BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0014.p         (170 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q12HD1.1 Q12HD1_POLSJ Type III effector Hrp-dependent outers dom...   160   5e-38
B1G889.1 B1G889_9BURK Type III effector Hrp-dependent protein         153   1e-35
A7IJG6.1 A7IJG6_XANP2 Type III effector Hrp-dependent outers          149   2e-34
B8IBH5.1 B8IBH5_METNO Type III effector Hrp-dependent outers          132   2e-29
Q2CC28.1 Q2CC28_9RHOB Putative uncharacterized protein                110   5e-23

>Q12HD1.1 Q12HD1_POLSJ Type III effector Hrp-dependent outers domain protein
          Length = 457

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 98/128 (76%), Gaps = 2/128 (1%)

Query: 1   MDMVQLRDGAATDAQYLARLKGADTPVVMLDVLDEETLREAGRLVWEQRGAGVFSASSSG 60
           +DMVQLR G A  A  +  L GAD PVV+LDVLDEETL  AGRLVW QRG G+F+ASSSG
Sbjct: 186 IDMVQLRTGDA--AARVQALAGADVPVVLLDVLDEETLAAAGRLVWTQRGRGLFTASSSG 243

Query: 61  LQYALTSYWRSRGWIAEKTSLPKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLDL 120
           LQYAL ++WRS+G + E+ SLP A PVPVIA VSGSCSPVTA QIAWA+  GF  ERL+L
Sbjct: 244 LQYALAAHWRSQGLLPEQPSLPVAAPVPVIAVVSGSCSPVTAAQIAWAQGQGFQAERLNL 303

Query: 121 AAVLGADE 128
             +L A E
Sbjct: 304 PRLLDARE 311


>B1G889.1 B1G889_9BURK Type III effector Hrp-dependent protein
          Length = 470

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 90/120 (75%), Gaps = 2/120 (1%)

Query: 1   MDMVQLRDGAATDAQYLARLKGADTPVVMLDVLDEETLREAGRLVWEQRGAGVFSASSSG 60
           +DM++LR   A  A  +  L   D PVV++DVLDEETL EAGRLVWEQRG G+F+ASSSG
Sbjct: 198 IDMLELR--GADVATRVRALCAPDMPVVLIDVLDEETLAEAGRLVWEQRGEGIFTASSSG 255

Query: 61  LQYALTSYWRSRGWIAEKTSLPKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLDL 120
           LQYAL ++WR+RG +    SLP A PV  IAAVSGSCSPVTA QI WAR HGF  ERLDL
Sbjct: 256 LQYALAAHWRARGLLPPTPSLPAADPVQAIAAVSGSCSPVTAAQIGWARAHGFHTERLDL 315


>A7IJG6.1 A7IJG6_XANP2 Type III effector Hrp-dependent outers
          Length = 474

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 2/124 (1%)

Query: 1   MDMVQLRDGAATDAQYLARLKGADTPVVMLDVLDEETLREAGRLVWEQRGAGVFSASSSG 60
           +DM Q+R  AA   +  A L+G DTPVV++DV+DE+TL EAGRL+WE RG G+FSASSSG
Sbjct: 191 IDMAQIRADAADTRR--AMLEGDDTPVVLIDVMDEDTLTEAGRLIWENRGEGLFSASSSG 248

Query: 61  LQYALTSYWRSRGWIAEKTSLPKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLDL 120
           LQYAL ++WR  G +  +  LP A  VP IA VSGSCSPVTA QI WAR HGF  ERLDL
Sbjct: 249 LQYALAAHWRRLGLLPAQPGLPAAAGVPQIAVVSGSCSPVTAAQIGWARAHGFHTERLDL 308

Query: 121 AAVL 124
           +  L
Sbjct: 309 SRAL 312


>B8IBH5.1 B8IBH5_METNO Type III effector Hrp-dependent outers
          Length = 458

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 91/124 (73%), Gaps = 2/124 (1%)

Query: 1   MDMVQLRDGAATDAQYLARLKGADTPVVMLDVLDEETLREAGRLVWEQRGAGVFSASSSG 60
           +D V L+ GAA   +  A L G D PVV++DVLDEETL EAGRLVWE+RG GVFSASSSG
Sbjct: 187 IDFVALKSGAAPGRR--AALAGPDVPVVLIDVLDEETLAEAGRLVWEERGGGVFSASSSG 244

Query: 61  LQYALTSYWRSRGWIAEKTSLPKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLDL 120
           LQYAL ++WR++G I    SLP   P PV+AAVSGSCSP TA Q+A AR  GF  ERLDL
Sbjct: 245 LQYALAAHWRAQGLIPAIPSLPPLAPAPVVAAVSGSCSPGTAEQLARARAAGFLTERLDL 304

Query: 121 AAVL 124
           A  L
Sbjct: 305 ARAL 308


>Q2CC28.1 Q2CC28_9RHOB Putative uncharacterized protein
          Length = 454

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 13  DAQYLARLKGADTPVVMLDVLDEETLREAGRLVWEQRGAGVFSASSSGLQYALTSYWRSR 72
           DA  +    G    +V+LD  DE + R AGRLVWE RGAGVFSASSSGLQYAL ++WR+ 
Sbjct: 194 DAAEVLAASGESGEIVVLDTYDEASQRAAGRLVWEARGAGVFSASSSGLQYALVAHWRAE 253

Query: 73  GWIA-EKTSLPKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLDLAAVLG 125
           G +A E        P P + A+SGSCSPVTA QIA A   GFA  RLD+ AV G
Sbjct: 254 GALASEPPRFAPLAPTPRLLALSGSCSPVTADQIARAEAAGFAPFRLDVRAVAG 307