BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0234.p         (107 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IT74.1 D8IT74_HERSS Ribonuclease PH EC=2.7.7.56                     172   1e-41
A2RPY0.1 A2RPY0_HERSE Ribonuclease PH EC=2.7.7.56                     172   1e-41
A6SXM5.1 A6SXM5_JANMA Ribonuclease PH EC=2.7.7.56                     166   8e-40
F1VV10.1 F1VV10_9BURK Ribonuclease PH                                 166   1e-39
A4G6X6.1 A4G6X6_HERAR Ribonuclease PH EC=2.7.7.56                     165   2e-39

>D8IT74.1 D8IT74_HERSS Ribonuclease PH EC=2.7.7.56
          Length = 242

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 93/105 (88%)

Query: 1   MVAAYDAFSVLLGRGLITAIPVKHFVAAISVGVYRGVPVLDLDYVEDSDCDTDMNVVMTD 60
           MVAAYDAF+ L  +GLI AIPVKHFVAAISVGV++GVPVLDLDY EDSDCDTDMNVVMTD
Sbjct: 138 MVAAYDAFAGLKSQGLIEAIPVKHFVAAISVGVFKGVPVLDLDYPEDSDCDTDMNVVMTD 197

Query: 61  AGHFVEVQGTAEGAAFDRNTLNSLLDIADKGIKELLALQKETLGL 105
           AGHFVEVQGTAEGAAFDR TLN+LLD+A +GI  L  LQ++ LGL
Sbjct: 198 AGHFVEVQGTAEGAAFDRATLNALLDLAQQGIATLNGLQRQALGL 242


>A2RPY0.1 A2RPY0_HERSE Ribonuclease PH EC=2.7.7.56
          Length = 242

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 93/105 (88%)

Query: 1   MVAAYDAFSVLLGRGLITAIPVKHFVAAISVGVYRGVPVLDLDYVEDSDCDTDMNVVMTD 60
           MVAAYDAF+ L  +GLI AIPVKHFVAAISVGV++GVPVLDLDY EDSDCDTDMNVVMTD
Sbjct: 138 MVAAYDAFAGLKSQGLIEAIPVKHFVAAISVGVFKGVPVLDLDYPEDSDCDTDMNVVMTD 197

Query: 61  AGHFVEVQGTAEGAAFDRNTLNSLLDIADKGIKELLALQKETLGL 105
           AGHFVEVQGTAEGAAFDR TLN+LLD+A +GI  L  LQ++ LGL
Sbjct: 198 AGHFVEVQGTAEGAAFDRATLNALLDLAQQGIATLNGLQRQALGL 242


>A6SXM5.1 A6SXM5_JANMA Ribonuclease PH EC=2.7.7.56
          Length = 244

 Score =  166 bits (421), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 93/106 (87%)

Query: 1   MVAAYDAFSVLLGRGLITAIPVKHFVAAISVGVYRGVPVLDLDYVEDSDCDTDMNVVMTD 60
           MVAAYDAFS L+ + +I AIP+KHFVAAISVGVY+G PVLDLDY EDSDCDTDMN+VMTD
Sbjct: 138 MVAAYDAFSKLVAQNVIPAIPLKHFVAAISVGVYKGQPVLDLDYDEDSDCDTDMNIVMTD 197

Query: 61  AGHFVEVQGTAEGAAFDRNTLNSLLDIADKGIKELLALQKETLGLA 106
           AGHF+EVQGTAEGAAFDR T++ LLD+A  GI++L+ LQK+ L +A
Sbjct: 198 AGHFIEVQGTAEGAAFDRATMDKLLDLAQDGIRDLIVLQKQALAIA 243


>F1VV10.1 F1VV10_9BURK Ribonuclease PH
          Length = 244

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/105 (74%), Positives = 94/105 (89%)

Query: 1   MVAAYDAFSVLLGRGLITAIPVKHFVAAISVGVYRGVPVLDLDYVEDSDCDTDMNVVMTD 60
           MVAA+DAFS L+  G+++A+P+KHFVAAISVGV++G PVLDLDY EDS CDTDMNVVMTD
Sbjct: 138 MVAAHDAFSKLVDTGVLSAMPLKHFVAAISVGVFQGTPVLDLDYDEDSTCDTDMNVVMTD 197

Query: 61  AGHFVEVQGTAEGAAFDRNTLNSLLDIADKGIKELLALQKETLGL 105
           AGHF+EVQGTAEGAAFDR T+N LLD+AD GI++L+ALQ+  LGL
Sbjct: 198 AGHFIEVQGTAEGAAFDRATMNQLLDLADGGIRDLIALQRRELGL 242


>A4G6X6.1 A4G6X6_HERAR Ribonuclease PH EC=2.7.7.56
          Length = 244

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/106 (72%), Positives = 93/106 (87%)

Query: 1   MVAAYDAFSVLLGRGLITAIPVKHFVAAISVGVYRGVPVLDLDYVEDSDCDTDMNVVMTD 60
           MVAAYDAFS L+ + +I AIP+KHFVAAISVGVY+G PVLDLDY EDSDCDTDMN+VMTD
Sbjct: 138 MVAAYDAFSKLVAQNVIPAIPLKHFVAAISVGVYKGQPVLDLDYDEDSDCDTDMNIVMTD 197

Query: 61  AGHFVEVQGTAEGAAFDRNTLNSLLDIADKGIKELLALQKETLGLA 106
           AGHF+EVQGTAEGAAFDR T++ LLD+A  GI++L+ +QK+ L +A
Sbjct: 198 AGHFIEVQGTAEGAAFDRATMDRLLDLAQDGIRDLIVMQKQALAIA 243