BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0280.p         (136 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IVM0.1 D8IVM0_HERSS CoA-binding protein                             199   1e-49
A4GAG7.1 A4GAG7_HERAR Putative uncharacterized protein                145   1e-33
C5TBI7.1 C5TBI7_ACIDE CoA-binding domain-containing protein           144   4e-33
D6TNT0.1 D6TNT0_9CHLR CoA-binding domain protein                      138   2e-31
A6T468.1 A6T468_JANMA CoA-binding protein                             137   5e-31

>D8IVM0.1 D8IVM0_HERSS CoA-binding protein
          Length = 153

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/134 (76%), Positives = 119/134 (88%), Gaps = 1/134 (0%)

Query: 4   KPVIAVVGLSNRPDRPSYDVTAYMQREGYRIVAVNPMYAGQQILGEHCYASLTEAAQALA 63
           KP+IAVVGLSNRP+R S+DV AYMQ  GYRIVAVNPMYAGQ ILGEHC+ASL +A+ ALA
Sbjct: 20  KPIIAVVGLSNRPERASFDVAAYMQAAGYRIVAVNPMYAGQTILGEHCHASLVQASAALA 79

Query: 64  GQ-VTISIVDCFRKSADIPPVVDEAIAIGAACVWMQQGIVNDAAAAKAKAAGLTVIMDRC 122
           G+ + I+IVDCFRKSADIPPVV+EAIAIGA CVWMQ  IV++ AAA+A+AAGL VIMD+C
Sbjct: 80  GEGLRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVIMDKC 139

Query: 123 IKVDHAMGISHGVL 136
           IK++HAMG SHGVL
Sbjct: 140 IKIEHAMGQSHGVL 153


>A4GAG7.1 A4GAG7_HERAR Putative uncharacterized protein
          Length = 150

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 1/130 (0%)

Query: 1   MSAKPVIAVVGLSNRPDRPSYDVTAYMQREGYRIVAVNPMYAGQQILGEHCYASLTEAAQ 60
           ++   VIAVVGLS +PDRPS++V AY+QR GYRI+ +NP  AG  ILGEHCYA+LT AA 
Sbjct: 12  LAESRVIAVVGLSPKPDRPSHEVAAYLQRHGYRIIPINPACAGTHILGEHCYATLTLAAA 71

Query: 61  ALAGQVT-ISIVDCFRKSADIPPVVDEAIAIGAACVWMQQGIVNDAAAAKAKAAGLTVIM 119
           ALA Q T I +VD FRKS  + P+VDEAIAI A  VW+Q G++N+ A  KA+AAGL V+ 
Sbjct: 72  ALAEQQTRIDLVDIFRKSELVEPIVDEAIAIRARGVWLQIGVINEVATDKARAAGLDVVA 131

Query: 120 DRCIKVDHAM 129
           DRC K+DHA+
Sbjct: 132 DRCTKIDHAI 141


>C5TBI7.1 C5TBI7_ACIDE CoA-binding domain-containing protein
          Length = 171

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 100/142 (70%), Gaps = 11/142 (7%)

Query: 6   VIAVVGLSNRPDRPSYDVTAYMQREGYRIVAVNPMYA--GQQILGEHCYASLTEAAQALA 63
            IAVVGLS +  RPS+    YMQ  GYRIV VNP+ A  G  ILGE C+ASL EA QA+A
Sbjct: 20  TIAVVGLSPQWHRPSFFAAKYMQAHGYRIVPVNPVVAREGGSILGEPCHASLHEAEQAIA 79

Query: 64  GQV-TISIVDCFRKSADIPPVVDEAIAIGAACVWMQQGIVNDAAAAKAKAAGLTVIMDRC 122
            Q   I +VDCFRKS DIPP+ +EA+AIGA C+W+Q G+V++ AA +A+ AGL VI +RC
Sbjct: 80  RQGGRIDMVDCFRKSEDIPPLAEEAVAIGARCLWLQLGVVHEEAAQRAEDAGLQVIQNRC 139

Query: 123 IKVDHA--------MGISHGVL 136
           +K++HA        MG++ GV+
Sbjct: 140 VKIEHARLFGGLGWMGVNTGVI 161


>D6TNT0.1 D6TNT0_9CHLR CoA-binding domain protein
          Length = 174

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 87/122 (71%), Gaps = 3/122 (2%)

Query: 7   IAVVGLSNRPDRPSYDVTAYMQREGYRIVAVNPMYAGQQILGEHCYASLTEAAQALAGQV 66
           IA+VG+S  P RPS+ V  YMQ EGY I+ +NP YAG+ +LG+  YASL EA +A  G+ 
Sbjct: 29  IAIVGVSADPYRPSHFVAIYMQAEGYDIIPINPRYAGKTLLGKRVYASLKEAREA--GE- 85

Query: 67  TISIVDCFRKSADIPPVVDEAIAIGAACVWMQQGIVNDAAAAKAKAAGLTVIMDRCIKVD 126
           TI IVD FRK AD PP+  EAI IGA  +W+Q G+ ND A   A+AAGLT + DRC+K++
Sbjct: 86  TIEIVDVFRKPADTPPIAREAIEIGARVLWLQLGVRNDEAGEIARAAGLTFVQDRCVKIE 145

Query: 127 HA 128
           HA
Sbjct: 146 HA 147


>A6T468.1 A6T468_JANMA CoA-binding protein
          Length = 150

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 1/129 (0%)

Query: 1   MSAKPVIAVVGLSNRPDRPSYDVTAYMQREGYRIVAVNPMYAGQQILGEHCY-ASLTEAA 59
           ++   VIAVVG+S +PDRPS+ V  Y+Q+ GYRI+ VNP+ AG  ILGEHCY      AA
Sbjct: 12  LAESRVIAVVGISPKPDRPSHYVAEYLQQHGYRIIPVNPVCAGTHILGEHCYATLTQAAA 71

Query: 60  QALAGQVTISIVDCFRKSADIPPVVDEAIAIGAACVWMQQGIVNDAAAAKAKAAGLTVIM 119
                Q+ I +VD FRKS  + P+ DEAIAI A   W+Q GIVN+AA  KA+AAGL  + 
Sbjct: 72  ALAEQQIRIDLVDVFRKSELVEPIADEAIAIKARAFWLQMGIVNEAATNKARAAGLDAVA 131

Query: 120 DRCIKVDHA 128
           DRC KVDHA
Sbjct: 132 DRCTKVDHA 140