BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0015.p (47 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1G889.1 B1G889_9BURK Type III effector Hrp-dependent protein 66 1e-09 A7IJG6.1 A7IJG6_XANP2 Type III effector Hrp-dependent outers 64 6e-09 >B1G889.1 B1G889_9BURK Type III effector Hrp-dependent protein Length = 470 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/41 (70%), Positives = 34/41 (82%) Query: 1 MSPGAPLCRAWSDNPRRDGLEVVLKGGQVGARSFFGDVLEG 41 + PGAPLCRAWS PRRDGL++VLKGGQ+G +FFG V EG Sbjct: 425 LVPGAPLCRAWSAEPRRDGLQIVLKGGQIGDATFFGMVREG 465 >A7IJG6.1 A7IJG6_XANP2 Type III effector Hrp-dependent outers Length = 474 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 3/50 (6%) Query: 1 MSPGAPLCRAWSDNPRRDGLEVVLKGGQVGARSFFGDVLEG---ASPVSA 47 ++PGAPLCRAWSD+P DGLEVVLKGGQ+G FF V +G A+PV A Sbjct: 418 LAPGAPLCRAWSDDPLYDGLEVVLKGGQMGPTDFFTTVRDGLAAAAPVRA 467