BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0040.p         (90 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IWI3.1 D8IWI3_HERSS Glycogen synthase EC=2.4.1.21                    82   3e-14
F2LFA7.1 F2LFA7_BURGA Glycogen/starch synthase, ADP-glucose type       68   6e-10
C5AG41.1 C5AG41_BURGB Glycogen synthase EC=2.4.1.21                    67   9e-10

>D8IWI3.1 D8IWI3_HERSS Glycogen synthase EC=2.4.1.21
          Length = 529

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 53/77 (68%), Gaps = 6/77 (7%)

Query: 1  LQARVLLVSSEAVPLVKTGGLADVITALAVSLRKLDIDASILMPGYGVAVAHAEADATTA 60
          +QARVLLVSSEAVPLVKTGGLADVITALAVSLRK  IDASIL+P Y       EA     
Sbjct: 1  MQARVLLVSSEAVPLVKTGGLADVITALAVSLRKAGIDASILLPAY------PEAVRNLG 54

Query: 61 PLQPLALPRDLPGGXCR 77
            + + L   LPGG  R
Sbjct: 55 HTEQIGLKHGLPGGAGR 71


>F2LFA7.1 F2LFA7_BURGA Glycogen/starch synthase, ADP-glucose type
          Length = 553

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 6/85 (7%)

Query: 5  VLLVSSEAVPLVKTGGLADVITALAVSLRKLDIDASILMPGYGVAVAHAEADATTAPLQP 64
          VL+V++EA PL K+GGL D+++A A +LR+  ID SIL+PGY  A      D   AP  P
Sbjct: 5  VLMVAAEAAPLAKSGGLGDMVSACASALRQRGIDVSILLPGYESAF-----DQALAP-TP 58

Query: 65 LALPRDLPGGXCRRRTWCTPTIGMP 89
          L   RDLPGG  R      P  G+P
Sbjct: 59 LGYLRDLPGGDARLWRAAMPDTGVP 83


>C5AG41.1 C5AG41_BURGB Glycogen synthase EC=2.4.1.21
          Length = 540

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 6/73 (8%)

Query: 5  VLLVSSEAVPLVKTGGLADVITALAVSLRKLDIDASILMPGYGVAVAHAEADATTAPLQP 64
          VL+V++EA PL K+GGL D+++A A +LR+  +DASIL+PGY  A  HA      AP  P
Sbjct: 5  VLMVAAEAAPLAKSGGLGDMVSASASALRQRGVDASILLPGYESAFDHA-----VAP-TP 58

Query: 65 LALPRDLPGGXCR 77
          L   RDLPGG  R
Sbjct: 59 LGTIRDLPGGDAR 71