BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0180.p (222 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6T481.1 RSMG_JANMA Ribosomal RNA small subunit methyltransferas... 305 4e-81 A4GAI1.1 RSMG_HERAR Ribosomal RNA small subunit methyltransferas... 302 3e-80 F1VTT2.1 F1VTT2_9BURK Ribosomal RNA small subunit methyltransfer... 292 2e-77 D8NV09.1 D8NV09_RALSO Ribosomal RNA small subunit methyltransfer... 246 2e-63 B5SL78.1 B5SL78_RALSO Ribosomal RNA small subunit methyltransfer... 245 3e-63 >A6T481.1 RSMG_JANMA Ribosomal RNA small subunit methyltransferase G EC=2.1.1.170 Length = 220 Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 148/206 (71%), Positives = 167/206 (81%) Query: 17 LTAGAEALGLTLSAGQHKKLLAYLTLMAKWNRTYNLTALRDPAQMMTHHLLDSLAAVPAF 76 L GA L L LS Q KL+ YL LMAKWN YNLTA+RDP QM+T HLLDSLAAV AF Sbjct: 13 LVQGARDLSLNLSEAQITKLIDYLALMAKWNSVYNLTAVRDPVQMVTQHLLDSLAAVSAF 72 Query: 77 AQADNVLDVGAGGGLPGIVLAIWAAEARPGMKVSMVDTVHKKTAFLTQAKAELQLSNVSV 136 + A NVLDVGAGGGLPGIVLAIWAAEA P M++SM+DTVHKKTAFLTQ KAEL LSNVSV Sbjct: 73 SNAKNVLDVGAGGGLPGIVLAIWAAEAHPEMRISMIDTVHKKTAFLTQVKAELNLSNVSV 132 Query: 137 HTARVEQLQVGQLFDVITSRAFAELNDFINWSNHLLQPGGRYIAMKGVMPQEEIARLPDG 196 +TARVEQ Q Q FDVITSRAFA+L+DF+NWS HLL GG+YIA+KGV P E+A LP G Sbjct: 133 YTARVEQWQAPQKFDVITSRAFADLSDFVNWSEHLLADGGQYIALKGVAPDTEVAGLPAG 192 Query: 197 WKVEKTQALQVPGLDAERHLIFIERS 222 W+V + +ALQVP L AERHL+FIER+ Sbjct: 193 WQVREVRALQVPTLQAERHLVFIERT 218 >A4GAI1.1 RSMG_HERAR Ribosomal RNA small subunit methyltransferase G EC=2.1.1.170 Length = 218 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 150/209 (71%), Positives = 163/209 (77%) Query: 13 LADTLTAGAEALGLTLSAGQHKKLLAYLTLMAKWNRTYNLTALRDPAQMMTHHLLDSLAA 72 L L GA L LTLS Q KL+ YL LM KWN YNLTA+RDP QM+T HLLDSLAA Sbjct: 9 LTAILVEGARGLSLTLSEAQITKLIDYLALMVKWNSVYNLTAVRDPLQMVTQHLLDSLAA 68 Query: 73 VPAFAQADNVLDVGAGGGLPGIVLAIWAAEARPGMKVSMVDTVHKKTAFLTQAKAELQLS 132 V AFA A NVLDVGAGGGLPGIVLAIWAAEA P M+VS++DTVHKKTAFLTQ KAEL L+ Sbjct: 69 VSAFAGAKNVLDVGAGGGLPGIVLAIWAAEAEPEMRVSLIDTVHKKTAFLTQVKAELGLA 128 Query: 133 NVSVHTARVEQLQVGQLFDVITSRAFAELNDFINWSNHLLQPGGRYIAMKGVMPQEEIAR 192 NVSVHTARVEQ FDVITSRAFAELNDF+NWS HLL GG +IA+KGV P E+A Sbjct: 129 NVSVHTARVEQWNAPHKFDVITSRAFAELNDFVNWSGHLLDEGGEFIALKGVAPDTEVAH 188 Query: 193 LPDGWKVEKTQALQVPGLDAERHLIFIER 221 LP GWKV + + LQVP L AERHLIFIER Sbjct: 189 LPAGWKVREVRPLQVPTLQAERHLIFIER 217 >F1VTT2.1 F1VTT2_9BURK Ribosomal RNA small subunit methyltransferase G Length = 221 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 142/218 (65%), Positives = 169/218 (77%) Query: 5 TTTTTDLQLADTLTAGAEALGLTLSAGQHKKLLAYLTLMAKWNRTYNLTALRDPAQMMTH 64 T T L+L L GA +L L L ++L+ Y+ L+AKWN YNLTA+RDP QM+T Sbjct: 2 TNTFNRLELTQLLRDGATSLDLFLEPATLERLIDYVALLAKWNTVYNLTAIRDPQQMVTQ 61 Query: 65 HLLDSLAAVPAFAQADNVLDVGAGGGLPGIVLAIWAAEARPGMKVSMVDTVHKKTAFLTQ 124 HLLD+LA +PAF +VLDVGAGGGLPG+VLAIWA +A P +++SMVDTVHKKTAFLTQ Sbjct: 62 HLLDTLAILPAFLHVKHVLDVGAGGGLPGMVLAIWAQQANPALRISMVDTVHKKTAFLTQ 121 Query: 125 AKAELQLSNVSVHTARVEQLQVGQLFDVITSRAFAELNDFINWSNHLLQPGGRYIAMKGV 184 K EL L+NV+VHT RVE L+V QLFDVITSRAFAEL DF+NWS HLL GR+IAMKG Sbjct: 122 VKVELGLTNVTVHTGRVEALKVTQLFDVITSRAFAELLDFVNWSGHLLAEDGRFIAMKGQ 181 Query: 185 MPQEEIARLPDGWKVEKTQALQVPGLDAERHLIFIERS 222 +P +EIARLP GWKV + + LQVPGL+AERHLIFIER Sbjct: 182 LPVDEIARLPAGWKVAEIRPLQVPGLNAERHLIFIERD 219 >D8NV09.1 D8NV09_RALSO Ribosomal RNA small subunit methyltransferase G 5 EC=2.1.1.170 Length = 223 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/221 (60%), Positives = 152/221 (68%), Gaps = 15/221 (6%) Query: 13 LADT---LTAGAEALGLTLSAGQHKKLLAYLTLMAKWNRTYNLTALRDPAQMMTHHLLDS 69 LADT L AGA ALGL L A Q +LLAY L+AKWNR YNLTA+RD M+THHLLDS Sbjct: 6 LADTRSELDAGARALGLPLDAAQLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDS 65 Query: 70 LAAVPAFA--------QADNVLDVGAGGGLPGIVLAIWAAEARPGMKVSMVDTVHKKTAF 121 LAAVP A +A VLDVG+GGGLPGI LAI A P + V+MVD V KKTAF Sbjct: 66 LAAVPRIAGLVRRVQPEAPRVLDVGSGGGLPGIPLAI----ACPDIGVTMVDIVQKKTAF 121 Query: 122 LTQAKAELQLSNVSVHTARVEQLQVGQLFDVITSRAFAELNDFINWSNHLLQPGGRYIAM 181 LTQ +AEL L+N H VE+L + VITSRAFAELNDF+ + HLL PGGR +AM Sbjct: 122 LTQCRAELGLANAQSHWGHVEKLADATGYGVITSRAFAELNDFVRLAGHLLAPGGRMVAM 181 Query: 182 KGVMPQEEIARLPDGWKVEKTQALQVPGLDAERHLIFIERS 222 KGV P EIARLP+GW VE + L VPGL AERHL+ + S Sbjct: 182 KGVRPDAEIARLPEGWTVESIERLTVPGLPAERHLVILAPS 222 >B5SL78.1 B5SL78_RALSO Ribosomal RNA small subunit methyltransferase G EC=2.1.1.170 Length = 225 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 134/226 (59%), Positives = 151/226 (66%), Gaps = 15/226 (6%) Query: 8 TTDLQLADT---LTAGAEALGLTLSAGQHKKLLAYLTLMAKWNRTYNLTALRDPAQMMTH 64 T LAD L AGA ALGL+L A Q +LLAY L+ KWNR YNLTA+RD M+TH Sbjct: 3 NTHAALADARSELDAGARALGLSLDAAQLDRLLAYQALLGKWNRVYNLTAIRDAGDMLTH 62 Query: 65 HLLDSLAAVPAFAQ--------ADNVLDVGAGGGLPGIVLAIWAAEARPGMKVSMVDTVH 116 HLLDSLAAVP A+ A VLDVG+GGGLPGI LAI A P + V+MVD V Sbjct: 63 HLLDSLAAVPRIAERVRRAQPEAPRVLDVGSGGGLPGIPLAI----ACPDIGVTMVDIVQ 118 Query: 117 KKTAFLTQAKAELQLSNVSVHTARVEQLQVGQLFDVITSRAFAELNDFINWSNHLLQPGG 176 KKTAFLTQ +AEL L N H VE+L + VITSRAFAELNDF+ + HLL PGG Sbjct: 119 KKTAFLTQCRAELGLGNAQSHWGHVEKLADATGYGVITSRAFAELNDFVRLAGHLLAPGG 178 Query: 177 RYIAMKGVMPQEEIARLPDGWKVEKTQALQVPGLDAERHLIFIERS 222 R +AMKGV P EIARLPDGW VE + L VPGL AERHLI + S Sbjct: 179 RMVAMKGVHPAGEIARLPDGWAVESIERLTVPGLSAERHLIILAPS 224