BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0217.p         (117 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IT59.1 D8IT59_HERSS Molybdenum transport regulator protein          171   3e-41
A7L4W9.1 A7L4W9_HERSE ModE2                                           171   3e-41
C6NW66.1 C6NW66_9GAMM Putative uncharacterized protein                123   9e-27
E6Q9Q3.1 E6Q9Q3_9ZZZZ Putative transcriptional regulator, LysR f...   121   3e-26
B7J619.1 B7J619_ACIF2 Helix-turn-helix domain protein                 121   3e-26

>D8IT59.1 D8IT59_HERSS Molybdenum transport regulator protein
          Length = 123

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 97/113 (85%)

Query: 1   MTNSKTVRLRVMQGDTIAFGPGKAALLLAIDRNGSISGAAREMEMSYRRAWLLVEEMNRC 60
           M +SKT+R+RVMQG+TIAFGPGKA LL AI R GSISGAAREMEMSYRRAWLLVEEMNRC
Sbjct: 1   MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60

Query: 61  FNQPLVATATGGAKGGGASITELAREVVACYQRMQKKADAAIEKDMQHLQSLI 113
           F  PLV TATGG++GGGA++T L +EV+  Y+RMQKKA A+I  D++HL +L+
Sbjct: 61  FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLM 113


>A7L4W9.1 A7L4W9_HERSE ModE2
          Length = 123

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 97/113 (85%)

Query: 1   MTNSKTVRLRVMQGDTIAFGPGKAALLLAIDRNGSISGAAREMEMSYRRAWLLVEEMNRC 60
           M +SKT+R+RVMQG+TIAFGPGKA LL AI R GSISGAAREMEMSYRRAWLLVEEMNRC
Sbjct: 1   MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60

Query: 61  FNQPLVATATGGAKGGGASITELAREVVACYQRMQKKADAAIEKDMQHLQSLI 113
           F  PLV TATGG++GGGA++T L +EV+  Y+RMQKKA A+I  D++HL +L+
Sbjct: 61  FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLM 113


>C6NW66.1 C6NW66_9GAMM Putative uncharacterized protein
          Length = 133

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 80/112 (71%)

Query: 2   TNSKTVRLRVMQGDTIAFGPGKAALLLAIDRNGSISGAAREMEMSYRRAWLLVEEMNRCF 61
           ++S   RLR++  + IA GPGKA LL AI  +GSIS AAR M MSYRRAWLLV+ MNR F
Sbjct: 7   SHSNAPRLRILLAEAIAMGPGKAELLRAIREHGSISAAARAMGMSYRRAWLLVDTMNRSF 66

Query: 62  NQPLVATATGGAKGGGASITELAREVVACYQRMQKKADAAIEKDMQHLQSLI 113
            +PLV TATGG++GGGA +T L  +V+  Y  M++KA A +++DM   + L+
Sbjct: 67  IEPLVGTATGGSRGGGARLTPLGMDVLRRYAAMEQKAQAVLQEDMDDFRRLL 118


>E6Q9Q3.1 E6Q9Q3_9ZZZZ Putative transcriptional regulator, LysR family
          Length = 123

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 76/113 (67%)

Query: 1   MTNSKTVRLRVMQGDTIAFGPGKAALLLAIDRNGSISGAAREMEMSYRRAWLLVEEMNRC 60
           MT+    RLRV+  + IA GPGKA LL  I   GSIS AAR M MSYRRAWLLV+ MN C
Sbjct: 1   MTDHLQPRLRVLLAEAIAIGPGKAELLRHIREEGSISAAARAMNMSYRRAWLLVDTMNHC 60

Query: 61  FNQPLVATATGGAKGGGASITELAREVVACYQRMQKKADAAIEKDMQHLQSLI 113
           F  P+V+TATGG+ GGGA +TE+  E++  Y+ M+ KA+  +  D+   + L+
Sbjct: 61  FLAPVVSTATGGSHGGGAHLTEMGEEILTRYEAMEAKANLTLAPDIAEFRKLM 113


>B7J619.1 B7J619_ACIF2 Helix-turn-helix domain protein
          Length = 123

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 76/113 (67%)

Query: 1   MTNSKTVRLRVMQGDTIAFGPGKAALLLAIDRNGSISGAAREMEMSYRRAWLLVEEMNRC 60
           MT+    RLRV+  + IA GPGKA LL  I   GSIS AAR M MSYRRAWLLV+ MN C
Sbjct: 1   MTDHLQPRLRVLLAEAIAIGPGKAELLRHIREEGSISAAARAMNMSYRRAWLLVDTMNHC 60

Query: 61  FNQPLVATATGGAKGGGASITELAREVVACYQRMQKKADAAIEKDMQHLQSLI 113
           F  P+V+TATGG+ GGGA +TE+  E++  Y+ M+ KA+  +  D+   + L+
Sbjct: 61  FLAPVVSTATGGSHGGGAHLTEMGEEILTRYEAMEAKANLTLAPDIAEFRKLM 113