BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0291.p         (298 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q39MA0.1 Q39MA0_BURS3 Transcriptional regulator, LysR family          566   e-159
E3HPN5.1 E3HPN5_ACHXA HTH-type transcriptional regulator MetR 2       557   e-157
D8IWY6.1 D8IWY6_HERSS MetE/MetH family transcription regulator p...   533   e-149
A1TQW2.1 A1TQW2_ACIAC Transcriptional regulator, LysR family          510   e-143
F2LN95.1 F2LN95_BURGA LysR family transcriptional regulator           508   e-142

>Q39MA0.1 Q39MA0_BURS3 Transcriptional regulator, LysR family
          Length = 296

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/289 (95%), Positives = 279/289 (96%)

Query: 10  SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69
           SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA
Sbjct: 8   SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 67

Query: 70  VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129
           VANRVLPQLNLAEERLQQFAQGERG LRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ
Sbjct: 68  VANRVLPQLNLAEERLQQFAQGERGTLRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 127

Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189
           KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAG HKLAKEEYV+PKQL
Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGNHKLAKEEYVQPKQL 187

Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249
           SNEVLVTYPVPVDRLDIYSMFLTPAGI PKRHK IETTDIMLQMVASGRGVAALPRWLVL
Sbjct: 188 SNEVLVTYPVPVDRLDIYSMFLTPAGIAPKRHKAIETTDIMLQMVASGRGVAALPRWLVL 247

Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGPATA 298
           EYADKMDVVPVRLG+NGIAKHI+LGARE DV  DYLRAFIEQAKG   A
Sbjct: 248 EYADKMDVVPVRLGENGIAKHIYLGAREADVGTDYLRAFIEQAKGRGAA 296


>E3HPN5.1 E3HPN5_ACHXA HTH-type transcriptional regulator MetR 2
          Length = 296

 Score =  557 bits (1435), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/289 (93%), Positives = 278/289 (96%)

Query: 10  SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69
           SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA
Sbjct: 8   SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 67

Query: 70  VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129
           VANRVLPQL LAEERL+QFAQGERG+LRIGMECHPCYQWLLK+VSPYLAAWPDVDVDVKQ
Sbjct: 68  VANRVLPQLALAEERLRQFAQGERGSLRIGMECHPCYQWLLKIVSPYLAAWPDVDVDVKQ 127

Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189
           KFQFGGIGALFGYEIDLLVTPDPL+KPGLVFEPVFDYEQVLVVAG H LAKEEYV PKQL
Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLNKPGLVFEPVFDYEQVLVVAGNHPLAKEEYVTPKQL 187

Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249
           SNEVLV YPVPVDRLDIY+MFLTPAGITPKRHK IETTDIMLQMVASGRGVAALPRWLVL
Sbjct: 188 SNEVLVAYPVPVDRLDIYNMFLTPAGITPKRHKAIETTDIMLQMVASGRGVAALPRWLVL 247

Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGPATA 298
           EYAD M+VVPVRLGK GIAKHI+LGARE DV IDY+RAFIEQAK PATA
Sbjct: 248 EYADTMNVVPVRLGKKGIAKHIYLGAREADVGIDYMRAFIEQAKKPATA 296


>D8IWY6.1 D8IWY6_HERSS MetE/MetH family transcription regulator protein
          Length = 295

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/284 (90%), Positives = 272/284 (95%)

Query: 10  SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69
           SIVQEVE+QGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGR LRLTQAGQYLLA
Sbjct: 8   SIVQEVERQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRHLRLTQAGQYLLA 67

Query: 70  VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129
           VANRVLPQL+LAEERL+QFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ
Sbjct: 68  VANRVLPQLSLAEERLRQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 127

Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189
           KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVA  H LA  +YVKP+QL
Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVASDHPLADVDYVKPRQL 187

Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249
           SNEVLVTYPVPVDRLDIY+ FL PAGI P+RHK IETTDIMLQMVASGRGVAALPRWLVL
Sbjct: 188 SNEVLVTYPVPVDRLDIYTQFLAPAGIVPRRHKTIETTDIMLQMVASGRGVAALPRWLVL 247

Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAK 293
           EYA++M+VVPVRLGK GIAKHI+LGARE+DV IDYLRAFI++A+
Sbjct: 248 EYAEQMEVVPVRLGKQGIAKHIYLGARESDVEIDYLRAFIDEAR 291


>A1TQW2.1 A1TQW2_ACIAC Transcriptional regulator, LysR family
          Length = 304

 Score =  510 bits (1314), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/289 (85%), Positives = 265/289 (91%)

Query: 10  SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69
           SIV++VEKQGSLTAAAGVL++TQSALSHSMKKLEQQLGTD+WLREGRSLRLTQAGQYLLA
Sbjct: 8   SIVRQVEKQGSLTAAAGVLNLTQSALSHSMKKLEQQLGTDVWLREGRSLRLTQAGQYLLA 67

Query: 70  VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129
           VANRVLPQL LAEERL QFAQGERGALRIGMECHPCYQWLLKVVSPYL AWPDVDVDVKQ
Sbjct: 68  VANRVLPQLELAEERLGQFAQGERGALRIGMECHPCYQWLLKVVSPYLTAWPDVDVDVKQ 127

Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189
           KFQFGGIGALFGYEIDLLVTPDPL KPGL FEPVFDYEQVLVVAGGH LA   YVKP+QL
Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLYKPGLQFEPVFDYEQVLVVAGGHALASAAYVKPQQL 187

Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249
           + EVL++YPV ++RLDIY+ FL PAG+TP+RHK IETTDIMLQMVASGRGVAALPRWLV 
Sbjct: 188 TGEVLISYPVDIERLDIYNQFLLPAGVTPRRHKAIETTDIMLQMVASGRGVAALPRWLVE 247

Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGPATA 298
           EYA +MDVVPVRLG  GIAK IFLGARE D +IDY+RAFIE A+ PA A
Sbjct: 248 EYAARMDVVPVRLGARGIAKQIFLGAREADTAIDYVRAFIELARQPAAA 296


>F2LN95.1 F2LN95_BURGA LysR family transcriptional regulator
          Length = 302

 Score =  508 bits (1307), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/286 (86%), Positives = 264/286 (92%)

Query: 10  SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69
           SIVQ+VEKQGSLTAAAGVL++TQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA
Sbjct: 8   SIVQQVEKQGSLTAAAGVLNLTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 67

Query: 70  VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129
           VANRVLPQL+LAEERL QFA GERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ
Sbjct: 68  VANRVLPQLDLAEERLGQFALGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 127

Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189
           KFQFGGIGALFGYEIDLLVTPDPL KPGL FEPVFDYEQVLVVA GH LA   YVKP+QL
Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLFKPGLKFEPVFDYEQVLVVAKGHALASATYVKPQQL 187

Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249
           + EVL++YPV ++RLDIY+ FL PAG+TP+RHK IETTDIMLQMVASGRGVAALPRWLV 
Sbjct: 188 TPEVLISYPVDIERLDIYNQFLLPAGVTPRRHKAIETTDIMLQMVASGRGVAALPRWLVE 247

Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGP 295
           EYA +MDVVPVRLG  GIAK IFLGARETD +IDY+RAFIE A+ P
Sbjct: 248 EYAARMDVVPVRLGARGIAKQIFLGARETDTAIDYVRAFIELAREP 293