BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0250.p         (120 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IZQ0.1 D8IZQ0_HERSS Nitrite reductase NADPH (Small subunit) ox...   177   5e-43
Q8XQK3.1 Q8XQK3_RALSO Probable nitrite reductase nadph (Small su...   171   4e-41
B5SDM7.1 B5SDM7_RALSO Nitrite reductase nadph (Small subunit) pr...   169   9e-41
A3RXN9.1 A3RXN9_RALSO Putative uncharacterized protein                169   9e-41
D8P5E5.1 D8P5E5_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4      169   1e-40

>D8IZQ0.1 D8IZQ0_HERSS Nitrite reductase NADPH (Small subunit) oxidoreductase
           protein EC=1.7.1.4
          Length = 120

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/120 (68%), Positives = 101/120 (84%), Gaps = 2/120 (1%)

Query: 3   MHSDRQIEHWIEVCDIADIVPNTGVCALIGGEQVAVFHVIE--GGNSETRVFAIGNYDPN 60
           MHSD+QI+HW  VC++ +IVPNTGV AL+G +QVAVFHVI+   G  + RVFA+GNYDPN
Sbjct: 1   MHSDQQIKHWTPVCELGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPN 60

Query: 61  ADASVLSRGLVGSIGERIVVASPIYKQHFDLQTGECIEAPEHSVSAYPARLEHGKVWVGA 120
            DA+VLSRGLVG++GERIVVASPIYK HFDL TGEC+E P +S+ A+PAR+  GKVW+GA
Sbjct: 61  CDAAVLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWIGA 120


>Q8XQK3.1 Q8XQK3_RALSO Probable nitrite reductase nadph (Small subunit)
           oxidoreductase protein EC=1.7.1.4
          Length = 113

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/111 (71%), Positives = 94/111 (84%), Gaps = 2/111 (1%)

Query: 8   QIEHWIEVCDIADIVPNTGVCALIGGEQVAVFHVIEGGNSETRVFAIGNYDPNADASVLS 67
           Q  HW  +C + DIVPNTGVCAL+GG Q+AVFHV   G++  RV+AIGNYDPNADA+VLS
Sbjct: 2   QANHWTAICALDDIVPNTGVCALVGGAQIAVFHV--AGDAPRRVYAIGNYDPNADAAVLS 59

Query: 68  RGLVGSIGERIVVASPIYKQHFDLQTGECIEAPEHSVSAYPARLEHGKVWV 118
           RGLVG++GERIVVASPIYKQHFDL TGEC+EAP +SV AY A++E GKVW+
Sbjct: 60  RGLVGNLGERIVVASPIYKQHFDLATGECLEAPANSVPAYAAKVEDGKVWI 110


>B5SDM7.1 B5SDM7_RALSO Nitrite reductase nadph (Small subunit) protein
           EC=1.7.1.4
          Length = 113

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 81/112 (72%), Positives = 93/112 (83%), Gaps = 2/112 (1%)

Query: 8   QIEHWIEVCDIADIVPNTGVCALIGGEQVAVFHVIEGGNSETRVFAIGNYDPNADASVLS 67
           Q  HW  VC + DIVPNTGVCAL+GGEQVAVFHV   G +  RV+AIGNYDPN++A+VLS
Sbjct: 2   QTNHWTAVCALDDIVPNTGVCALVGGEQVAVFHV--AGQAPHRVYAIGNYDPNSEAAVLS 59

Query: 68  RGLVGSIGERIVVASPIYKQHFDLQTGECIEAPEHSVSAYPARLEHGKVWVG 119
           RGLVG++GERIVVASPIYKQHFDL TGEC+EAP  SV AY A++E GKVWV 
Sbjct: 60  RGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVPAYAAKVEDGKVWVA 111


>A3RXN9.1 A3RXN9_RALSO Putative uncharacterized protein
          Length = 113

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 81/112 (72%), Positives = 93/112 (83%), Gaps = 2/112 (1%)

Query: 8   QIEHWIEVCDIADIVPNTGVCALIGGEQVAVFHVIEGGNSETRVFAIGNYDPNADASVLS 67
           Q  HW  VC + DIVPNTGVCAL+GGEQVAVFHV   G +  RV+AIGNYDPN++A+VLS
Sbjct: 2   QTNHWTAVCALDDIVPNTGVCALVGGEQVAVFHV--AGQAPHRVYAIGNYDPNSEAAVLS 59

Query: 68  RGLVGSIGERIVVASPIYKQHFDLQTGECIEAPEHSVSAYPARLEHGKVWVG 119
           RGLVG++GERIVVASPIYKQHFDL TGEC+EAP  SV AY A++E GKVWV 
Sbjct: 60  RGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVPAYAAKVEDGKVWVA 111


>D8P5E5.1 D8P5E5_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4
          Length = 113

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/111 (72%), Positives = 94/111 (84%), Gaps = 2/111 (1%)

Query: 8   QIEHWIEVCDIADIVPNTGVCALIGGEQVAVFHVIEGGNSETRVFAIGNYDPNADASVLS 67
           Q  HW  VC + DIVPNTGVCAL+GGEQVAVFHV   G++  RV+AIGNYDPN++A+VLS
Sbjct: 2   QANHWTAVCALDDIVPNTGVCALVGGEQVAVFHV--AGHAPHRVYAIGNYDPNSEAAVLS 59

Query: 68  RGLVGSIGERIVVASPIYKQHFDLQTGECIEAPEHSVSAYPARLEHGKVWV 118
           RGLVG++GERIVVASPIYKQHFDL TGEC+EAP  SV AY A++E GKVWV
Sbjct: 60  RGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVQAYAAKVEDGKVWV 110