BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0167.p (513 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IY00.1 D8IY00_HERSS Methyl-accepting chemotaxis transducer tra... 602 e-170 Q3SIF5.1 Q3SIF5_THIDA Chemotaxis sensory transducer 543 e-152 C5CXU6.1 C5CXU6_VARPS Methyl-accepting chemotaxis sensory transd... 541 e-151 A6SU26.1 A6SU26_JANMA Methyl-accepting chemotaxis protein 530 e-148 A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer tra... 526 e-147 >D8IY00.1 D8IY00_HERSS Methyl-accepting chemotaxis transducer transmembrane protein Length = 533 Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust. Identities = 327/512 (63%), Positives = 397/512 (77%) Query: 1 MKNLKIGTRLGIGFVVILMLMVVMLGISVWRLHQINSAVVAITSDSVTNERNAVEWLAVI 60 MKNLKIG RL IGF+ +LMLM VM+ + VWRL I A +T ++ ER+AV+W A I Sbjct: 1 MKNLKIGVRLAIGFIALLMLMAVMVALGVWRLGSIGDATDDMTRIALKKERDAVQWHAAI 60 Query: 61 RESGIRTLAVIKTEDPDAQQYFTAQIAAESARIAPMRKKIEEVNTSPQEVAQLAEINKVR 120 +E+G+RT AV+K++D Q YF QI A+SARI+ ++K++E T +E E+ K+R Sbjct: 61 KENGVRTFAVMKSDDDAFQAYFQKQIDAQSARISQLQKEVEAAITDAEEKRLFDEVGKLR 120 Query: 121 DTYQAVRNDVFKLKKTGNMDEVKKMTAEKFMPLYASYTEAVAKFRDMQRQEITTSAAAIA 180 Y+A R +F +K G+ ++MT + + Y + V ++ D Q+Q I +AAAI Sbjct: 121 AAYRATRQSIFDVKTAGDDARAREMTDTTLVKMMDDYADGVLRYADFQKQVIDQTAAAIN 180 Query: 181 NDYSSSRNMLLILGIVELVLGGTLAWLLTISITRPLTQAVGIAETVAAGDLSSDIVAGGK 240 DY S R+MLL LG +E+VLG LAWLLT SITRPL QAV IAETVAAGDL+S I + + Sbjct: 181 RDYRSGRSMLLALGAIEIVLGAALAWLLTRSITRPLNQAVTIAETVAAGDLTSRIDSSSR 240 Query: 241 DETGQLLTALKTMNDNLLNIVSQVRVGTDTISTASSEIASGNLDLSSRTEQQAGSLEETA 300 DETG+LL ALKTMN NLL+IV +VR+GT+TI+TAS EIA+GNLDLS+RTE QAGSLEETA Sbjct: 241 DETGKLLAALKTMNGNLLDIVGRVRMGTETINTASREIATGNLDLSARTEAQAGSLEETA 300 Query: 301 SAMEELTSTVKQNADNARQANQLAVSASEVAIQGGAVVSQVVDTMGSINESSRKIVDIIS 360 SAME+LTSTVKQNADNARQAN+LA SAS+VA QGGAVV QVV TMG+I+ SS+KI DII Sbjct: 301 SAMEQLTSTVKQNADNARQANELAASASQVATQGGAVVDQVVATMGAIHASSQKIADIIG 360 Query: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSAAAKEIKTLIDDSVS 420 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRS++AAKEIK LIDDSV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIDDSVE 420 Query: 421 KVDVGSKLVQQAGATMDEVVASVKRVTDIVGEISSASQEQSAGIGEVGQAITQMDESTQQ 480 KVD GS+LV +AG TM EVV SV RVT +V EI+ ASQEQS GI +V AIT +DE+TQQ Sbjct: 421 KVDDGSRLVARAGDTMQEVVQSVARVTAVVREITLASQEQSDGIEQVNLAITHIDETTQQ 480 Query: 481 NAALVEQAAAAAQSLQDQAGRLAKVVSVFKLD 512 NAALVEQAAAAA+S+QDQA L VSVF+L+ Sbjct: 481 NAALVEQAAAAARSMQDQAASLTDAVSVFRLE 512 >Q3SIF5.1 Q3SIF5_THIDA Chemotaxis sensory transducer Length = 559 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 313/508 (61%), Positives = 382/508 (75%) Query: 4 LKIGTRLGIGFVVILMLMVVMLGISVWRLHQINSAVVAITSDSVTNERNAVEWLAVIRES 63 +KIG RLG+GF +L+L+VV+ I VWRL + ++ + + R EW ++I + Sbjct: 1 MKIGARLGLGFASVLLLLVVVAVIGVWRLQTVGMMTDSLVKNEMHKARIINEWESIINAN 60 Query: 64 GIRTLAVIKTEDPDAQQYFTAQIAAESARIAPMRKKIEEVNTSPQEVAQLAEINKVRDTY 123 +R LA KT +P+ +++F AA S ++K++E + T + A A I R Y Sbjct: 61 AVRALAAAKTNNPETEKFFVDASAAASKGGIALQKQLESLLTDAESRALFAAIADKRSAY 120 Query: 124 QAVRNDVFKLKKTGNMDEVKKMTAEKFMPLYASYTEAVAKFRDMQRQEITTSAAAIANDY 183 A R+ K K GN+ KK E P +Y E++ Q+Q I +A I Y Sbjct: 121 LAARDAALKEKAAGNVLGAKKFVDEDMKPRLDAYLESLHDLARYQKQAIDATAGNIHRQY 180 Query: 184 SSSRNMLLILGIVELVLGGTLAWLLTISITRPLTQAVGIAETVAAGDLSSDIVAGGKDET 243 S R +L+ L IV L++G A+ +T SITRP+ QAV +A+TVAAGDL+S I GKDET Sbjct: 181 ESGRMLLIGLSIVALMMGIGFAFWITRSITRPMNQAVKVAQTVAAGDLTSRIEVEGKDET 240 Query: 244 GQLLTALKTMNDNLLNIVSQVRVGTDTISTASSEIASGNLDLSSRTEQQAGSLEETASAM 303 G+LL ALK MND+L+ IV QVR+GTD I+TASSEIA+GNLDLSSRTE+QA SLEETAS+M Sbjct: 241 GRLLQALKDMNDSLVKIVGQVRLGTDAIATASSEIATGNLDLSSRTEEQASSLEETASSM 300 Query: 304 EELTSTVKQNADNARQANQLAVSASEVAIQGGAVVSQVVDTMGSINESSRKIVDIISVID 363 E+LTSTVKQNAD+ARQANQ+AVSASEVA++GGAVV+QVVDTMGSINESSRKIVDII+VID Sbjct: 301 EQLTSTVKQNADHARQANQMAVSASEVAVKGGAVVAQVVDTMGSINESSRKIVDIIAVID 360 Query: 364 GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSAAAKEIKTLIDDSVSKVD 423 GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRS+ AAKEIKTLI DSV K D Sbjct: 361 GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKTLIGDSVEKAD 420 Query: 424 VGSKLVQQAGATMDEVVASVKRVTDIVGEISSASQEQSAGIGEVGQAITQMDESTQQNAA 483 +GSKLV QAGATMDE+VASVKRVTDI+GEI++ASQEQSAGI +V QAI QMDE TQQNAA Sbjct: 421 IGSKLVGQAGATMDEIVASVKRVTDIMGEITAASQEQSAGIEQVNQAIAQMDEVTQQNAA 480 Query: 484 LVEQAAAAAQSLQDQAGRLAKVVSVFKL 511 LVE+AAAAA S+QDQA LA+ VSVF+L Sbjct: 481 LVEEAAAAASSMQDQAANLAEAVSVFRL 508 >C5CXU6.1 C5CXU6_VARPS Methyl-accepting chemotaxis sensory transducer Length = 559 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 307/512 (59%), Positives = 379/512 (74%) Query: 1 MKNLKIGTRLGIGFVVILMLMVVMLGISVWRLHQINSAVVAITSDSVTNERNAVEWLAVI 60 MKNLKIGTRLGIGF ++L LM + GI V+RL + AV + S+ ER A WL Sbjct: 1 MKNLKIGTRLGIGFALVLALMACIAGIGVFRLQGVGDAVQEMVQRSLVKERLAANWLLNT 60 Query: 61 RESGIRTLAVIKTEDPDAQQYFTAQIAAESARIAPMRKKIEEVNTSPQEVAQLAEINKVR 120 + +RT A++K+ D + Q Y Q++ SA I+ + K+E + SP+E A A+I + R Sbjct: 61 SSNSVRTFALVKSNDAEVQDYLQKQMSKTSAGISETQAKLEAMLDSPEEQAISADIKEKR 120 Query: 121 DTYQAVRNDVFKLKKTGNMDEVKKMTAEKFMPLYASYTEAVAKFRDMQRQEITTSAAAIA 180 Y +RN + KLK G +E +T K +P+ Y ++ Q + I +A A+ Sbjct: 121 SQYVGLRNTILKLKAEGKQEEAAALTNGKLVPMLEVYDASIRGMLTHQAERIDKAADAVD 180 Query: 181 NDYSSSRNMLLILGIVELVLGGTLAWLLTISITRPLTQAVGIAETVAAGDLSSDIVAGGK 240 + + R +++L + L+LGG LAWLLT SITRPL +AV +A+TVA GDL+S I + + Sbjct: 181 SLNRAGRMNVIVLAMAALLLGGVLAWLLTRSITRPLNEAVRVAQTVADGDLTSRIESSSR 240 Query: 241 DETGQLLTALKTMNDNLLNIVSQVRVGTDTISTASSEIASGNLDLSSRTEQQAGSLEETA 300 DETGQL+ ALK MN +L +VS VR GTD I+TAS EIA+GN DLSSRTE+QA SLE+TA Sbjct: 241 DETGQLMLALKNMNASLATVVSGVRQGTDAIATASGEIAAGNQDLSSRTEEQASSLEQTA 300 Query: 301 SAMEELTSTVKQNADNARQANQLAVSASEVAIQGGAVVSQVVDTMGSINESSRKIVDIIS 360 ++MEELTSTVKQNADNARQANQLA+SASEVA++GG VV QVVDTM SIN SS+KIVDII Sbjct: 301 ASMEELTSTVKQNADNARQANQLALSASEVAVKGGNVVGQVVDTMASINASSKKIVDIIG 360 Query: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSAAAKEIKTLIDDSVS 420 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRS AAAKEIK LIDDSV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGAAAKEIKGLIDDSVG 420 Query: 421 KVDVGSKLVQQAGATMDEVVASVKRVTDIVGEISSASQEQSAGIGEVGQAITQMDESTQQ 480 KVD+GS LV +AG TM E+V SVKRVTDI+GEI++ASQEQS GI +V QAI QMD+ TQQ Sbjct: 421 KVDMGSALVGEAGKTMAEIVGSVKRVTDIIGEITAASQEQSTGIEQVNQAIAQMDQVTQQ 480 Query: 481 NAALVEQAAAAAQSLQDQAGRLAKVVSVFKLD 512 NAALVE+AAAAAQS+Q+QA L VSVF+LD Sbjct: 481 NAALVEEAAAAAQSMQEQAASLVGAVSVFRLD 512 >A6SU26.1 A6SU26_JANMA Methyl-accepting chemotaxis protein Length = 566 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 297/513 (57%), Positives = 376/513 (73%), Gaps = 2/513 (0%) Query: 1 MKNLKIGTRLGIGFVVILMLMVVMLGISVWRLHQINSAVVAITSDSVTNERNAVEWLAVI 60 N+KIG RL +GF V+L L + + + +LH +++ ++ + ER +W A+ Sbjct: 4 FSNMKIGARLMLGFGVVLALSIAIAADGIRQLHAVSAITRSMLELPIAKERMVSDWAAIT 63 Query: 61 RESGIRTLAVIKTEDPDAQQYFTAQIAAESARIA-PMRKKIEEVNTSPQEVAQLAEINKV 119 + S RT+ V K+ DP Q F+A+ AA+ ++ + + +K+E + + QE A+I V Sbjct: 64 KASIARTIGVAKSADPALAQ-FSAKFAADDSKQSMEIIQKLEPLLNTDQEKELYAKILDV 122 Query: 120 RDTYQAVRNDVFKLKKTGNMDEVKKMTAEKFMPLYASYTEAVAKFRDMQRQEITTSAAAI 179 R ++ A R V KLK G E K F+P S+ +F +++R+++ A + Sbjct: 123 RKSFLAGREGVMKLKTEGKEAEAAKYFDTTFLPAADSFKNHFTEFVELERKQMDAGTAQL 182 Query: 180 ANDYSSSRNMLLILGIVELVLGGTLAWLLTISITRPLTQAVGIAETVAAGDLSSDIVAGG 239 ++ ++S L++L + L G AW LTI ITRPL AV A VA GDL++DI A Sbjct: 183 SDVEAASTRQLMLLSAMVLAFGIFCAWRLTIGITRPLKTAVDAARRVAGGDLTNDIKAES 242 Query: 240 KDETGQLLTALKTMNDNLLNIVSQVRVGTDTISTASSEIASGNLDLSSRTEQQAGSLEET 299 KDE GQLL ALK MND L IV +VR+GT+TI+TAS+EIA+GNLDLSSRTEQQA SLEET Sbjct: 243 KDECGQLLAALKDMNDGLQRIVGEVRLGTETITTASNEIAAGNLDLSSRTEQQASSLEET 302 Query: 300 ASAMEELTSTVKQNADNARQANQLAVSASEVAIQGGAVVSQVVDTMGSINESSRKIVDII 359 AS+MEELTSTVKQNADNARQANQLAVSASEVA++GG VVSQVV TM SINESSRKIVDII Sbjct: 303 ASSMEELTSTVKQNADNARQANQLAVSASEVALKGGDVVSQVVQTMSSINESSRKIVDII 362 Query: 360 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSAAAKEIKTLIDDSV 419 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRS++AAKEIK LI DSV Sbjct: 363 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSASAAKEIKALIGDSV 422 Query: 420 SKVDVGSKLVQQAGATMDEVVASVKRVTDIVGEISSASQEQSAGIGEVGQAITQMDESTQ 479 KVD G+KLV +AGATMDE+V S++RVTDI+GEI++ASQEQSAGI ++ QAI QMD TQ Sbjct: 423 GKVDTGNKLVAEAGATMDEIVNSIRRVTDIMGEITAASQEQSAGIEQINQAIGQMDHVTQ 482 Query: 480 QNAALVEQAAAAAQSLQDQAGRLAKVVSVFKLD 512 QNA+LVE+AAAAA+S+QDQA +L +VV FKLD Sbjct: 483 QNASLVEEAAAAAESMQDQARKLGQVVGAFKLD 515 >A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer transmembrane protein Length = 568 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 294/510 (57%), Positives = 378/510 (74%) Query: 3 NLKIGTRLGIGFVVILMLMVVMLGISVWRLHQINSAVVAITSDSVTNERNAVEWLAVIRE 62 NLKI TRL GF ++L LMV+M + + RL ++ ++ +T + ER A EWL+ + Sbjct: 5 NLKISTRLSFGFALLLTLMVMMTVVGILRLQEVGTSADVMTQTMLPKERLAQEWLSAVDV 64 Query: 63 SGIRTLAVIKTEDPDAQQYFTAQIAAESARIAPMRKKIEEVNTSPQEVAQLAEINKVRDT 122 +G RTLA KT + Q +F Q+ S R ++K+IE + +P++ E+ R+ Sbjct: 65 NGARTLASAKTTSAEDQAFFQKQMDKTSVRANELQKEIESMIKTPEDKRLFEELVVARNA 124 Query: 123 YQAVRNDVFKLKKTGNMDEVKKMTAEKFMPLYASYTEAVAKFRDMQRQEITTSAAAIAND 182 Y+ +R VFKLK G + E + + EK +P +Y+ ++ +++ I + +I + Sbjct: 125 YRDIRQTVFKLKAEGKLPEAQLLINEKMLPAMNAYSNSIDAVLQNEKKLIDEAGTSIQSA 184 Query: 183 YSSSRNMLLILGIVELVLGGTLAWLLTISITRPLTQAVGIAETVAAGDLSSDIVAGGKDE 242 + S R++L+ L + LG AW L ISITRPL +AV +A TVA+GDLS+ I DE Sbjct: 185 FLSGRSLLIGLLAAAVALGVFFAWRLAISITRPLNRAVTVARTVASGDLSAKIEVSSNDE 244 Query: 243 TGQLLTALKTMNDNLLNIVSQVRVGTDTISTASSEIASGNLDLSSRTEQQAGSLEETASA 302 TGQL+ ALK M +L VS+VR GT+TI+TAS +IASGNLDLSSRTE+QA SL ETA++ Sbjct: 245 TGQLMQALKDMTQSLNKTVSEVRSGTETIATASRQIASGNLDLSSRTEEQASSLGETAAS 304 Query: 303 MEELTSTVKQNADNARQANQLAVSASEVAIQGGAVVSQVVDTMGSINESSRKIVDIISVI 362 M +LTSTV+QNADNARQAN LA+SAS+VA++GG+VVS+VVDTM SINES+RKIVDIISVI Sbjct: 305 MGQLTSTVRQNADNARQANSLAMSASDVAVKGGSVVSEVVDTMASINESARKIVDIISVI 364 Query: 363 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSAAAKEIKTLIDDSVSKV 422 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRS+AAAKEIK LI DSV KV Sbjct: 365 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKILIGDSVGKV 424 Query: 423 DVGSKLVQQAGATMDEVVASVKRVTDIVGEISSASQEQSAGIGEVGQAITQMDESTQQNA 482 + GSKLV +AG+TM+E+V SVKRVTDI+ EI +ASQEQS+GI +V QAI QMD+ TQQNA Sbjct: 425 EAGSKLVNEAGSTMNEIVDSVKRVTDIMAEIMAASQEQSSGIDQVNQAIGQMDQVTQQNA 484 Query: 483 ALVEQAAAAAQSLQDQAGRLAKVVSVFKLD 512 ALVE+AAAAA+SLQDQAG LA+VVS FKLD Sbjct: 485 ALVEEAAAAAESLQDQAGNLARVVSQFKLD 514