BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0181.p         (186 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1W2L0.1 F1W2L0_9BURK Poly(3-hydroxybutyrate) depolymerase            153   1e-35
B2T9J4.1 B2T9J4_BURPP Esterase, PHB depolymerase family               137   7e-31
B2JQI0.1 B2JQI0_BURP8 Esterase, PHB depolymerase family               135   2e-30
D5NH79.1 D5NH79_9BURK Esterase, PHB depolymerase family               134   8e-30
Q13RZ0.1 Q13RZ0_BURXL Esterase, PHB depolymerase                      132   2e-29

>F1W2L0.1 F1W2L0_9BURK Poly(3-hydroxybutyrate) depolymerase
          Length = 268

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/183 (49%), Positives = 107/183 (58%), Gaps = 9/183 (4%)

Query: 5   SPPAAMAQILALTHPQLIAAVGMHSAPLFGVSRSAVGAYGVMQHGS-TQALAPIDKLLAK 63
           S  AAMA ILAL HPQLIAAVG+HSAP+FG + +A+GAYGVMQ G  T+  A I  +   
Sbjct: 87  SAGAAMAHILALRHPQLIAAVGLHSAPVFGAASTALGAYGVMQRGGLTRVGAAIQAVTDT 146

Query: 64  TPG-FPGMPAILITGDDDKIVRPINQLQLAGQFLRLNHAATQAPLAPLPPVTKDFGRTSK 122
            P  FP MPAILI G  D +VRPIN  QL  QF  LN    Q    P       +    +
Sbjct: 147 GPVPFPAMPAILIQGQQDSVVRPINFHQLEQQFCELNGLTAQQRQEP------TYRAAGR 200

Query: 123 QFPRKNSMTVRDFATGSKVLVRSVHIARLGHAWSGGDDALPFNA-KGPDAGKLMLAFFSR 181
                +     D+  G K L+R   I +L HAWSGGD ALPFN  KGPDA ++M  FF+ 
Sbjct: 201 SARAAHGFNTLDYRVGKKTLLRLCEIHQLKHAWSGGDPALPFNERKGPDASRMMWTFFAP 260

Query: 182 HRR 184
           HRR
Sbjct: 261 HRR 263


>B2T9J4.1 B2T9J4_BURPP Esterase, PHB depolymerase family
          Length = 398

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 102/181 (56%), Gaps = 10/181 (5%)

Query: 5   SPPAAMAQILALTHPQLIAAVGMHSAPLFGVSRSAVGAYGVMQHGSTQALAPIDKLLAKT 64
           S  A +  +LAL HP+  AAV +HS P FG +RS + A  VM+ G+ +  A +    A  
Sbjct: 208 SAGAGLTALLALNHPEHFAAVALHSGPAFGEARSGIMAMDVMRRGARREPAELVDEAADV 267

Query: 65  PGFPGMPAILITGDDDKIVRPINQLQLAGQFLRLNHAATQAPLAPLPPVTKDFGRTSKQF 124
             +PGMPA++I GD D +V P+N  QLA QFLRLN    Q        V +D        
Sbjct: 268 ARYPGMPALIIHGDADHVVSPVNADQLAVQFLRLNRIVDQNGARKSGEVRED-------- 319

Query: 125 PRKNSMTVRDFATGSKVLVRSVHIARLGHAWSGGDDALPFN-AKGPDAGKLMLAFFSRHR 183
            RK  + +RD+  G + +VR   +  L HAWSGGDDA+PF+ AKGPDA  ++  FF   R
Sbjct: 320 -RKGGVVMRDYLRGGRRVVRLCRVQGLAHAWSGGDDAVPFHSAKGPDASAMLWEFFKHQR 378

Query: 184 R 184
           R
Sbjct: 379 R 379


>B2JQI0.1 B2JQI0_BURP8 Esterase, PHB depolymerase family
          Length = 398

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 10/183 (5%)

Query: 5   SPPAAMAQILALTHPQLIAAVGMHSAPLFGVSRSAVGAYGVMQHGSTQALAPIDKLLAKT 64
           S  A +  +LAL  P+  AAV +HS P FG + S + A  VM+ G+ Q    +   +A  
Sbjct: 208 SAGAGLTSLLALHFPEHFAAVALHSGPAFGEAHSGITAMDVMRRGTRQDPVALVDAVADV 267

Query: 65  PGFPGMPAILITGDDDKIVRPINQLQLAGQFLRLNHAATQAPLAPLPPVTKDFGRTSKQF 124
             +PGMPAI++ G+ D++V P+N  QL  QFLRLN       +  +  V +D        
Sbjct: 268 TAYPGMPAIILQGEADRVVAPVNAEQLTEQFLRLNGIVDAQGVRKVGDVKED-------- 319

Query: 125 PRKNSMTVRDFATGSKVLVRSVHIARLGHAWSGGDDALPFN-AKGPDAGKLMLAFFSRHR 183
            RK ++T RD+  G + +VR   +  LGHAWSGGDDA+PF+ +KGPDA  L+  FF   R
Sbjct: 320 -RKATVTTRDYTRGGRRIVRLCRVHGLGHAWSGGDDAVPFHSSKGPDASSLLWDFFRHQR 378

Query: 184 RKQ 186
           R +
Sbjct: 379 RAE 381


>D5NH79.1 D5NH79_9BURK Esterase, PHB depolymerase family
          Length = 398

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 104/182 (57%), Gaps = 11/182 (6%)

Query: 5   SPPAAMAQILALTHPQLIAAVGMHSAPLFGVSRSAVGAYGVMQHGSTQALAPIDKLLAKT 64
           S  A +  +LA+ +P+  AAV +HS P FG + S + A  VM+ G+ +  A +    A  
Sbjct: 208 SAGAGLTALLAVKYPEHFAAVALHSGPAFGEAHSGITAMDVMRRGARREPAELVDEAANV 267

Query: 65  PGFPGMPAILITGDDDKIVRPINQLQLAGQFLRLNHAATQAPLAPLPPVTKDFGRTSKQF 124
             +PGMPAI+I GD D +V P+N  QLA QFLRLN    +        V ++        
Sbjct: 268 ANYPGMPAIIIHGDADHVVAPVNADQLAVQFLRLNRIVDETGARKSGEVREE-------- 319

Query: 125 PRKNSMTVRDFATGSKVLVRSVHIARLGHAWSGGDDALPFN-AKGPDAGKLMLAFFSRHR 183
            RK  + +RD+  G + +VR   +  L HAWSGGDDA+PF+ AKGPDA  +M  FF RH+
Sbjct: 320 -RKGGVVMRDYVRGGRRIVRLCRVQGLAHAWSGGDDAVPFHSAKGPDASAMMWEFF-RHQ 377

Query: 184 RK 185
           R+
Sbjct: 378 RR 379


>Q13RZ0.1 Q13RZ0_BURXL Esterase, PHB depolymerase
          Length = 398

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 104/182 (57%), Gaps = 11/182 (6%)

Query: 5   SPPAAMAQILALTHPQLIAAVGMHSAPLFGVSRSAVGAYGVMQHGSTQALAPIDKLLAKT 64
           S  A +  +LA+ +P+  AAV +HS P FG + S + A  VM+ G+ +  A +    A  
Sbjct: 208 SAGAGLTALLAVKYPEHFAAVALHSGPAFGEAHSGITAMDVMRRGTRREPAELVDETADV 267

Query: 65  PGFPGMPAILITGDDDKIVRPINQLQLAGQFLRLNHAATQAPLAPLPPVTKDFGRTSKQF 124
             +PGMPAI+I GD D +V PIN  QLA QFLRLN    +        V ++        
Sbjct: 268 ANYPGMPAIIIHGDADHVVAPINADQLAVQFLRLNRIVDETGARKAGEVREE-------- 319

Query: 125 PRKNSMTVRDFATGSKVLVRSVHIARLGHAWSGGDDALPFN-AKGPDAGKLMLAFFSRHR 183
            RK  + +RD+  G + +VR   +  L HAWSGGDDA+PF+ AKGPDA  ++  FF RH+
Sbjct: 320 -RKGGVVMRDYVRGGRRIVRLCRVQGLAHAWSGGDDAVPFHSAKGPDASGMVWEFF-RHQ 377

Query: 184 RK 185
           R+
Sbjct: 378 RR 379