BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0037.p (375 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZC3.1 D8IZC3_HERSS LysR family transcription regulator protein 330 3e-88 D3NXB0.1 D3NXB0_AZOS1 Transcriptional regulator 150 3e-34 A7II47.1 A7II47_XANP2 Transcriptional regulator, LysR family 147 2e-33 B5WF87.1 B5WF87_9BURK Transcriptional regulator, LysR family 145 1e-32 C5ACL6.1 C5ACL6_BURGB Transcriptional regulator, LysR family pro... 145 1e-32 >D8IZC3.1 D8IZC3_HERSS LysR family transcription regulator protein Length = 283 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 163/240 (67%), Positives = 192/240 (80%), Gaps = 16/240 (6%) Query: 16 ADWEGLRTFAAFIESGSFSGAARVLGVTHATVSRRLQTLEHALHGPLFTRRGDDTELTRL 75 ADWE LR+FAAF+++GSFSGAARVLGVTHAT+ RRLQ LE L PLF RR DD ELTRL Sbjct: 3 ADWESLRSFAAFVDAGSFSGAARVLGVTHATIGRRLQQLEQTLAAPLFIRRADDIELTRL 62 Query: 76 GETVLSAAREMQAQTAQLARRLAGEDIRMEGKLRIASTEAMATMFLAPRLPALLERWPQL 135 GE+VL+AAR MQ QT QLAR LAGED+RMEGKLR+A T+AM T+FLAPRLP+LL++WP L Sbjct: 63 GESVLAAARAMQDQTRQLARTLAGEDLRMEGKLRLACTDAMGTLFLAPRLPSLLQQWPAL 122 Query: 136 DIEFSMSHQTVSLARRDADLAIRFARPQDGDLIARKLGKISYFLCGSRERVAEWRARAAP 195 DIE +M HQT+SLARR+ADLA+RFARPQDG+LIAR+LG + ++LCG+ ++VA WR + Sbjct: 123 DIELAMGHQTLSLARREADLALRFARPQDGELIARRLGVVRFYLCGTADQVAAWRHQ--- 179 Query: 196 GSAPFIGXRARAAPGSAPFIGFDDGVPDIPETQWLADHAGGNPVRFRSTSLVTQCMAARA 255 GSAP IG+DD VPDIPET+WLA HA GNPVR RS SLV QCMAARA Sbjct: 180 -------------RGSAPVIGYDDSVPDIPETRWLAAHADGNPVRLRSASLVAQCMAARA 226 >D3NXB0.1 D3NXB0_AZOS1 Transcriptional regulator Length = 314 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/239 (41%), Positives = 129/239 (53%), Gaps = 26/239 (10%) Query: 17 DWEGLRTFAAFIESGSFSGAARVLGVTHATVSRRLQTLEHALHGPLFTRRGDDTELTRLG 76 DW+ LR F +GS S AAR L ++HATV RRL LE L L RR D LT G Sbjct: 30 DWDDLRVFLELARTGSLSAAARGLRLSHATVGRRLAALEATLGRGLMERRPDGYVLTGEG 89 Query: 77 ETVLSAAREMQAQTAQLARRLAGEDIRMEGKLRIASTEAMATMFLAPRLPALLERWPQLD 136 E+V + A M + AQ RR G D + G +R+ T+A+A +FL PRL L P LD Sbjct: 90 ESVRALAEAMD-ERAQAIRRREGGDTGLTGTVRLTMTQALADLFLIPRLGPLRAANPALD 148 Query: 137 IEFSMSHQTVSLARRDADLAIRFARPQDGDLIARKLGKISYFLCGSRERVAEWRARAAPG 196 +E + ++T+SLARR+ADLAIR A+PQ GDL+ R+L + Y L AAPG Sbjct: 149 LEIIVDNRTLSLARREADLAIRLAQPQRGDLVGRRLATLGYGLY------------AAPG 196 Query: 197 SAPFIGXRARAAPGSAPFIGFDDGVPDIPETQWLADHAGGNPVRFRSTSLVTQCMAARA 255 AP + I +DD + ++PE WL H GG V FR S+ Q AA A Sbjct: 197 -----------APDT--LIAYDDSMAELPEALWLDRHGGGRRVAFRCNSVQGQLAAAVA 242 >A7II47.1 A7II47_XANP2 Transcriptional regulator, LysR family Length = 303 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 134/244 (54%), Gaps = 24/244 (9%) Query: 17 DWEGLRTFAAFIESGSFSGAARVLGVTHATVSRRLQTLEHALHGPLFTRRGDDTELTRLG 76 DWE R FAA GS S AR LGV HATV+RR+ +E AL LF RR D LT G Sbjct: 10 DWEDARFFAALARHGSLSATARALGVNHATVARRVAAMEQALGEKLFERRPDGYALTAAG 69 Query: 77 ETVLSAAREMQAQTAQLARRLAGEDIRMEGKLRIASTEAMATMFLAPRLPALLERWPQLD 136 L AA M+ +L R A E+ + G +RIA+T ++A ++L R AL +R P +D Sbjct: 70 TRALEAADAMEKAARRLLR--AQEERPLGGLVRIAATPSLADLYLVSRFAALAQRHPGID 127 Query: 137 IEFSMSHQTVSLARRDADLAIRFARPQ-----DGDLIARKLGKISYFLCGSRERVAEWRA 191 IE + SLARR+AD+A+R P+ D D+IAR+L +++ G+ A+WR Sbjct: 128 IEIVSDRRLASLARREADIALRLGAPKDARGVDADVIARRLATLAFGYYGT----ADWRG 183 Query: 192 RAAPGSAPFIGXRARAAPGSAPFIGFDDGVPDIPETQWLADHAGGNPVRFRSTSLVTQCM 251 R A G+AP F+GFD+ +PE+ +LA H + + R+ + TQ + Sbjct: 184 RIAAGAAPV-------------FVGFDEANAHLPESAFLARHFPRSRLAVRANTQSTQAI 230 Query: 252 AARA 255 AARA Sbjct: 231 AARA 234 >B5WF87.1 B5WF87_9BURK Transcriptional regulator, LysR family Length = 302 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/254 (38%), Positives = 129/254 (50%), Gaps = 19/254 (7%) Query: 17 DWEGLRTFAAFIESGSFSGAARVLGVTHATVSRRLQTLEHALHGPLFTRRGDDTELTRLG 76 DWE +R F A + GS S AAR L VTHAT+SRR+Q+LE +L L RR + LT G Sbjct: 10 DWEDVRVFVALVRYGSLSAAARALTVTHATISRRVQSLEKSLGAKLVERRPNGYVLTPAG 69 Query: 77 ETVLSAAREMQAQTAQLARRLAGEDIRMEGKLRIASTEAMATMFLAPRLPALLERWPQLD 136 +LS AREM+ ++L R G D G +R+ + ++A FLA L AL P LD Sbjct: 70 TEILSVAREMEVSASKLMR--GGADDTPRGLVRVNAPPSLAQGFLAEPLAALTVLHPSLD 127 Query: 137 IEFSMSHQTVSLARRDADLAIRFARPQDGDLIARKLGKISYFLCGSRERVAEWRARAAPG 196 I+ S + V L RR+AD+A+RF + +D D+IA+ L + S A+W R G Sbjct: 128 IDLSSDFRAVGLERREADIAVRFGQAKDSDVIAKLLVTAGFGFYAS----AQWLKRIEAG 183 Query: 197 SAPFIGXRARAAPGSAPFIGFDDGVPDIPETQWLADHAGGNPVRFRSTSLVTQCMAARAR 256 P F+GFD+ +PE WLA FR S +TQ AAR+ Sbjct: 184 EPP-------------TFVGFDEANASLPEAAWLAQEFPRARTAFRGNSHMTQAAAARSG 230 Query: 257 ARVXGAAASAGRAG 270 A V GR G Sbjct: 231 AGVALLPDFVGRHG 244 >C5ACL6.1 C5ACL6_BURGB Transcriptional regulator, LysR family protein Length = 294 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 117/217 (53%), Gaps = 19/217 (8%) Query: 17 DWEGLRTFAAFIESGSFSGAARVLGVTHATVSRRLQTLEHALHGPLFTRRGDDTELTRLG 76 DWE LR F A GS S AAR L V+HAT+SRR+Q+LEHAL L RR D LT G Sbjct: 10 DWEDLRVFVALARHGSLSAAARALSVSHATISRRIQSLEHALGERLVERRPDGYVLTPAG 69 Query: 77 ETVLSAAREMQAQTAQLARRLAGEDIRMEGKLRIASTEAMATMFLAPRLPALLERWPQLD 136 L+ A EM+ +L+R G D G +R+ + ++ FL RL L+ R P LD Sbjct: 70 TRALAGASEMETAAERLSR--GGRDDSPRGLVRLNAPPSLVQHFLIARLATLVARHPSLD 127 Query: 137 IEFSMSHQTVSLARRDADLAIRFARPQDGDLIARKLGKISYFLCGSRERVAEWRARAAPG 196 I+ + + VSL RR+AD+A+RF RP DGD+IA+ + Y + +W +R A G Sbjct: 128 IDVASDFRAVSLDRREADIALRFGRPGDGDVIAKSVATPGYGFYAT----PQWASRLAAG 183 Query: 197 SAPFIGXRARAAPGSAPFIGFDDGVPDIPETQWLADH 233 AP F+GFD+ +PE WLA H Sbjct: 184 EAPV-------------FVGFDEANAHLPEAVWLARH 207