BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0194.p         (77 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IZ50.1 D8IZ50_HERSS ABC-type branched-chain amino acid transpo...   135   2e-30
A6GPE7.1 A6GPE7_9BURK ABC-type transporter, permease component        135   2e-30
Q46NH0.1 Q46NH0_CUPPJ Inner-membrane translocator                     130   7e-29
D8NUZ5.1 D8NUZ5_RALSO Putative Branched-chain amino acid transpo...   129   1e-28
D8NKQ6.1 D8NKQ6_RALSO Putative Branched-chain amino acid transpo...   129   1e-28

>D8IZ50.1 D8IZ50_HERSS ABC-type branched-chain amino acid transport system,
           permease component protein
          Length = 294

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/77 (93%), Positives = 75/77 (97%)

Query: 1   VIQVSPLMGSNLIIVVFAVVVIGGMGSILGSIVTGLGLGVIEGLTRVFYPELSATVVFII 60
           VIQVSPLMGSNLII VFAVVVIGGMGSILGSI+TGL LG+IEGLTRVFYPELSATVVFII
Sbjct: 218 VIQVSPLMGSNLIITVFAVVVIGGMGSILGSIITGLVLGLIEGLTRVFYPELSATVVFII 277

Query: 61  MAIVLMIRPAGLFGKEK 77
           MAIVLM+RPAGLFGKEK
Sbjct: 278 MAIVLMVRPAGLFGKEK 294


>A6GPE7.1 A6GPE7_9BURK ABC-type transporter, permease component
          Length = 294

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/77 (90%), Positives = 75/77 (97%)

Query: 1   VIQVSPLMGSNLIIVVFAVVVIGGMGSILGSIVTGLGLGVIEGLTRVFYPELSATVVFII 60
           VIQ+SPLMGSNLII VFAVVVIGGMGSILGSI+TGL LG++EGLTRVFYPELSATVVFII
Sbjct: 218 VIQISPLMGSNLIITVFAVVVIGGMGSILGSIITGLTLGIVEGLTRVFYPELSATVVFII 277

Query: 61  MAIVLMIRPAGLFGKEK 77
           MAIVLMIRPAGLFG+EK
Sbjct: 278 MAIVLMIRPAGLFGREK 294


>Q46NH0.1 Q46NH0_CUPPJ Inner-membrane translocator
          Length = 295

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 1   VIQVSPLMGSNLIIVVFAVVVIGGMGSILGSIVTGLGLGVIEGLTRVFYPELSATVVFII 60
           +IQVSPLMGSNLII VFAVVVIGGMGSI+GSIVTGLGLGVIEG TRVFYPELSATVVFI+
Sbjct: 219 IIQVSPLMGSNLIITVFAVVVIGGMGSIIGSIVTGLGLGVIEGFTRVFYPELSATVVFIL 278

Query: 61  MAIVLMIRPAGLFGKEK 77
           MA++L++RP+GLFGK+ 
Sbjct: 279 MAVILLVRPSGLFGKDN 295


>D8NUZ5.1 D8NUZ5_RALSO Putative Branched-chain amino acid transport system
           permease, membrane component (LivH)
          Length = 294

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 1   VIQVSPLMGSNLIIVVFAVVVIGGMGSILGSIVTGLGLGVIEGLTRVFYPELSATVVFII 60
           VIQ+SPLMG N+II VFAVVVIGGMGSILGSIVTGLGLGVIEGLT+VFYP+ S+TVVF+I
Sbjct: 218 VIQISPLMGQNMIITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVFYPQASSTVVFVI 277

Query: 61  MAIVLMIRPAGLFGKEK 77
           MA+VL++RPAGLFGKEK
Sbjct: 278 MALVLLVRPAGLFGKEK 294


>D8NKQ6.1 D8NKQ6_RALSO Putative Branched-chain amino acid transport system
           permease, membrane component (LivH)
          Length = 294

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 1   VIQVSPLMGSNLIIVVFAVVVIGGMGSILGSIVTGLGLGVIEGLTRVFYPELSATVVFII 60
           VIQ+SPLMG N+II VFAVVVIGGMGSILGSIVTGLGLGVIEGLT+VFYP+ S+TVVF+I
Sbjct: 218 VIQISPLMGQNMIITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVFYPQASSTVVFVI 277

Query: 61  MAIVLMIRPAGLFGKEK 77
           MA+VL++RPAGLFGKEK
Sbjct: 278 MALVLLVRPAGLFGKEK 294