BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0288.p (271 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IVM8.1 D8IVM8_HERSS ATP synthase subunit a 487 e-136 A6T476.1 ATP6_JANMA ATP synthase subunit a 451 e-125 A4GAH5.1 A4GAH5_HERAR ATP synthase subunit a 432 e-119 C3XC75.1 C3XC75_OXAFO ATP synthase subunit a 392 e-107 Q3JXV2.1 Q3JXV2_BURP1 ATP synthase subunit a 1 391 e-107 >D8IVM8.1 D8IVM8_HERSS ATP synthase subunit a Length = 273 Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust. Identities = 250/269 (92%), Positives = 259/269 (96%) Query: 3 AAAHAPTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKAT 62 AA HAPTASEYIVHHLGH S+QHQ KIVDFSI+N+DTIFWSVFCGV+ CLFM+LAARKAT Sbjct: 5 AAEHAPTASEYIVHHLGHLSTQHQTKIVDFSILNVDTIFWSVFCGVIACLFMFLAARKAT 64 Query: 63 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSG 122 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAP+ALTVFVWVALMNSLDFLPVDL SG Sbjct: 65 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPVALTVFVWVALMNSLDFLPVDLASG 124 Query: 123 IMRLAGLEEIHHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGIWL 182 I+ L GL E+HHRIVPTADLNGTLGIALGVLALMLYYS KIKGAGGFIHELFAAPFGIWL Sbjct: 125 ILGLFGLGEMHHRIVPTADLNGTLGIALGVLALMLYYSVKIKGAGGFIHELFAAPFGIWL 184 Query: 183 APFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSIWA 242 APFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGS ATAFGF+GHVIAGSIWA Sbjct: 185 APFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSTATAFGFIGHVIAGSIWA 244 Query: 243 IFHILIVLLQAFIFMMLTLVYLGQAHEAH 271 IFHILIVLLQAFIFMMLTLVYLGQAHEAH Sbjct: 245 IFHILIVLLQAFIFMMLTLVYLGQAHEAH 273 >A6T476.1 ATP6_JANMA ATP synthase subunit a Length = 273 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 226/267 (84%), Positives = 249/267 (93%), Gaps = 2/267 (0%) Query: 7 APTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKATSGVP 66 APTASEYIVHHLGHFS++HQDKIVDFSIINMDTIFWS+F GVVGCLFMYLAARKATSGVP Sbjct: 7 APTASEYIVHHLGHFSTKHQDKIVDFSIINMDTIFWSIFAGVVGCLFMYLAARKATSGVP 66 Query: 67 GRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSGIMRL 126 GRFQA VEM+VEMV++Q+K+IVHGDRTFIAPLALTVFVWVALMNSLDFLPVD+ S Sbjct: 67 GRFQAAVEMIVEMVDNQAKSIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDMFSAFFHA 126 Query: 127 AGLEEI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGIWLAP 184 GL+ + HHR+VPTADLNGT+GIALGV ALM++Y+ KIKGAGGF+HELFAAPFGIWLAP Sbjct: 127 VGLDSLITHHRVVPTADLNGTMGIALGVFALMIFYNIKIKGAGGFVHELFAAPFGIWLAP 186 Query: 185 FNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSIWAIF 244 FNLLLN+IEFAAKTVSL MRLFGNMYAGELLFLLIALLGS ATAFGF GHV+AG++WAIF Sbjct: 187 FNLLLNMIEFAAKTVSLAMRLFGNMYAGELLFLLIALLGSTATAFGFFGHVVAGTLWAIF 246 Query: 245 HILIVLLQAFIFMMLTLVYLGQAHEAH 271 HILIV LQAFIFMMLTLVY+GQAHE+H Sbjct: 247 HILIVFLQAFIFMMLTLVYIGQAHESH 273 >A4GAH5.1 A4GAH5_HERAR ATP synthase subunit a Length = 281 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/263 (83%), Positives = 243/263 (92%), Gaps = 2/263 (0%) Query: 11 SEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKATSGVPGRFQ 70 SEYIVHHLGHFS++HQDKIVDFSIINMDTIFWSVF GVVGC FM+LAARKATSGVPGRFQ Sbjct: 19 SEYIVHHLGHFSTKHQDKIVDFSIINMDTIFWSVFAGVVGCFFMWLAARKATSGVPGRFQ 78 Query: 71 AFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSGIMRLAGLE 130 A VEMVVEMV++Q+K+IVHGDR+FIAPLALTVFVWVALMNSLDFLPVD+ S + + G++ Sbjct: 79 AAVEMVVEMVDNQAKSIVHGDRSFIAPLALTVFVWVALMNSLDFLPVDMFSALFQAVGID 138 Query: 131 EI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGIWLAPFNLL 188 I +HR VPTADLNGT+GIALGV ALM++Y+ KIKGAGGF+ ELFAAPFGIWLAPFNLL Sbjct: 139 HIIPYHRAVPTADLNGTMGIALGVFALMIFYNIKIKGAGGFVRELFAAPFGIWLAPFNLL 198 Query: 189 LNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSIWAIFHILI 248 LN+IEFAAKTVSL MRLFGNMYAGELLFLLIALLGS ATAFGF GHV+AG++WAIFHILI Sbjct: 199 LNMIEFAAKTVSLAMRLFGNMYAGELLFLLIALLGSTATAFGFFGHVLAGTLWAIFHILI 258 Query: 249 VLLQAFIFMMLTLVYLGQAHEAH 271 V LQAFIFMMLTLVY+GQAHE H Sbjct: 259 VFLQAFIFMMLTLVYIGQAHEGH 281 >C3XC75.1 C3XC75_OXAFO ATP synthase subunit a Length = 278 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 189/278 (67%), Positives = 226/278 (81%), Gaps = 7/278 (2%) Query: 1 MTAAAHAPTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARK 60 M+A AHAP+ +EY+ HHL +F + HQDKIVDFSIIN+DT+FWSVFCG + C+FMY+ ARK Sbjct: 1 MSADAHAPSLAEYVTHHLQNFGTSHQDKIVDFSIINLDTVFWSVFCGALACIFMYIVARK 60 Query: 61 ATSGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLV 120 ATSG P R Q+ +EM+VEM + QSKA +HGDR FIAPLALT+FVW++LMN LDFLPVDL Sbjct: 61 ATSGKPNRVQSILEMLVEMADTQSKAQIHGDRRFIAPLALTIFVWISLMNCLDFLPVDLF 120 Query: 121 SGIMRLAGLEEI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPF 178 + GL + +HR+VPTADLNGT+GI+LGV+ LM Y+ K+KG GFIHELFAAPF Sbjct: 121 GQAFKWLGLSDTIPYHRVVPTADLNGTVGISLGVVVLMFYFGIKVKGLKGFIHELFAAPF 180 Query: 179 GIWLAPFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAAT-----AFGFVG 233 GIWLAPFN LNIIE+ AK +SL MRL+GNMYAGELLFL+IA+LG+ A F FVG Sbjct: 181 GIWLAPFNFALNIIEYIAKIISLAMRLWGNMYAGELLFLMIAMLGAYAAMSLGGGFLFVG 240 Query: 234 HVIAGSIWAIFHILIVLLQAFIFMMLTLVYLGQAHEAH 271 H+IAG+IWAIFHILIV LQAFIFM+LTLVYLG AHE H Sbjct: 241 HLIAGTIWAIFHILIVFLQAFIFMILTLVYLGLAHEGH 278 >Q3JXV2.1 Q3JXV2_BURP1 ATP synthase subunit a 1 Length = 283 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/282 (72%), Positives = 226/282 (80%), Gaps = 14/282 (4%) Query: 2 TAAAHAPTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKA 61 + AP SEYI HHL +FS+ HQ I D + N+DT+FWS+ CG++ L + LAARKA Sbjct: 4 SEGTRAPDPSEYIAHHLQNFSTSHQTSIFDIHVWNLDTLFWSIVCGLITILLLRLAARKA 63 Query: 62 TSGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVS 121 TSGVPGRFQ VEM+VEMVEDQSKAIVHG+R FIAPLALTVFVWVALMNSLDFLPVDL Sbjct: 64 TSGVPGRFQCAVEMLVEMVEDQSKAIVHGNRAFIAPLALTVFVWVALMNSLDFLPVDLPG 123 Query: 122 GIMRLAGLEEI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFG 179 ++ GL I HHRIVPTADLNGTLGIALGV LMLYYS KIKGAGGF HEL +APFG Sbjct: 124 RVIGWLGLSGIISHHRIVPTADLNGTLGIALGVFVLMLYYSIKIKGAGGFAHELVSAPFG 183 Query: 180 ----IWLAPFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGS------AATAF 229 +W+ NL LNI+EF AKTVSLGMRLFGNMYAGEL+FLLIALLGS AT Sbjct: 184 SHPLLWIP--NLALNIVEFVAKTVSLGMRLFGNMYAGELVFLLIALLGSMWSFGGDATFL 241 Query: 230 GFVGHVIAGSIWAIFHILIVLLQAFIFMMLTLVYLGQAHEAH 271 GFVGHVIAGS+WAIFHILIVLLQAFIFMMLTLVYLGQAH+AH Sbjct: 242 GFVGHVIAGSVWAIFHILIVLLQAFIFMMLTLVYLGQAHDAH 283