BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0024.p (223 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXT3.1 D8IXT3_HERSS HipA-like protein 317 8e-85 F1VW15.1 F1VW15_9BURK Amidase 193 2e-47 E6VA30.1 E6VA30_VARPD HipA N-terminal domain protein 117 1e-24 C5CNU8.1 C5CNU8_VARPS HipA N-terminal domain protein 114 1e-23 C6BPB1.1 C6BPB1_RALP1 HipA N-terminal domain protein 114 1e-23 >D8IXT3.1 D8IXT3_HERSS HipA-like protein Length = 446 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 160/224 (71%), Positives = 179/224 (79%), Gaps = 6/224 (2%) Query: 1 MSMLRSLRIRLGVTEVGSLFALDDGRVYFRFDDAYAVD-PNRPVLSQLYRGSTEERTVAQ 59 MSMLRSLRIRLG TEVGSLFALDDGR YFRFDDAYA+ P RPVLSQLY STEERT AQ Sbjct: 1 MSMLRSLRIRLGQTEVGSLFALDDGRCYFRFDDAYALQGPQRPVLSQLYSASTEERTRAQ 60 Query: 60 LLNPALEANRGDGKGGLPAFFQNLLPEGQLRKHLIERAGLAPDDEFGLLAYCGKDLPGDV 119 LL+P L ANRGDG+GGLP FFQNLLPEGQLRKHL++RAGLAPDDEFGLLAYCG+DLPGDV Sbjct: 61 LLDPTLAANRGDGRGGLPPFFQNLLPEGQLRKHLVQRAGLAPDDEFGLLAYCGRDLPGDV 120 Query: 120 SALSETLDDRHLGRLIGQGRDSYEMSAGQLPTPDGESISGVQPKIGLVRAAGGRYVMRSK 179 SA +E LD+R LGRL+GQG DSYEMS+GQLP P GES+SGVQPK+ LVR AGGRYVMRSK Sbjct: 121 SASAEELDERGLGRLLGQGHDSYEMSSGQLPVPGGESLSGVQPKLALVREAGGRYVMRSK 180 Query: 180 DSRGAHFIGSCRPRIIRKCRKWNSPRWHWRAPPVCKCASTNWCR 223 DS G+HFI + N P+ + + + A + CR Sbjct: 181 DSHGSHFIAK-----LPATDYPNMPQVEFSSLTLAAAAGVHTCR 219 >F1VW15.1 F1VW15_9BURK Amidase Length = 562 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/160 (61%), Positives = 119/160 (74%), Gaps = 2/160 (1%) Query: 1 MSMLRSLRIRLGVTEVGSLFALDDGRVYFRFDDAYAVDPNRPVLSQLYRGSTEERTVAQL 60 MS +RSLRIR+G+T+ GSLF LDDGRVYFRFD+AYA++P RP+LS + G + T A+L Sbjct: 1 MSAVRSLRIRIGLTDAGSLFGLDDGRVYFRFDEAYALNPARPILSMSFTGEDDVATRARL 60 Query: 61 LNPALEANRGDGKGGLPAFFQNLLPEGQLRKHLIERAGLAPDDEFGLLAYCGKDLPGDVS 120 L+P L A G G G LP FF+NLLPEG LRKHL+ AGL+PDDE GLLAYCG DLPGDV Sbjct: 61 LDPLLPATFGAGNGKLPGFFRNLLPEGMLRKHLLSDAGLSPDDELGLLAYCGTDLPGDVW 120 Query: 121 ALSETLDDRHLGRLIGQGRDSYEMSAGQL--PTPDGESIS 158 AL+ETLDD LGRL+ QG D+ + G L P P+ +S Sbjct: 121 ALAETLDDVALGRLLTQGHDACRWTIGLLVAPLPNAARVS 160 >E6VA30.1 E6VA30_VARPD HipA N-terminal domain protein Length = 430 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/188 (42%), Positives = 98/188 (52%), Gaps = 9/188 (4%) Query: 4 LRSLRIRLGVTEVGSLFALDDGRVYFRFDDAYAVDPNRPVLSQLYRGS---TEERTVAQL 60 ++ L I LG G LF D F + P + VLS S T+ A + Sbjct: 3 VKILEISLGTRRFGKLFQYAD-LCRFVAEPELIAAPPQEVLSLSMVASDPATQAALWADV 61 Query: 61 LNPALEANRGDGKGGLPAFFQNLLPEGQLRKHLIERAGLAPDDEFGLLAYCGKDLPGDVS 120 NP A G LP FFQNLLPEG LR H+ + G +D F LLA CG DLPG VS Sbjct: 62 KNPLFNAQGGQ----LPRFFQNLLPEGVLRSHIAQLRGCRENDHFELLAACGGDLPGAVS 117 Query: 121 ALSETLDDRHLGRLIGQGRDSYEMSAGQLPTPDGESISGVQPKIGLVRAAGGRYVMRSKD 180 A ++D L RLI Q +D+ EMS +LP P G S+SGVQPK+GL R GGRYV R++ Sbjct: 118 AKPVSVDRGTLQRLITQDQDALEMSVVELPMPQGISVSGVQPKLGL-RRQGGRYVARTRA 176 Query: 181 SRGAHFIG 188 I Sbjct: 177 GASTRVIA 184 >C5CNU8.1 C5CNU8_VARPS HipA N-terminal domain protein Length = 432 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 95/188 (50%), Gaps = 9/188 (4%) Query: 4 LRSLRIRLGVTEVGSLFALDDGRVYFRFDDAYAVDPNRPVLSQLYRGSTEERTVA---QL 60 ++ L I LG G LF D F + P VLS S A + Sbjct: 3 VKILEISLGARRFGKLFQYAD-LCRFVAEPELVAAPPPEVLSLSMVASDPSAQAALWSDV 61 Query: 61 LNPALEANRGDGKGGLPAFFQNLLPEGQLRKHLIERAGLAPDDEFGLLAYCGKDLPGDVS 120 NP A G LP FFQNLLPEG LR H+ + G +D F LLA CG DLPG VS Sbjct: 62 KNPLFNAQGGQ----LPRFFQNLLPEGVLRSHIAQLRGCRENDHFELLAACGGDLPGAVS 117 Query: 121 ALSETLDDRHLGRLIGQGRDSYEMSAGQLPTPDGESISGVQPKIGLVRAAGGRYVMRSKD 180 A ++D L RLI Q +D+ EMS +LP P G S+SGVQPK+GL R GGRYV R++ Sbjct: 118 ARPVSVDRGTLQRLITQDQDALEMSVVELPMPQGISVSGVQPKLGL-RRQGGRYVARTRA 176 Query: 181 SRGAHFIG 188 I Sbjct: 177 GASTRVIA 184 >C6BPB1.1 C6BPB1_RALP1 HipA N-terminal domain protein Length = 453 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 9/195 (4%) Query: 3 MLRSLRIRLGVTEVGSLF--ALDDGRVYFRFDDAYA--VDPNRPVLSQLYRGSTEERTV- 57 + R+L I +G VG+LF +DD + F D+ Y VDP LS ++R Sbjct: 2 LFRALAIYIGQLRVGTLFKYGVDDPIIRFVADEDYVDLVDPPTLSLSMQAEDPAQQRAFW 61 Query: 58 AQLLNPALEANRGDGKGG--LPAFFQNLLPEGQLRKHLIERAGLAPDDEFGLLAYCGKDL 115 A + P + + LPAFFQ LLPEG R H+ APDD F +LA G+DL Sbjct: 62 ADVTQPVFNGSYSAKRDSFLLPAFFQGLLPEGVFRDHIAAERECAPDDHFEMLAATGRDL 121 Query: 116 PGDVSALSETLDDRHLGRLIGQGRDSYEMSAGQLPTPDGESISGVQPKIGLVRAAGGRYV 175 PG+VSA LD + + L+ Q DS EMS P DG S+SG+Q K+G+++ G RYV Sbjct: 122 PGNVSARPAELDFQEVAHLVTQDADSLEMSVVNEPMEDGISVSGMQAKLGVLK-EGDRYV 180 Query: 176 MRSKDSRGAHFIGSC 190 R+K + H I Sbjct: 181 ARTK-MQDTHVIAKL 194