BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0035.p         (150 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J1P8.1 D8J1P8_HERSS Transcription regulator protein                 167   3e-40
Q8P7F2.1 Q8P7F2_XANCP Transcriptional regulator                       101   3e-20
Q4UWP8.1 Q4UWP8_XANC8 Transcriptional regulator                       101   3e-20
B0RQW6.1 B0RQW6_XANCB Transcriptional regulator, MarR family          101   3e-20
F0C4N4.1 F0C4N4_9XANT Transcriptional regulator                        95   4e-18

>D8J1P8.1 D8J1P8_HERSS Transcription regulator protein
          Length = 145

 Score =  167 bits (424), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/130 (64%), Positives = 98/130 (75%)

Query: 5   CTCTRLRRLTRRITSIYDRHLLPDALTISQYSLLSRVGRHGSIANLRLAAEMGMDRSTLS 64
           CTC  LRRLTRRIT +YD HL    L+I+QYSL+SR+GR G IAN+ LA +MGMDRSTLS
Sbjct: 6   CTCAPLRRLTRRITVLYDHHLQDCELSITQYSLISRIGRKGPIANITLAQDMGMDRSTLS 65

Query: 65  RNIKPLMAAGWIATVDMPPDEQVDKRSFGLGLSEAGQAKLAAARPNWVAAQLEIDGLLGE 124
           R +KPLMAAGWI TVD+P D Q+DKRSF L LS+ G+AKL  ARP W  AQ EID LLG 
Sbjct: 66  RALKPLMAAGWIETVDLPADAQLDKRSFALQLSQDGRAKLEQARPYWRRAQDEIDRLLGP 125

Query: 125 DLHAALSGMI 134
           DL    + +I
Sbjct: 126 DLARNFNDLI 135


>Q8P7F2.1 Q8P7F2_XANCP Transcriptional regulator
          Length = 140

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 11/134 (8%)

Query: 2   FNQCTCTRLRRLTRRITSIYDRHLLPDALTISQYSLLSRVGRHGSIANLRLAAEMGMDRS 61
            ++CTC  LRR  RR++ +YD  L P  L++++YS+L R+    S+  L  A+ +GMDR+
Sbjct: 4   LSRCTCFHLRRAARRVSQLYDHALAPVGLSLNEYSILRRLEVAQSLGTL--ASTLGMDRT 61

Query: 62  TLSRNIKPLMAAGWIATVDMPPDEQVDKRSFGLGLSEAGQAKLAAARPNWVAAQLEIDGL 121
           TL+RN+KPL+AAGWI T         D R   + LS +G+  L  ARP+W AAQ++++ L
Sbjct: 62  TLTRNLKPLLAAGWITT-----QRGEDARQKWVRLSRSGRGLLVRARPHWHAAQVQLETL 116

Query: 122 LG----EDLHAALS 131
            G      LHA L+
Sbjct: 117 FGAAPTAQLHATLA 130


>Q4UWP8.1 Q4UWP8_XANC8 Transcriptional regulator
          Length = 140

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 11/134 (8%)

Query: 2   FNQCTCTRLRRLTRRITSIYDRHLLPDALTISQYSLLSRVGRHGSIANLRLAAEMGMDRS 61
            ++CTC  LRR  RR++ +YD  L P  L++++YS+L R+    S+  L  A+ +GMDR+
Sbjct: 4   LSRCTCFHLRRAARRVSQLYDHALAPVGLSLNEYSILRRLEVAQSLGTL--ASTLGMDRT 61

Query: 62  TLSRNIKPLMAAGWIATVDMPPDEQVDKRSFGLGLSEAGQAKLAAARPNWVAAQLEIDGL 121
           TL+RN+KPL+AAGWI T         D R   + LS +G+  L  ARP+W AAQ++++ L
Sbjct: 62  TLTRNLKPLLAAGWITT-----QRGEDARQKWVRLSRSGRGLLVRARPHWHAAQVQLETL 116

Query: 122 LG----EDLHAALS 131
            G      LHA L+
Sbjct: 117 FGAAPTAQLHATLA 130


>B0RQW6.1 B0RQW6_XANCB Transcriptional regulator, MarR family
          Length = 140

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 11/134 (8%)

Query: 2   FNQCTCTRLRRLTRRITSIYDRHLLPDALTISQYSLLSRVGRHGSIANLRLAAEMGMDRS 61
            ++CTC  LRR  RR++ +YD  L P  L++++YS+L R+    S+  L  A+ +GMDR+
Sbjct: 4   LSRCTCFHLRRAARRVSQLYDHALAPVGLSLNEYSILRRLEVAQSLGTL--ASTLGMDRT 61

Query: 62  TLSRNIKPLMAAGWIATVDMPPDEQVDKRSFGLGLSEAGQAKLAAARPNWVAAQLEIDGL 121
           TL+RN+KPL+AAGWI T         D R   + LS +G+  L  ARP+W AAQ++++ L
Sbjct: 62  TLTRNLKPLLAAGWITT-----QRGEDARQKWVRLSRSGRGLLVRARPHWHAAQVQLETL 116

Query: 122 LG----EDLHAALS 131
            G      LHA L+
Sbjct: 117 FGAAPTAQLHATLA 130


>F0C4N4.1 F0C4N4_9XANT Transcriptional regulator
          Length = 142

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 7/120 (5%)

Query: 5   CTCTRLRRLTRRITSIYDRHLLPDALTISQYSLLSRVGRHGSIANLRLAAEMGMDRSTLS 64
           CTC  LRR  RR + +YDR L P  L++++YS+L R+    S+  L  A  +GMDR+TL+
Sbjct: 7   CTCFHLRRAARRTSQLYDRALAPVGLSLNEYSILRRLDAAQSLGAL--AHTLGMDRTTLT 64

Query: 65  RNIKPLMAAGWIATVDMPPDEQVDKRSFGLGLSEAGQAKLAAARPNWVAAQLEIDGLLGE 124
           RN+KPL+AAGWI T         D R   L LS +G+  L  A P+W AAQ +++ L G 
Sbjct: 65  RNLKPLLAAGWIKT-----QRGEDARQKWLVLSRSGRGLLVRAFPHWQAAQRQLETLFGS 119