKISWHEFSSGLPLLE 108
            ALPA AQ  G  V  RIGYQKSSTL+TVLKT GTLE+ L  L VK+SWHEF+SGLPLLE
Sbjct: 21  FALPAHAQKAGDTV--RIGYQKSSTLITVLKTRGTLEQRLGALGVKVSWHEFASGLPLLE 78

Query: 109 ALNVGGVDLSADVADTVPVFAQAAGAKLTYVAQEAPSP 146
           ALNVG +D+SADVADTVPVFAQAAGA+LTY+AQE+PSP
Sbjct: 79  ALNVGAIDVSADVADTVPVFAQAAGAQLTYIAQESPSP 116


>F2LLM5.1 F2LLM5_BURGA Aliphatic sulfonates family ABC transporter,
           periplasmic ligand-binding protein
          Length = 329

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 92/120 (76%), Gaps = 5/120 (4%)

Query: 27  TQLQRRRLLQAIATMTSAAAAGSLALPAFAQTGKPVQARIGYQKSSTLLTVLKTNGTLEK 86
           ++L RR   +++ T+T  AAAG LA    AQ G P   RIGYQKSSTL+T+LK  GTLEK
Sbjct: 2   SRLTRRAFSRSLLTLT-LAAAGPLAR---AQ-GAPGVLRIGYQKSSTLITLLKARGTLEK 56

Query: 87  LLAPLNVKISWHEFSSGLPLLEALNVGGVDLSADVADTVPVFAQAAGAKLTYVAQEAPSP 146
            LAPLN ++ WHEF+SGLPL EALNVG VD SADVADTVPVFAQAA A+  Y+AQEAPSP
Sbjct: 57  ALAPLNTRVEWHEFASGLPLTEALNVGAVDFSADVADTVPVFAQAAQARFVYLAQEAPSP 116


>A4YXF9.1 A4YXF9_BRASO Putative ABC transporter, substrate-binding protein;
           putative aliphatic sulphonates transporter
          Length = 309

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/82 (79%), Positives = 75/82 (91%)

Query: 65  RIGYQKSSTLLTVLKTNGTLEKLLAPLNVKISWHEFSSGLPLLEALNVGGVDLSADVADT 124
           RIGYQKSSTL+ +LKTNG LEK LAPL++K+SWHEFSSGLPLLEA+N+G +D+ ADVADT
Sbjct: 21  RIGYQKSSTLIALLKTNGELEKALAPLDIKVSWHEFSSGLPLLEAINIGSIDVGADVADT 80

Query: 125 VPVFAQAAGAKLTYVAQEAPSP 146
           VPVFAQAAGAKL YVA+EA SP
Sbjct: 81  VPVFAQAAGAKLAYVAEEAASP 102


>A5EGJ7.1 A5EGJ7_BRASB Putative ABC transporter, substrate-binding protein
          Length = 309

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 75/82 (91%)

Query: 65  RIGYQKSSTLLTVLKTNGTLEKLLAPLNVKISWHEFSSGLPLLEALNVGGVDLSADVADT 124
           RIGYQKSSTL+ +LKTNG LEK LAPL++K+SWHEFSSGLPLLEA+N+G +D+ ADVADT
Sbjct: 21  RIGYQKSSTLIALLKTNGELEKALAPLDIKVSWHEFSSGLPLLEAINIGSIDVGADVADT 80

Query: 125 VPVFAQAAGAKLTYVAQEAPSP 146
           VPVFAQAAGAK+ YVA+EA SP
Sbjct: 81  VPVFAQAAGAKIAYVAEEAASP 102