BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0108.p         (83 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYL7.1 D8IYL7_HERSS Succinyl-CoA ligase [ADP-forming] subunit ...   160   8e-38
A2RPV4.1 A2RPV4_HERSE Succinyl-CoA ligase [ADP-forming] subunit ...   160   8e-38
E5AKZ6.1 E5AKZ6_BURRH Succinyl-CoA ligase [ADP-forming] subunit ...   159   1e-37
D8NYA4.1 D8NYA4_RALSO Succinyl-CoA ligase [ADP-forming] subunit ...   158   3e-37
B2UGE3.1 B2UGE3_RALPJ Succinyl-CoA ligase [ADP-forming] subunit ...   158   3e-37

>D8IYL7.1 D8IYL7_HERSS Succinyl-CoA ligase [ADP-forming] subunit alpha
           EC=6.2.1.5
          Length = 293

 Score =  160 bits (404), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 77/83 (92%), Positives = 80/83 (96%)

Query: 1   MIGEIGGPDEANASYWVKDNMKKPVIGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 60
           MIGEIGGPDEANA+ W+KDNMKKPV+GFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI
Sbjct: 211 MIGEIGGPDEANAARWIKDNMKKPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 270

Query: 61  MEECGIKATRNPSEMARLLKSVL 83
           MEECGIK TRNPSEM RLLKSVL
Sbjct: 271 MEECGIKVTRNPSEMGRLLKSVL 293


>A2RPV4.1 A2RPV4_HERSE Succinyl-CoA ligase [ADP-forming] subunit alpha
           EC=6.2.1.5
          Length = 293

 Score =  160 bits (404), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 77/83 (92%), Positives = 80/83 (96%)

Query: 1   MIGEIGGPDEANASYWVKDNMKKPVIGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 60
           MIGEIGGPDEANA+ W+KDNMKKPV+GFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI
Sbjct: 211 MIGEIGGPDEANAARWIKDNMKKPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 270

Query: 61  MEECGIKATRNPSEMARLLKSVL 83
           MEECGIK TRNPSEM RLLKSVL
Sbjct: 271 MEECGIKVTRNPSEMGRLLKSVL 293


>E5AKZ6.1 E5AKZ6_BURRH Succinyl-CoA ligase [ADP-forming] subunit alpha
           EC=6.2.1.5
          Length = 313

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/83 (91%), Positives = 79/83 (95%)

Query: 1   MIGEIGGPDEANASYWVKDNMKKPVIGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 60
           MIGEIGGPDEANASYW+KDNMKKPV+GFIAGVTAPPGKRMGHAGALISGGADTAEAKL I
Sbjct: 231 MIGEIGGPDEANASYWIKDNMKKPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEI 290

Query: 61  MEECGIKATRNPSEMARLLKSVL 83
           ME CGIK T+NPSEM RLLKSVL
Sbjct: 291 MESCGIKVTKNPSEMGRLLKSVL 313


>D8NYA4.1 D8NYA4_RALSO Succinyl-CoA ligase [ADP-forming] subunit alpha
           EC=6.2.1.5
          Length = 293

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/83 (89%), Positives = 81/83 (97%)

Query: 1   MIGEIGGPDEANASYWVKDNMKKPVIGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 60
           MIGEIGGPDEANA+YW+KDNMKKPV+GFIAGVTAPPGKRMGHAGALISGGADTA+AKL I
Sbjct: 211 MIGEIGGPDEANAAYWIKDNMKKPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDI 270

Query: 61  MEECGIKATRNPSEMARLLKSVL 83
           MEECGIKAT+NPSEM RLLK++L
Sbjct: 271 MEECGIKATKNPSEMGRLLKALL 293


>B2UGE3.1 B2UGE3_RALPJ Succinyl-CoA ligase [ADP-forming] subunit alpha
           EC=6.2.1.5
          Length = 293

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/83 (89%), Positives = 81/83 (97%)

Query: 1   MIGEIGGPDEANASYWVKDNMKKPVIGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAI 60
           MIGEIGGPDEANA+YW+KDNMKKPV+GFIAGVTAPPGKRMGHAGALISGGADTA+AKL I
Sbjct: 211 MIGEIGGPDEANAAYWIKDNMKKPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDI 270

Query: 61  MEECGIKATRNPSEMARLLKSVL 83
           MEECGIK T+NPSEMARLLK++L
Sbjct: 271 MEECGIKTTKNPSEMARLLKAML 293