BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0182.p         (161 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T482.1 MNMG_JANMA tRNA uridine 5-carboxymethylaminomethyl modi...   293   4e-78
D8IZ47.1 D8IZ47_HERSS tRNA uridine 5-carboxymethylaminomethyl mo...   293   5e-78
A4GAI2.2 MNMG_HERAR tRNA uridine 5-carboxymethylaminomethyl modi...   289   8e-77
F1VTT1.1 F1VTT1_9BURK tRNA uridine 5-carboxymethylaminomethyl mo...   286   6e-76
Q13SP0.1 MNMG_BURXL tRNA uridine 5-carboxymethylaminomethyl modi...   283   7e-75

>A6T482.1 MNMG_JANMA tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG
          Length = 645

 Score =  293 bits (751), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/162 (89%), Positives = 150/162 (92%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ+TLLL+HNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQSTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDL+VEGDRVIGAVTQ GIKF 
Sbjct: 88  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLLVEGDRVIGAVTQVGIKFY 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIHVGLNNYSAGRA   PA    +R + 
Sbjct: 148 ARAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAISLSARLKE 189


>D8IZ47.1 D8IZ47_HERSS tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG
          Length = 642

 Score =  293 bits (750), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/162 (89%), Positives = 150/162 (92%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ TLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYK AIRSRLENQPNLWLFQQAVDDLM+EGDRV+GAVTQAGI+FA
Sbjct: 88  KGPAVRATRAQADRILYKAAIRSRLENQPNLWLFQQAVDDLMLEGDRVVGAVTQAGIRFA 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
           GRAVVLTAGTFLDGKIHVGLNNYS GRA   PA    +R + 
Sbjct: 148 GRAVVLTAGTFLDGKIHVGLNNYSGGRAGDPPAVSLSARLKE 189


>A4GAI2.2 MNMG_HERAR tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG
          Length = 645

 Score =  289 bits (740), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 141/162 (87%), Positives = 150/162 (92%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ+TLLLTHNIETLGQMSCNPSIGGIGKGHLV+EVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQSTLLLTHNIETLGQMSCNPSIGGIGKGHLVREVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQ VDDL+VEGDRV+GAVTQAGI+F 
Sbjct: 88  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQGVDDLLVEGDRVVGAVTQAGIQFR 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIH+G+NNYSAGRA   PA    +R + 
Sbjct: 148 ARAVVLTAGTFLDGKIHIGMNNYSAGRAGDPPAISLSARLKE 189


>F1VTT1.1 F1VTT1_9BURK tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme GidA
          Length = 644

 Score =  286 bits (732), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 140/162 (86%), Positives = 149/162 (91%), Gaps = 2/162 (1%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MGQ TLLL+HNIETLGQMSCNPSIGGIGKGHLV+EVDAMGGAMAIATDEAGIQFRILNSS
Sbjct: 28  MGQKTLLLSHNIETLGQMSCNPSIGGIGKGHLVREVDAMGGAMAIATDEAGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADR+LYKQAIR+RLENQPNLWLFQQAVDDL+VEGDRV+GAVTQ GI+F 
Sbjct: 88  KGPAVRATRAQADRLLYKQAIRTRLENQPNLWLFQQAVDDLIVEGDRVVGAVTQIGIQFR 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA--XPATRRRSRCRH 160
            RAVVLTAGTFLDGKIHVGLNNYSAGRA   PA    +R + 
Sbjct: 148 SRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPAVTLSARLKE 189


>Q13SP0.1 MNMG_BURXL tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG
          Length = 652

 Score =  283 bits (724), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 136/148 (91%), Positives = 141/148 (95%)

Query: 1   MGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAIATDEAGIQFRILNSS 60
           MG TTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDA+GGAMA ATDE GIQFRILNSS
Sbjct: 28  MGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQFRILNSS 87

Query: 61  KGPAVRATRAQADRILYKQAIRSRLENQPNLWLFQQAVDDLMVEGDRVIGAVTQAGIKFA 120
           KGPAVRATRAQADR+LYKQAIR RLENQPNLWLFQQAVDDLMVEGDRV+GAVTQ GI+F 
Sbjct: 88  KGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFR 147

Query: 121 GRAVVLTAGTFLDGKIHVGLNNYSAGRA 148
           GRAVVLTAGTFLDGKIHVGLNNY+ GRA
Sbjct: 148 GRAVVLTAGTFLDGKIHVGLNNYTGGRA 175