BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0189.p (273 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5CYA3.1 C5CYA3_VARPS Periplasmic binding protein/LacI transcrip... 391 e-107 E6V2E9.1 E6V2E9_VARPD Periplasmic binding protein/LacI transcrip... 388 e-106 Q2SVU3.1 Q2SVU3_BURTA Ribose ABC transporter, periplasmic ribose... 378 e-103 B2JDH5.1 B2JDH5_BURP8 Periplasmic binding protein/LacI transcrip... 372 e-101 B2SY92.1 B2SY92_BURPP Periplasmic binding protein/LacI transcrip... 368 e-100 >C5CYA3.1 C5CYA3_VARPS Periplasmic binding protein/LacI transcriptional regulator Length = 306 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 190/252 (75%), Positives = 221/252 (87%) Query: 22 AASIGATLIVTDARHDIAKQTSDVEDLIQKKIDILLLNPTDSVGIQSAVKSAKKAGIVVV 81 AASIGAT++ TDARHD+AKQ DVED+IQKKIDILLLNPTDS G+QSAV+SAKKAG++VV Sbjct: 55 AASIGATVVTTDARHDVAKQIGDVEDMIQKKIDILLLNPTDSTGVQSAVRSAKKAGLIVV 114 Query: 82 TVDANAQGPVDSFVGSKNFDAGQAACTYLANTLKGKGDVAILDGIPVVPILERVRGCKAA 141 VDANAQGPVDSFVGSKN DAG+ AC YLA ++ KGDVAILDGIPVVPILERV+GC+ A Sbjct: 115 AVDANAQGPVDSFVGSKNTDAGRLACEYLAKSIGEKGDVAILDGIPVVPILERVKGCREA 174 Query: 142 FANFPGIKLVATQNGKQERDQALSVTENILQSHPKLQGMFSVNDIGALGALSAIESSGKD 201 A +PGIK+V+TQNGKQER AL+VTENILQ++ L+G+FSVND G++GAL+AIE+SGKD Sbjct: 175 LAKYPGIKVVSTQNGKQERATALTVTENILQANKDLKGIFSVNDGGSMGALAAIEASGKD 234 Query: 202 VKLVSVDGAPDAIKAILKSNAKFIATAAQYPRDQIRLALGVALAKKWGAATPAAVPVDIK 261 VKL SVDGAP+AIKA+ K +KFIAT AQYPRDQIRLA+G+ALAKKWGA PAAVPVD+K Sbjct: 235 VKLASVDGAPEAIKAMQKPGSKFIATTAQYPRDQIRLAIGIALAKKWGANVPAAVPVDVK 294 Query: 262 LIDKAQAAGFSW 273 LID A FSW Sbjct: 295 LIDAEGAKTFSW 306 >E6V2E9.1 E6V2E9_VARPD Periplasmic binding protein/LacI transcriptional regulator Length = 306 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/252 (74%), Positives = 221/252 (87%) Query: 22 AASIGATLIVTDARHDIAKQTSDVEDLIQKKIDILLLNPTDSVGIQSAVKSAKKAGIVVV 81 AASIGAT++ TDARHD+AKQ DVED+IQKK+DILLLNPTDS G+QSAV+SAKKAG+VVV Sbjct: 55 AASIGATVVTTDARHDVAKQIGDVEDMIQKKVDILLLNPTDSTGVQSAVRSAKKAGLVVV 114 Query: 82 TVDANAQGPVDSFVGSKNFDAGQAACTYLANTLKGKGDVAILDGIPVVPILERVRGCKAA 141 VDANAQGPVDSFVGSKN DAG+ AC YLA ++ KGDVAILDGIPVVPILERV+GC+ A Sbjct: 115 AVDANAQGPVDSFVGSKNTDAGRLACEYLAKSIGEKGDVAILDGIPVVPILERVKGCREA 174 Query: 142 FANFPGIKLVATQNGKQERDQALSVTENILQSHPKLQGMFSVNDIGALGALSAIESSGKD 201 A +PGIK+V+TQNGKQER AL+VTENILQ++ L+G+FSVND G++GAL+AI++SGKD Sbjct: 175 LAKYPGIKVVSTQNGKQERATALTVTENILQANKDLKGIFSVNDGGSMGALAAIDASGKD 234 Query: 202 VKLVSVDGAPDAIKAILKSNAKFIATAAQYPRDQIRLALGVALAKKWGAATPAAVPVDIK 261 VKL SVDGAP+AIKA+ K +KFIAT AQYPRDQIRLA+G+ALAKKWGA PAAVPVD+K Sbjct: 235 VKLASVDGAPEAIKAMQKPGSKFIATTAQYPRDQIRLAIGIALAKKWGANVPAAVPVDVK 294 Query: 262 LIDKAQAAGFSW 273 LID A F+W Sbjct: 295 LIDAEGAKTFTW 306 >Q2SVU3.1 Q2SVU3_BURTA Ribose ABC transporter, periplasmic ribose-binding protein Length = 316 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/252 (71%), Positives = 214/252 (84%) Query: 22 AASIGATLIVTDARHDIAKQTSDVEDLIQKKIDILLLNPTDSVGIQSAVKSAKKAGIVVV 81 AASIGA +IVTDA HD++KQ SDVED++QKKIDILL+NPTDS GIQSAV SAKKAG VV+ Sbjct: 65 AASIGAQVIVTDAHHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVVSAKKAGAVVI 124 Query: 82 TVDANAQGPVDSFVGSKNFDAGQAACTYLANTLKGKGDVAILDGIPVVPILERVRGCKAA 141 VDANA GPVD+FVGSKNFDAG +C YLA + G G+VAILDGIPVVPILERVRGC+AA Sbjct: 125 AVDANANGPVDAFVGSKNFDAGAMSCDYLAKAIGGSGEVAILDGIPVVPILERVRGCRAA 184 Query: 142 FANFPGIKLVATQNGKQERDQALSVTENILQSHPKLQGMFSVNDIGALGALSAIESSGKD 201 A FP +K+V QNGKQER AL+VTEN++Q+HP L+G+FSVND G++GALSAIE+SGKD Sbjct: 185 LAKFPNVKIVDVQNGKQERASALTVTENMIQAHPLLKGVFSVNDGGSMGALSAIEASGKD 244 Query: 202 VKLVSVDGAPDAIKAILKSNAKFIATAAQYPRDQIRLALGVALAKKWGAATPAAVPVDIK 261 +KL SVDGAP+AI A+ K N+K I T+AQ+PRDQIRLA+G+ LAKKWGA P A+PVD+K Sbjct: 245 IKLTSVDGAPEAIAAMQKPNSKLIETSAQFPRDQIRLAIGIGLAKKWGAHVPKAIPVDVK 304 Query: 262 LIDKAQAAGFSW 273 LID+ A FSW Sbjct: 305 LIDRGNAKTFSW 316 >B2JDH5.1 B2JDH5_BURP8 Periplasmic binding protein/LacI transcriptional regulator Length = 321 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/252 (75%), Positives = 219/252 (86%) Query: 22 AASIGATLIVTDARHDIAKQTSDVEDLIQKKIDILLLNPTDSVGIQSAVKSAKKAGIVVV 81 AASIGAT++VTDA HD++KQ SDVED++QKKIDILL+NPTDS GIQSAV SAKKAG VVV Sbjct: 70 AASIGATVVVTDAHHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVTSAKKAGAVVV 129 Query: 82 TVDANAQGPVDSFVGSKNFDAGQAACTYLANTLKGKGDVAILDGIPVVPILERVRGCKAA 141 VDANA GPVDSFVGSKNFDAGQ +C YLA + G G+VAILDGIPVVPILERVRGCKAA Sbjct: 130 AVDANANGPVDSFVGSKNFDAGQMSCEYLAKAIGGSGEVAILDGIPVVPILERVRGCKAA 189 Query: 142 FANFPGIKLVATQNGKQERDQALSVTENILQSHPKLQGMFSVNDIGALGALSAIESSGKD 201 A FP +K+V TQNGKQER ALSVTEN++Q+HP L+G+FSVND G++GALSAIESSGKD Sbjct: 190 LAKFPNVKVVDTQNGKQERATALSVTENMIQAHPNLKGIFSVNDGGSMGALSAIESSGKD 249 Query: 202 VKLVSVDGAPDAIKAILKSNAKFIATAAQYPRDQIRLALGVALAKKWGAATPAAVPVDIK 261 +KL SVDGAP+AI AI K N+KFI T+AQ+PRDQIRLA+GVALAKKWGA P +PVD+K Sbjct: 250 IKLTSVDGAPEAITAIQKPNSKFIETSAQFPRDQIRLAIGVALAKKWGANVPKTIPVDVK 309 Query: 262 LIDKAQAAGFSW 273 L+DK A GFSW Sbjct: 310 LVDKDNAKGFSW 321 >B2SY92.1 B2SY92_BURPP Periplasmic binding protein/LacI transcriptional regulator Length = 317 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/252 (74%), Positives = 221/252 (87%) Query: 22 AASIGATLIVTDARHDIAKQTSDVEDLIQKKIDILLLNPTDSVGIQSAVKSAKKAGIVVV 81 AASIGAT++VTDA HD++KQ SDVED++QKKIDILL+NPTDS GIQSAV SAKKAG+VVV Sbjct: 66 AASIGATVVVTDAHHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVTSAKKAGVVVV 125 Query: 82 TVDANAQGPVDSFVGSKNFDAGQAACTYLANTLKGKGDVAILDGIPVVPILERVRGCKAA 141 VDANA GPVDSFVGSKN+DAG+ AC YLA ++ G G+VAILDGIPVVPILERVRGCKAA Sbjct: 126 AVDANANGPVDSFVGSKNYDAGEMACEYLAKSIGGSGEVAILDGIPVVPILERVRGCKAA 185 Query: 142 FANFPGIKLVATQNGKQERDQALSVTENILQSHPKLQGMFSVNDIGALGALSAIESSGKD 201 A PG+KLV TQNGKQER ALSVTEN++Q+HP L+G+FSVND G++GALSAIESSGKD Sbjct: 186 LAKAPGVKLVDTQNGKQERATALSVTENMIQAHPNLKGVFSVNDGGSMGALSAIESSGKD 245 Query: 202 VKLVSVDGAPDAIKAILKSNAKFIATAAQYPRDQIRLALGVALAKKWGAATPAAVPVDIK 261 +KL SVDGAP+AI AI K N+KF+ T+AQ+P DQ+R+ALG+ALAKKWGA P +PVD+K Sbjct: 246 IKLTSVDGAPEAIAAIQKPNSKFVETSAQFPADQVRIALGIALAKKWGANVPKTIPVDVK 305 Query: 262 LIDKAQAAGFSW 273 +IDK+ A GFSW Sbjct: 306 MIDKSNAKGFSW 317