BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0016.p (732 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWF3.1 D8IWF3_HERSS Chemotaxis histidine kinase protein EC=2.7... 884 0.0 A6SYF1.1 A6SYF1_JANMA Chemotaxis related protein 858 0.0 E1TH81.1 E1TH81_BURSG CheA signal transduction histidine kinase 707 0.0 E2SUG5.1 E2SUG5_9RALS CheA signal transduction histidine kinase ... 704 0.0 B2TA26.1 B2TA26_BURPP Putative CheA signal transduction histidin... 701 0.0 >D8IWF3.1 D8IWF3_HERSS Chemotaxis histidine kinase protein EC=2.7.3.- Length = 808 Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/570 (81%), Positives = 505/570 (88%), Gaps = 3/570 (0%) Query: 1 MTIRLRITLLVILTFIAISAIGGYAVFQSRSSAVEVKSVTEGVVPSVLASSDLVGQLKDV 60 MTIR+RITLLVILTFIAI+ IGGYA++QSRSSAVEV+SVTEGV+PSVLAS+DL+GQLKDV Sbjct: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 Query: 61 QLAAMVMVAETDAQLVVQENEKLAAKKATLEKALEFQAGQAASQAQKGLIEQARESLDNY 120 QLAAMVMV E D QLV QENEKLA KKA LEKAL QA QA AQ+GLIEQA+ESLDNY Sbjct: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 Query: 121 FGAIDSTAKFKLAGKDALAQASFFGNVVQYQAELEGVVDTLRIEKNRSKDSAIAALNQNL 180 FGAID+TAKFKLAGK+ +AQA FFG V+QYQ ELEG+V+TLRIEKNR KD+AIA+LN L Sbjct: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 Query: 181 ASTTTTISGVTAVAVIALALIGFLLYRQITGPISRMQTMMTEIAASQDFTRRLPVDRMDE 240 A TTTTIS VT +AV+ L IGFLLYRQITGPISRM MM EIA SQDFTRRLPV RMDE Sbjct: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASALVKQKTADMQAMLQNIPQGILTVVDGNTVHPEYSAFLETV 300 VGHSIVAFNGMVEKIEEASA V+QKTADMQAMLQNIPQGILT+V+GN +HPEYSAFLETV Sbjct: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 Query: 301 FETTDIAGRDLMELVFAGTSLGADTLSQIEAIGGACIGEDIMNFEFNEHLMVGEVEKKMA 360 FETTDIAGRD+MELVFA T LGADTLSQIEAIGGACIGED+MNFEFN HLMVGE+EK MA Sbjct: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 Query: 361 DGRVKILDLSWSPITDDADTVIRLMLCVRDVTELRKLAAEANEQKHELEMIGEILAVAAP 420 DG KILDLSWSPITD+ADTVIRLMLCVRDVTELR+LAAEANEQK ELEMIGEILAV Sbjct: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 Query: 421 KFEDFIATSRRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLSNVVHDV 480 KF +FI+++RRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHL+NVVH Sbjct: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 Query: 481 EQHYDDLRHPETGAVWEQERLLQDLARVRVAVDRYARINEVTLGR--KAAPEQA-AAVER 537 EQHYDDLRHP +GAVW QE LL+ LA+VR +DRYARIN+VTLGR AA EQ R Sbjct: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 Query: 538 HILTIDRKHIQESLHRLETVNTANLHELRA 567 H++TIDRKHI++SL RLE VNTANLHEL A Sbjct: 541 HVITIDRKHIEQSLERLENVNTANLHELVA 570 >A6SYF1.1 A6SYF1_JANMA Chemotaxis related protein Length = 806 Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/567 (74%), Positives = 491/567 (86%), Gaps = 2/567 (0%) Query: 1 MTIRLRITLLVILTFIAISAIGGYAVFQSRSSAVEVKSVTEGVVPSVLASSDLVGQLKDV 60 MTIRLRITLLVILTFIAIS IGGYAVFQSR SAVEVK+VTEGVVPS LASSDLV QLK+V Sbjct: 1 MTIRLRITLLVILTFIAISLIGGYAVFQSRGSAVEVKTVTEGVVPSTLASSDLVAQLKEV 60 Query: 61 QLAAMVMVAETDAQLVVQENEKLAAKKATLEKALEFQAGQAASQAQKGLIEQARESLDNY 120 QL+AM +V+E D Q+ VQ NEKL+AKK LEKAL+ Q Q SQAQ+GL+EQA+ESL NY Sbjct: 61 QLSAMAIVSEPDMQIAVQNNEKLSAKKDILEKALDLQLKQVDSQAQRGLVEQAKESLVNY 120 Query: 121 FGAIDSTAKFKLAGKDALAQASFFGNVVQYQAELEGVVDTLRIEKNRSKDSAIAALNQNL 180 F AIDST + KLAGKD +A+AS FGNVVQ+Q ELE ++DTLRIEKNRSKD AIAALN+NL Sbjct: 121 FDAIDSTMQLKLAGKDEIAKASLFGNVVQFQQELEQIIDTLRIEKNRSKDVAIAALNENL 180 Query: 181 ASTTTTISGVTAVAVIALALIGFLLYRQITGPISRMQTMMTEIAASQDFTRRLPVDRMDE 240 A+TTT I+ VT AVI LA IGFLLYRQITGPISRMQ MM+EIAASQDFTRR+P+DRMDE Sbjct: 181 ATTTTAITVVTIFAVIFLATIGFLLYRQITGPISRMQRMMSEIAASQDFTRRVPIDRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASALVKQKTADMQAMLQNIPQGILTVVDGNTVHPEYSAFLETV 300 VGHSI AFNGM+EKIEEASALV+QKTAD+Q MLQNIPQGILT+VDGN +HPEYSA+LETV Sbjct: 241 VGHSIKAFNGMLEKIEEASALVRQKTADIQTMLQNIPQGILTIVDGNKIHPEYSAYLETV 300 Query: 301 FETTDIAGRDLMELVFAGTSLGADTLSQIEAIGGACIGEDIMNFEFNEHLMVGEVEKKMA 360 FE+ DI GRD+M+ VFA T+LGADTL+Q+EAIGGACIGED+MNFEFN+HLMVGE+EK+M Sbjct: 301 FESKDIVGRDIMDFVFADTNLGADTLAQMEAIGGACIGEDLMNFEFNQHLMVGEIEKRMP 360 Query: 361 DGRVKILDLSWSPITDDADTVIRLMLCVRDVTELRKLAAEANEQKHELEMIGEILAVAAP 420 DGRVKILDLSWSPI D+ D ++RLMLCVRDVTELR+LAAEANEQK ELE+IGEILAV+ Sbjct: 361 DGRVKILDLSWSPIVDENDMIVRLMLCVRDVTELRQLAAEANEQKRELEIIGEILAVSQD 420 Query: 421 KFEDFIATSRRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLSNVVHDV 480 KF DFI +S +F+DENE ++ N E++ F +AKLFRNMHTIKGNGRTYGLLHL+++VH+ Sbjct: 421 KFHDFIVSSLKFIDENELVIRHNTESSDFTVAKLFRNMHTIKGNGRTYGLLHLADIVHEA 480 Query: 481 EQHYDDLRHPETGAVWEQERLLQDLARVRVAVDRYARINEVTLGRKAAPEQAAAVERHIL 540 EQHYD+LR P++ VW+Q LL +LA VR AV+RYARINEV+L R+ P + V+ + L Sbjct: 481 EQHYDELRKPDSDRVWDQALLLDELAGVRAAVERYARINEVSLSRQ-GPGRGGKVDSY-L 538 Query: 541 TIDRKHIQESLHRLETVNTANLHELRA 567 ID+KHIQESLHRLE VNTANLHEL A Sbjct: 539 MIDKKHIQESLHRLENVNTANLHELVA 565 >E1TH81.1 E1TH81_BURSG CheA signal transduction histidine kinase Length = 796 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/569 (63%), Positives = 446/569 (78%), Gaps = 3/569 (0%) Query: 1 MTIRLRITLLVILTFIAISAIGGYAVFQSRSSAVEVKSVTEGVVPSVLASSDLVGQLKDV 60 MTIR RITLLV+L F+A+SAIGGYAV+Q+R SA EV+ VTEGVVPS LAS+DLV Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVAETDAQLVVQENEKLAAKKATLEKALEFQAGQAASQAQKGLIEQARESLDNY 120 Q+A M +V D +V Q E+L K+ LE+AL QA AAS AQKGL+ QAR+SLDNY Sbjct: 61 QIATMTLVYAPDGDMVAQAQEELKKKRIALEQALALQAKDAASHAQKGLVSQARDSLDNY 120 Query: 121 FGAIDSTAKFKLAGKDALAQASFFGNVVQYQAELEGVVDTLRIEKNRSKDSAIAALNQNL 180 F AI TAK K GK+ LAQA F NV QY+ ELEG+VDTLR+EKNR KD AI ALN L Sbjct: 121 FSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVDTLRVEKNRQKDEAITALNATL 180 Query: 181 ASTTTTISGVTAVAVIALALIGFLLYRQITGPISRMQTMMTEIAASQDFTRRLPVDRMDE 240 A+TTT I+ VT +A++ L IG LLYRQIT P+SRMQ MM+EIA+SQDFTRR+PV R+DE Sbjct: 181 ATTTTAIAAVTGIAILLLTSIGALLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASALVKQKTADMQAMLQNIPQGILTVVDGNTVHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SA +KQKTAD+QAMLQN+ QGILTV+DG +H EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDLMELVFAGTSLGADTLSQIEAIGGACIGEDIMNFEFNEHLMVGEVEKKMA 360 FET DIAGR LM+LVFA T LGAD LSQ++A AC+GED +NF FN+HL+VGE+ K+M Sbjct: 301 FETKDIAGRSLMDLVFADTDLGADALSQVDAAAHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGRVKILDLSWSPITDDADTVIRLMLCVRDVTELRKLAAEANEQKHELEMIGEILAVAAP 420 DGRVKILDLSWS ITD+ D ++RLMLCVRDVTELRKLAAEA+EQ+ L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIVRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFEDFIATSRRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLSNVVHDV 480 KF FI +S F+ ENE+I+ ++ EA AIA+LFRNMHTIKGN RTY L HL++VVH+ Sbjct: 421 KFHHFIESSAGFISENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTDVVHET 480 Query: 481 EQHYDDLRHPETGAVWEQERLLQDLARVRVAVDRYARINEVTLGRK--AAPEQAAAVERH 538 EQ Y +LR P+ W+QE L+Q+LARVR A++ YARINE +LGRK A A R+ Sbjct: 481 EQSYHELRRPDADRSWDQEHLMQELARVREAIEAYARINEHSLGRKGQARRNDAGNAGRY 540 Query: 539 ILTIDRKHIQESLHRLETVNTANLHELRA 567 ++ ++++ IQ +L+ L+T + LHEL+A Sbjct: 541 VM-VEKEQIQRTLNLLDTTDVNALHELQA 568 >E2SUG5.1 E2SUG5_9RALS CheA signal transduction histidine kinase (STHK) Length = 794 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/567 (62%), Positives = 437/567 (77%), Gaps = 6/567 (1%) Query: 1 MTIRLRITLLVILTFIAISAIGGYAVFQSRSSAVEVKSVTEGVVPSVLASSDLVGQLKDV 60 MTIR RITLLV+L F+A++AIGGYAV+Q+RSSA EV+ VTEGVVPS LAS+DLV +KDV Sbjct: 1 MTIRHRITLLVVLMFVALAAIGGYAVYQTRSSAAEVRQVTEGVVPSALASADLVSLVKDV 60 Query: 61 QLAAMVMVAETDAQLVVQENEKLAAKKATLEKALEFQAGQAASQAQKGLIEQARESLDNY 120 QLA MV+V DA +V Q + L AK+A L AL+ QA +A S AQ+GL+ QA+E++D+Y Sbjct: 61 QLATMVLVYAPDANIVAQAKDDLKAKEAALRAALDVQAKRANSHAQEGLVAQAKEAVDSY 120 Query: 121 FGAIDSTAKFKLAGKDALAQASFFGNVVQYQAELEGVVDTLRIEKNRSKDSAIAALNQNL 180 AI T KLAGKD LAQA F NV Y+ LE +V+TLRIEKNR KD AIA LN L Sbjct: 121 VDAIQQTTDMKLAGKDELAQAFLFANVASYRDVLEKIVETLRIEKNREKDEAIAGLNGKL 180 Query: 181 ASTTTTISGVTAVAVIALALIGFLLYRQITGPISRMQTMMTEIAASQDFTRRLPVDRMDE 240 AST TTI V+ VAV+ L IG LLYRQIT P++RMQ M+EIA SQDFTRR+PV RMDE Sbjct: 181 ASTATTIGVVSGVAVVLLTAIGMLLYRQITRPLTRMQAEMSEIATSQDFTRRVPVGRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASALVKQKTADMQAMLQNIPQGILTVVDGNTVHPEYSAFLETV 300 +GHS+VAFN M+EKI+E +AL+KQKTAD+QAMLQN+ QGILTVV+G VH EYS +LE++ Sbjct: 241 IGHSVVAFNQMIEKIQENAALLKQKTADIQAMLQNMQQGILTVVEGGVVHEEYSVYLESI 300 Query: 301 FETTDIAGRDLMELVFAGTSLGADTLSQIEAIGGACIGEDIMNFEFNEHLMVGEVEKKMA 360 FET +IAGR LMEL+FA TSLGADTLSQ+EA AC+G+DI+NF FN+HL+ EVEK+M Sbjct: 301 FETQEIAGRRLMELIFADTSLGADTLSQVEAAVDACLGQDIINFAFNQHLLASEVEKRMP 360 Query: 361 DGRVKILDLSWSPITDDADTVIRLMLCVRDVTELRKLAAEANEQKHELEMIGEILAVAAP 420 DGR K LDLSWS ITD++DT++RLMLCVRDVTELRKLAAEA+EQ+ LEMIGEILAV+ Sbjct: 361 DGRTKTLDLSWSAITDESDTILRLMLCVRDVTELRKLAAEASEQRRNLEMIGEILAVSQE 420 Query: 421 KFEDFIATSRRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLSNVVHDV 480 KF+ FI +S F+ ENE+I+ Q +A + AIA LFRNMHTIKGN RTY L HL+NVVH+ Sbjct: 421 KFQHFIDSSTTFVHENERIIRQYSQADSQAIAALFRNMHTIKGNARTYNLQHLTNVVHET 480 Query: 481 EQHYDDLRHPETGAVWEQERLLQDLARVRVAVDRYARINEVTLGRK--AAPEQAAAVERH 538 EQ Y LR ++ W+Q+ L+Q+LARVR A++ YARINEV LGRK AAP A+ Sbjct: 481 EQTYHALREADSEHTWDQDWLMQELARVREAIENYARINEVKLGRKGDAAPGNASQAAPD 540 Query: 539 ILTIDRKHIQESLHRLETVNTANLHEL 565 ++ IQESL LE+ N +L+EL Sbjct: 541 VMA----RIQESLRLLESANPGSLYEL 563 >B2TA26.1 B2TA26_BURPP Putative CheA signal transduction histidine kinase Length = 796 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/568 (62%), Positives = 442/568 (77%), Gaps = 1/568 (0%) Query: 1 MTIRLRITLLVILTFIAISAIGGYAVFQSRSSAVEVKSVTEGVVPSVLASSDLVGQLKDV 60 MTIR RITLLV+L F+A+SAIGGYAV+Q+R SA EV+ VTEGVVPS LAS+DLV Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVAETDAQLVVQENEKLAAKKATLEKALEFQAGQAASQAQKGLIEQARESLDNY 120 QLA M +V DA +V Q ++L K+A+L++AL QA AAS AQKGL+ QA +SL+NY Sbjct: 61 QLATMTLVYAPDANMVAQAQDELKKKRASLQQALALQAKDAASHAQKGLVAQANDSLENY 120 Query: 121 FGAIDSTAKFKLAGKDALAQASFFGNVVQYQAELEGVVDTLRIEKNRSKDSAIAALNQNL 180 F AI TAK K GK+ LAQA F NV QY+ ELEG+V+TLR+EKNR KD AI+ALN L Sbjct: 121 FSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDEAISALNTTL 180 Query: 181 ASTTTTISGVTAVAVIALALIGFLLYRQITGPISRMQTMMTEIAASQDFTRRLPVDRMDE 240 ++TTT I+ VT +A+I L IG LLYRQIT P+SRMQ MM+EIA+SQDFTRR+PV R+DE Sbjct: 181 STTTTAIAAVTGIAIILLTSIGSLLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASALVKQKTADMQAMLQNIPQGILTVVDGNTVHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SA +KQKTAD+QAMLQN+ QGILTV+DG +H EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDLMELVFAGTSLGADTLSQIEAIGGACIGEDIMNFEFNEHLMVGEVEKKMA 360 FET DIAGR LM+LVFA T LG+D LSQ++A AC+GED +NF FN+HL+VGE+ K+M Sbjct: 301 FETKDIAGRGLMDLVFADTDLGSDALSQVDAATHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGRVKILDLSWSPITDDADTVIRLMLCVRDVTELRKLAAEANEQKHELEMIGEILAVAAP 420 DGRVKILDLSWS ITD+ D + RLMLCVRDVTELRKLAAEA+EQ+ L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIQRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFEDFIATSRRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLSNVVHDV 480 KF FI +S F+ ENE+I+ ++ EA AIA+LFRNMHTIKGN RTY L HL+NVVH+ Sbjct: 421 KFHHFIESSAGFISENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHET 480 Query: 481 EQHYDDLRHPETGAVWEQERLLQDLARVRVAVDRYARINEVTLGRKAAPE-QAAAVERHI 539 EQ Y +LR P+ W+QE L+ +L RVR A++ YA+INE +LGRK + AA H Sbjct: 481 EQSYHELRQPDADRSWDQEHLMSELTRVREAIESYAKINEQSLGRKNKNQTNTAANSAHY 540 Query: 540 LTIDRKHIQESLHRLETVNTANLHELRA 567 + + +HIQ +L LE N LHEL++ Sbjct: 541 VMVANEHIQHTLSMLEQTNAGELHELQS 568