BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0029.p (294 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q46SD0.1 Q46SD0_CUPPJ Transcriptional regulator, LysR family 460 e-127 B2JT08.1 B2JT08_BURP8 Transcriptional regulator, LysR family 459 e-127 B9T7F2.1 B9T7F2_RICCO SDS degradation transcriptional activation... 459 e-127 Q3BT59.1 Q3BT59_XANC5 Transcriptional regulator, LysR family 457 e-127 B4Y220.1 B4Y220_ENTCL Putative transcriptional regulator, LysR f... 457 e-127 >Q46SD0.1 Q46SD0_CUPPJ Transcriptional regulator, LysR family Length = 294 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 231/293 (78%), Positives = 255/293 (87%) Query: 1 MREINLDRLRTLVAIADHGSFAEAARVLHLAPPTISLHIADLEERIGAALLSRKRGQIRP 60 MREI+LDRLRTLVAIADHGSFA AAR LHLAPPT+SLHIA+LE RIGA LLSRKRGQ+RP Sbjct: 1 MREISLDRLRTLVAIADHGSFAGAARALHLAPPTVSLHIAELEHRIGAPLLSRKRGQVRP 60 Query: 61 TTIGETLIERARRLLADAEQALEDVQRQVQGLAGRVRLGASTGAIAHLLPQALEVLGQDH 120 + IGE L+ER RRLLADAEQAL+D+QRQV+GL GR RLGASTGAIAHLLPQALEVL Q H Sbjct: 61 SAIGEVLLERGRRLLADAEQALDDIQRQVEGLEGRARLGASTGAIAHLLPQALEVLRQQH 120 Query: 121 PGIDVQVEVLTSQDTLTRLSEGTLDVGLVALPQTPVARLVVQPWRRDPVMAFLPSGWRSP 180 PGID+Q+ VLTSQ+TL+RL++GTLD+GLVALPQ PVA LV++PWRRDPVMAF+P W+ P Sbjct: 121 PGIDIQIAVLTSQETLSRLADGTLDIGLVALPQPPVAGLVIKPWRRDPVMAFVPGHWQCP 180 Query: 181 AQVTPEWLAAQPLILNDAGTRLSHLTQEWFAGGGQRPAPRIQLNYNDAIKSLVAAGYGAT 240 A+VTPEWLAAQPLILNDA TRLS T EWFA G PAPRIQLNYNDAIKSLVAAGYGA Sbjct: 181 ARVTPEWLAAQPLILNDATTRLSRQTAEWFAAAGHHPAPRIQLNYNDAIKSLVAAGYGAA 240 Query: 241 LLPHEQGAPLPDPRVQMLPLRPALWRQLGIAHRAENIERPTQHVLDVLWRFSL 293 LLPHE PLPD R+ M PLRPALWR+LGIAHRA +ER TQHVLDVLW L Sbjct: 241 LLPHEATTPLPDKRIVMRPLRPALWRRLGIAHRAGYVERSTQHVLDVLWDLRL 293 >B2JT08.1 B2JT08_BURP8 Transcriptional regulator, LysR family Length = 294 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/293 (78%), Positives = 255/293 (87%) Query: 1 MREINLDRLRTLVAIADHGSFAEAARVLHLAPPTISLHIADLEERIGAALLSRKRGQIRP 60 MREI+LDRLRTLVAIAD GSFA+AAR LHLAPPT+SLHIA+LE+R+GA LLSRKRGQ+RP Sbjct: 1 MREISLDRLRTLVAIADRGSFADAARALHLAPPTVSLHIAELEQRVGAPLLSRKRGQVRP 60 Query: 61 TTIGETLIERARRLLADAEQALEDVQRQVQGLAGRVRLGASTGAIAHLLPQALEVLGQDH 120 + IGE L+ERARRLLADAEQ LED+QRQVQGL GR RLGASTGAIAHLLPQALEVL Q H Sbjct: 61 SAIGEVLVERARRLLADAEQTLEDIQRQVQGLEGRARLGASTGAIAHLLPQALEVLRQHH 120 Query: 121 PGIDVQVEVLTSQDTLTRLSEGTLDVGLVALPQTPVARLVVQPWRRDPVMAFLPSGWRSP 180 P ID+Q+ VLTSQ+TL+RL++GTLDVGLVALPQ PV LV++PWRRDPVMAF+P+ WR P Sbjct: 121 PAIDIQIAVLTSQETLSRLADGTLDVGLVALPQPPVVGLVIKPWRRDPVMAFVPAHWRCP 180 Query: 181 AQVTPEWLAAQPLILNDAGTRLSHLTQEWFAGGGQRPAPRIQLNYNDAIKSLVAAGYGAT 240 A+VTPEWLAAQPLILNDA TRLS LT EWFA G P PRIQLN+NDAIKSLVAAGYGA Sbjct: 181 ARVTPEWLAAQPLILNDATTRLSRLTAEWFATAGHHPVPRIQLNFNDAIKSLVAAGYGAA 240 Query: 241 LLPHEQGAPLPDPRVQMLPLRPALWRQLGIAHRAENIERPTQHVLDVLWRFSL 293 LLPHE PLPD R+ M PLRPALWR+LGIA+RA +ER TQHVLDVLW L Sbjct: 241 LLPHEATTPLPDKRIVMRPLRPALWRRLGIAYRAGYVERSTQHVLDVLWDLRL 293 >B9T7F2.1 B9T7F2_RICCO SDS degradation transcriptional activation protein, putative Length = 294 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 230/293 (78%), Positives = 256/293 (87%) Query: 1 MREINLDRLRTLVAIADHGSFAEAARVLHLAPPTISLHIADLEERIGAALLSRKRGQIRP 60 MREI+LDRLRTLVAIADHGSFAEAAR LHLAPPT+SLHIA+LE RIGA LLSRKRGQIRP Sbjct: 1 MREISLDRLRTLVAIADHGSFAEAARALHLAPPTVSLHIAELEHRIGAPLLSRKRGQIRP 60 Query: 61 TTIGETLIERARRLLADAEQALEDVQRQVQGLAGRVRLGASTGAIAHLLPQALEVLGQDH 120 + IGE L+ER RRLLADA +AL+D+QRQV+GL GR RLGASTGAIAHLLPQALEVL Q H Sbjct: 61 SAIGELLVERGRRLLADAGRALDDIQRQVEGLEGRARLGASTGAIAHLLPQALEVLRQQH 120 Query: 121 PGIDVQVEVLTSQDTLTRLSEGTLDVGLVALPQTPVARLVVQPWRRDPVMAFLPSGWRSP 180 P ID+Q+ VLTSQ+TL+RL++GT+D+GLVALPQ VA LV++PWRRDPVMAF+P+ W+SP Sbjct: 121 PAIDIQIAVLTSQETLSRLTDGTVDIGLVALPQPAVAGLVIKPWRRDPVMAFVPAHWKSP 180 Query: 181 AQVTPEWLAAQPLILNDAGTRLSHLTQEWFAGGGQRPAPRIQLNYNDAIKSLVAAGYGAT 240 A+VTPEWLAAQPLILNDA TRLS T EWFA GG PAPRIQLNYNDAIKSLVAAGYGA Sbjct: 181 ARVTPEWLAAQPLILNDATTRLSRQTAEWFAAGGHHPAPRIQLNYNDAIKSLVAAGYGAA 240 Query: 241 LLPHEQGAPLPDPRVQMLPLRPALWRQLGIAHRAENIERPTQHVLDVLWRFSL 293 LLPHE PLPD R+ M PLRPALWR+LGIAHRA +ER TQHVLDVLW L Sbjct: 241 LLPHEATTPLPDKRIVMRPLRPALWRRLGIAHRAGYVERSTQHVLDVLWSLRL 293 >Q3BT59.1 Q3BT59_XANC5 Transcriptional regulator, LysR family Length = 294 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/292 (78%), Positives = 253/292 (86%) Query: 1 MREINLDRLRTLVAIADHGSFAEAARVLHLAPPTISLHIADLEERIGAALLSRKRGQIRP 60 MREI+LDRLRTLVAIAD GSFAEAARVLHLAPPT+SLHIADLE R+G LLSR RG+I+P Sbjct: 1 MREISLDRLRTLVAIADLGSFAEAARVLHLAPPTVSLHIADLESRVGGKLLSRTRGRIQP 60 Query: 61 TTIGETLIERARRLLADAEQALEDVQRQVQGLAGRVRLGASTGAIAHLLPQALEVLGQDH 120 + IGETL+ERARRLLADAEQALEDV+RQVQGLAGRVRLGASTGAIA L+PQALE LGQ H Sbjct: 61 SAIGETLVERARRLLADAEQALEDVERQVQGLAGRVRLGASTGAIAQLMPQALETLGQRH 120 Query: 121 PGIDVQVEVLTSQDTLTRLSEGTLDVGLVALPQTPVARLVVQPWRRDPVMAFLPSGWRSP 180 P IDVQV VLTSQ+TL +L+EG+L++GLVALPQTPV L ++PWRRDPVMAFLP+ W P Sbjct: 121 PAIDVQVAVLTSQETLKKLAEGSLEIGLVALPQTPVKELRIEPWRRDPVMAFLPARWECP 180 Query: 181 AQVTPEWLAAQPLILNDAGTRLSHLTQEWFAGGGQRPAPRIQLNYNDAIKSLVAAGYGAT 240 VTP WLAAQPLILND TRLS LT EWFA G++P PRIQLNYNDAIKSLVAAGYGAT Sbjct: 181 DVVTPGWLAAQPLILNDKTTRLSRLTSEWFASDGRQPTPRIQLNYNDAIKSLVAAGYGAT 240 Query: 241 LLPHEQGAPLPDPRVQMLPLRPALWRQLGIAHRAENIERPTQHVLDVLWRFS 292 LLPHE PLPD R+ M PL+P LWRQLGIAHR ++ERPTQHVLDVLW S Sbjct: 241 LLPHEASTPLPDTRIVMRPLQPLLWRQLGIAHRGGDVERPTQHVLDVLWGLS 292 >B4Y220.1 B4Y220_ENTCL Putative transcriptional regulator, LysR family Length = 294 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/292 (78%), Positives = 253/292 (86%) Query: 1 MREINLDRLRTLVAIADHGSFAEAARVLHLAPPTISLHIADLEERIGAALLSRKRGQIRP 60 MREI+LDRLRTLVAIAD GSFAEAARVLHLAPPT+SLHIADLE R+G LLSR RG+I+P Sbjct: 1 MREISLDRLRTLVAIADLGSFAEAARVLHLAPPTVSLHIADLESRVGGKLLSRTRGRIQP 60 Query: 61 TTIGETLIERARRLLADAEQALEDVQRQVQGLAGRVRLGASTGAIAHLLPQALEVLGQDH 120 + IGETL+ERARRLLADAEQALEDV+RQVQGLAGRVRLGASTGAIA L+PQALE LGQ H Sbjct: 61 SAIGETLVERARRLLADAEQALEDVERQVQGLAGRVRLGASTGAIAQLMPQALETLGQRH 120 Query: 121 PGIDVQVEVLTSQDTLTRLSEGTLDVGLVALPQTPVARLVVQPWRRDPVMAFLPSGWRSP 180 P IDVQV VLTSQ+TL +L+EG+L++GLVALPQTPV L ++PWRRDPVMAFLP+ W P Sbjct: 121 PAIDVQVAVLTSQETLKKLAEGSLEIGLVALPQTPVKELRIEPWRRDPVMAFLPARWECP 180 Query: 181 AQVTPEWLAAQPLILNDAGTRLSHLTQEWFAGGGQRPAPRIQLNYNDAIKSLVAAGYGAT 240 VTP WLAAQPLILND TRLS LT EWFA G++P PRIQLNYNDAIKSLVAAGYGAT Sbjct: 181 DVVTPGWLAAQPLILNDKTTRLSRLTSEWFASDGRQPTPRIQLNYNDAIKSLVAAGYGAT 240 Query: 241 LLPHEQGAPLPDPRVQMLPLRPALWRQLGIAHRAENIERPTQHVLDVLWRFS 292 LLPHE PLPD R+ M PL+P LWRQLGIAHR ++ERPTQHVLDVLW S Sbjct: 241 LLPHEASTPLPDTRIVMRPLQPLLWRQLGIAHRGGDVERPTQHVLDVLWGLS 292