BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0085.p         (200 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IZ79.1 D8IZ79_HERSS Peptide methionine sulfoxide reductase Msr...   308   3e-82
A4G887.1 A4G887_HERAR Peptide methionine sulfoxide reductase Msr...   301   3e-80
A6T1Y2.1 A6T1Y2_JANMA Peptide methionine sulfoxide reductase Msr...   298   4e-79
B3R5R1.1 B3R5R1_CUPTR Peptide methionine sulfoxide reductase Msr...   254   4e-66
Q474J2.1 Q474J2_CUPPJ Peptide methionine sulfoxide reductase Msr...   254   5e-66

>D8IZ79.1 D8IZ79_HERSS Peptide methionine sulfoxide reductase MsrA 1
           EC=1.8.4.11
          Length = 183

 Score =  308 bits (789), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 142/176 (80%), Positives = 158/176 (89%)

Query: 25  STETAVLGGGCFWCLEAVYQQLKGVQHVESGYTGGHVKNPTYEQVCAGDTGHAEVVKLSF 84
           + E AVLGGGCFWCLEAVYQQ++GV+ VESGYTGG V NP+YEQVC G TGHAEVVKL+F
Sbjct: 8   AKEIAVLGGGCFWCLEAVYQQVRGVESVESGYTGGSVVNPSYEQVCGGQTGHAEVVKLAF 67

Query: 85  DPALISFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYYNSPAQYDTAKHIIAEMALVW 144
           DP  IS+RE+LE+FFTIHDPTTLNRQGNDVGTQYRSVIYY   AQ+DTA+HIIAEMALVW
Sbjct: 68  DPQQISYRELLEIFFTIHDPTTLNRQGNDVGTQYRSVIYYQDEAQHDTARHIIAEMALVW 127

Query: 145 DAPLVTELSPVETYYKAEDYHQNYFQQHPFQGYCAFVVAPKLAKFREVFAAKSRQE 200
           DAP+VTELSP + YY+AEDYHQNYF QHPFQGYCAFVVAPK+AK REVFA KS+ E
Sbjct: 128 DAPIVTELSPPQPYYRAEDYHQNYFVQHPFQGYCAFVVAPKVAKLREVFAEKSKPE 183


>A4G887.1 A4G887_HERAR Peptide methionine sulfoxide reductase MsrA
           EC=1.8.4.11
          Length = 179

 Score =  301 bits (772), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 133/176 (75%), Positives = 156/176 (88%)

Query: 25  STETAVLGGGCFWCLEAVYQQLKGVQHVESGYTGGHVKNPTYEQVCAGDTGHAEVVKLSF 84
           +TE A LGGGCFWC EAV+QQ+KG+  +ESGYTGG V NP+YEQ+C G TGHAEVV+L+F
Sbjct: 2   TTEIATLGGGCFWCTEAVFQQMKGITAIESGYTGGQVANPSYEQICEGTTGHAEVVRLTF 61

Query: 85  DPALISFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYYNSPAQYDTAKHIIAEMALVW 144
           DPA++SFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYY++P Q D A+H++AEMA VW
Sbjct: 62  DPAVVSFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYYHTPEQQDMARHVMAEMANVW 121

Query: 145 DAPLVTELSPVETYYKAEDYHQNYFQQHPFQGYCAFVVAPKLAKFREVFAAKSRQE 200
           DAP+VTELSP ETYYKAEDYHQNYF+Q+P QGYCAF+VAPK+AKFR+ F  K R +
Sbjct: 122 DAPIVTELSPAETYYKAEDYHQNYFRQNPLQGYCAFIVAPKVAKFRQTFRDKIRAD 177


>A6T1Y2.1 A6T1Y2_JANMA Peptide methionine sulfoxide reductase MsrA 2
           EC=1.8.4.11
          Length = 179

 Score =  298 bits (762), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 131/172 (76%), Positives = 154/172 (89%)

Query: 25  STETAVLGGGCFWCLEAVYQQLKGVQHVESGYTGGHVKNPTYEQVCAGDTGHAEVVKLSF 84
           + E A LGGGCFWC EAV+QQLKG++ VESGYTGGHV+NP YEQ+C G TGHAEVV+L++
Sbjct: 2   AMEIATLGGGCFWCTEAVFQQLKGIKAVESGYTGGHVENPVYEQICEGTTGHAEVVRLTY 61

Query: 85  DPALISFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYYNSPAQYDTAKHIIAEMALVW 144
           DP ++SFREILE+FFTIHDPTTLNRQGNDVGTQYRSVIYY+SP Q DTAKH+I+EMA VW
Sbjct: 62  DPEIVSFREILEIFFTIHDPTTLNRQGNDVGTQYRSVIYYHSPEQQDTAKHVISEMANVW 121

Query: 145 DAPLVTELSPVETYYKAEDYHQNYFQQHPFQGYCAFVVAPKLAKFREVFAAK 196
           DAP+VTELSP ETYYKAE YHQNYF+ +P QGYCAF+VAPK++KFR+ F+ K
Sbjct: 122 DAPIVTELSPAETYYKAESYHQNYFRMNPMQGYCAFIVAPKVSKFRKTFSDK 173


>B3R5R1.1 B3R5R1_CUPTR Peptide methionine sulfoxide reductase MsrA
           EC=1.8.4.11
          Length = 180

 Score =  254 bits (650), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 148/175 (84%), Gaps = 2/175 (1%)

Query: 27  ETAVLGGGCFWCLEAVYQQLKGVQHVESGYTGGHVKNPTYEQVCAGDTGHAEVVKLSFDP 86
           ETA LGGGCFWCLEAVYQQ++GV  VESGYTGGHV +PTY+QVCAGDTGH EVV++SFDP
Sbjct: 6   ETATLGGGCFWCLEAVYQQVEGVVAVESGYTGGHVDHPTYQQVCAGDTGHVEVVRVSFDP 65

Query: 87  ALISFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYYNSPAQYDTAKHIIAEMAL--VW 144
           ++I++REILE+FF IHDPTT +RQGNDVG QYRS I+ +S AQ  TA++++ E+A   V+
Sbjct: 66  SVINYREILEIFFAIHDPTTPDRQGNDVGPQYRSAIFTHSEAQRATAEYVMRELAAAKVF 125

Query: 145 DAPLVTELSPVETYYKAEDYHQNYFQQHPFQGYCAFVVAPKLAKFREVFAAKSRQ 199
           DAP+VT++ P + Y++AE  HQNY+Q HP QGYCAFV++PKLAKFR+ F AK R+
Sbjct: 126 DAPIVTQVEPEQPYWRAEASHQNYYQDHPSQGYCAFVISPKLAKFRKQFGAKLRK 180


>Q474J2.1 Q474J2_CUPPJ Peptide methionine sulfoxide reductase MsrA 1
           EC=1.8.4.11
          Length = 180

 Score =  254 bits (649), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 149/175 (85%), Gaps = 2/175 (1%)

Query: 27  ETAVLGGGCFWCLEAVYQQLKGVQHVESGYTGGHVKNPTYEQVCAGDTGHAEVVKLSFDP 86
           +TA LGGGCFWCLEAVYQQ+ GV+ VESGYTGGHV +P+Y+QV  GDTGHAEV++++FDP
Sbjct: 6   DTATLGGGCFWCLEAVYQQVNGVRAVESGYTGGHVSHPSYQQVSEGDTGHAEVIRVTFDP 65

Query: 87  ALISFREILEVFFTIHDPTTLNRQGNDVGTQYRSVIYYNSPAQYDTAKHIIAEMAL--VW 144
           A+I++REI+E+FF IHDPTTLNRQGNDVG QYRS+I+ +S AQ   A++++ E+    V+
Sbjct: 66  AVINYREIIEIFFAIHDPTTLNRQGNDVGPQYRSIIFTHSEAQRAVAEYVMRELVANKVF 125

Query: 145 DAPLVTELSPVETYYKAEDYHQNYFQQHPFQGYCAFVVAPKLAKFREVFAAKSRQ 199
           DAP+VT++ P + Y++AE  HQNYFQ+HP QGYCAFV++PK+AKFRE FA+K R+
Sbjct: 126 DAPIVTQIEPEQPYWRAEASHQNYFQEHPSQGYCAFVISPKVAKFRERFASKLRR 180