BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0129.p         (95 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B2TC91.1 B2TC91_BURPP Transcriptional regulator, DeoR family          107   5e-22
E6UXG7.1 E6UXG7_VARPD Transcriptional regulator, DeoR family          107   7e-22
B1GAQ7.1 B1GAQ7_9BURK Transcriptional regulator, DeoR family          103   1e-20
C5CQB7.1 C5CQB7_VARPS Transcriptional regulator, DeoR family           97   9e-19
A4JC67.1 A4JC67_BURVG Transcriptional regulator, DeoR family           97   1e-18

>B2TC91.1 B2TC91_BURPP Transcriptional regulator, DeoR family
          Length = 251

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 2/85 (2%)

Query: 1  MLTSQRKKHLLDLLNRDGRIVAKPVSEQLEVSEDTIRRDLRELAREGLLRRVHGGALPLL 60
          MLTSQRK+ +LD L R+G+++AK +S + EVSEDTIRRDLRELA EG L+RVHGGALP  
Sbjct: 1  MLTSQRKQLILDALKRNGQVIAKSLSAEFEVSEDTIRRDLRELAAEGQLQRVHGGALP-- 58

Query: 61 GTPALVMFANRQHIEPGAKADIGRA 85
           +PA V FA R+ IE  +KA IGRA
Sbjct: 59 ASPAAVDFAGRERIESASKAAIGRA 83


>E6UXG7.1 E6UXG7_VARPD Transcriptional regulator, DeoR family
          Length = 257

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 2/85 (2%)

Query: 1  MLTSQRKKHLLDLLNRDGRIVAKPVSEQLEVSEDTIRRDLRELAREGLLRRVHGGALPLL 60
          MLT QRK+H+L +L RDG +VAK +SE+L +SEDTIRRDLRELA EGLL+RVHGGALP+ 
Sbjct: 1  MLTRQRKQHILSVLQRDGNVVAKSLSEELALSEDTIRRDLRELAAEGLLQRVHGGALPI- 59

Query: 61 GTPALVMFANRQHIEPGAKADIGRA 85
            PA   FA+RQ + P  K  IGRA
Sbjct: 60 -APADTDFASRQQLAPDEKVAIGRA 83


>B1GAQ7.1 B1GAQ7_9BURK Transcriptional regulator, DeoR family
          Length = 251

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 2/85 (2%)

Query: 1  MLTSQRKKHLLDLLNRDGRIVAKPVSEQLEVSEDTIRRDLRELAREGLLRRVHGGALPLL 60
          MLTSQRK+ +L+ L RDG++VAK +S + +VSEDTIRRDLRELA EG L+RVHGGALP  
Sbjct: 1  MLTSQRKQLILEALRRDGQVVAKTLSAEFDVSEDTIRRDLRELAAEGQLQRVHGGALP-- 58

Query: 61 GTPALVMFANRQHIEPGAKADIGRA 85
           +PA V  A R+ IE  +KA IGRA
Sbjct: 59 ASPAAVDLAGRERIESASKAAIGRA 83


>C5CQB7.1 C5CQB7_VARPS Transcriptional regulator, DeoR family
          Length = 254

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 2/85 (2%)

Query: 1  MLTSQRKKHLLDLLNRDGRIVAKPVSEQLEVSEDTIRRDLRELAREGLLRRVHGGALPLL 60
          MLT QRK+H+L +L RDG +VAK +SE+L +SEDTIRRDLRELA EGLL+RVHGGALP+ 
Sbjct: 1  MLTRQRKQHILSVLQRDGNVVAKSLSEELALSEDTIRRDLRELAAEGLLQRVHGGALPVA 60

Query: 61 GTPALVMFANRQHIEPGAKADIGRA 85
             A   FA R  +    K  IGRA
Sbjct: 61 RAEA--DFAGRLQLATAEKVAIGRA 83


>A4JC67.1 A4JC67_BURVG Transcriptional regulator, DeoR family
          Length = 267

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 2/84 (2%)

Query: 1  MLTSQRKKHLLDLLNRDGRIVAKPVSEQLEVSEDTIRRDLRELAREGLLRRVHGGALPLL 60
          MLT+QRKK +LD L RDG+++A  +S Q  VSEDT+RRDLRELA EGLL+RVHGGALP  
Sbjct: 17 MLTTQRKKAILDALARDGQVLAVELSAQFGVSEDTVRRDLRELAAEGLLQRVHGGALP-- 74

Query: 61 GTPALVMFANRQHIEPGAKADIGR 84
           +PA+  FA R+ +E   K  I R
Sbjct: 75 ASPAVAPFAQRETLETAEKRRIAR 98