BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0156.p         (245 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYT7.1 D8IYT7_HERSS ABC-type lipoprotein release transport sys...   382   e-104
A4G771.1 A4G771_HERAR Lipoprotein releasing system ATP-binding p...   365   3e-99
A6SXF9.1 A6SXF9_JANMA ABC-type transport system, involved in lip...   364   5e-99
F1VWT5.1 F1VWT5_9BURK Lipoprotein releasing system ATP-binding p...   354   6e-96
C3X9M8.1 C3X9M8_OXAFO Lipoprotein releasing system ATP-binding p...   333   2e-89

>D8IYT7.1 D8IYT7_HERSS ABC-type lipoprotein release transport system, ATPase
           component protein
          Length = 236

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/228 (83%), Positives = 206/228 (90%)

Query: 13  NNMNQHDQAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLL 72
           N+  ++ QAVL+ RGLGKTF QGKYSVKVL  VDIDV  GEQVAIVG SGSGKSTLLHLL
Sbjct: 2   NDPLKNRQAVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLL 61

Query: 73  GGLDTPSAGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIR 132
           GGLDTPS+G+V+L+GKDFA+LGE+ RG LRN +LGFVYQFHHLLPEFSALDNVAMPLMIR
Sbjct: 62  GGLDTPSSGTVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIR 121

Query: 133 RVKRDQAQEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGN 192
           RVKR  AQEQAR +L +VGL  RV HVPGELSGGERQRVALARALVT+PACVLADEPTGN
Sbjct: 122 RVKRADAQEQAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPACVLADEPTGN 181

Query: 193 LDRSTADKTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGL 240
           LDRSTAD+TFELMIELS+TLGTAFVIVTHDIELA RCGRVLRLSE GL
Sbjct: 182 LDRSTADRTFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGL 229


>A4G771.1 A4G771_HERAR Lipoprotein releasing system ATP-binding protein LolD
           EC=3.6.3.-
          Length = 228

 Score =  365 bits (937), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 179/229 (78%), Positives = 200/229 (87%), Gaps = 3/229 (1%)

Query: 15  MNQHDQAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGG 74
           M++H   VL+CR L KTF QGKY+V VL G+++D+  GE+VAIVG SGSGKSTLLHLLGG
Sbjct: 1   MSEH---VLACRDLAKTFTQGKYAVDVLKGINLDIVKGERVAIVGASGSGKSTLLHLLGG 57

Query: 75  LDTPSAGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRV 134
           LDTPSAGSVTL+ +DFA+L E  RG+LRN +LGFVYQFHHLLPEFSALDNVAMPLMIRRV
Sbjct: 58  LDTPSAGSVTLLHQDFASLDEKTRGNLRNRSLGFVYQFHHLLPEFSALDNVAMPLMIRRV 117

Query: 135 KRDQAQEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLD 194
            R+QA E AR ILARVGLE+RV HVPGELSGGERQRVALARALVT PACVLADEPTGNLD
Sbjct: 118 PREQAHETARAILARVGLEHRVTHVPGELSGGERQRVALARALVTQPACVLADEPTGNLD 177

Query: 195 RSTADKTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGLLPY 243
           R TA KTF+LM+ELS+TLGTAFVIVTHDIELA  C R+LRLS+ GL PY
Sbjct: 178 RHTAHKTFDLMLELSRTLGTAFVIVTHDIELATHCDRILRLSDEGLQPY 226


>A6SXF9.1 A6SXF9_JANMA ABC-type transport system, involved in lipoprotein
           release, ATPase component
          Length = 228

 Score =  364 bits (935), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 177/229 (77%), Positives = 199/229 (86%), Gaps = 3/229 (1%)

Query: 15  MNQHDQAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGG 74
           M++H   VL+CR L KTF QGKYSV VL  V++D+  GE+VAIVG SGSGKSTLLHLLGG
Sbjct: 1   MSEH---VLACRNLAKTFTQGKYSVNVLKDVNLDIVKGERVAIVGASGSGKSTLLHLLGG 57

Query: 75  LDTPSAGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRV 134
           LDTPSAGSVTL+ +DFA L E  RGDLRN +LGFVYQFHHLLPEFSALDNVAMPLMIRRV
Sbjct: 58  LDTPSAGSVTLLNQDFATLDEKKRGDLRNKSLGFVYQFHHLLPEFSALDNVAMPLMIRRV 117

Query: 135 KRDQAQEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLD 194
            R +A E+AR ILARVGLE+RV HVPGELSGGERQRVALARALVT PACVLADEPTGNLD
Sbjct: 118 PRSEAHEKARAILARVGLEHRVTHVPGELSGGERQRVALARALVTQPACVLADEPTGNLD 177

Query: 195 RSTADKTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGLLPY 243
           R TA KTF+LM+ELS+TLGTAF+IVTHD+ELA  C R++RLS++GL PY
Sbjct: 178 RVTAHKTFDLMLELSRTLGTAFIIVTHDVELATHCDRIMRLSDDGLHPY 226


>F1VWT5.1 F1VWT5_9BURK Lipoprotein releasing system ATP-binding protein LolD
          Length = 218

 Score =  354 bits (909), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 171/217 (78%), Positives = 192/217 (88%)

Query: 28  LGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDTPSAGSVTLMG 87
           +GKTF QGKY+VKVL G+D  V+ GE+VAIVG SGSGKSTLLHLLGGLDTPS GSVTL+G
Sbjct: 1   MGKTFTQGKYAVKVLAGIDFQVQKGERVAIVGASGSGKSTLLHLLGGLDTPSTGSVTLLG 60

Query: 88  KDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRDQAQEQARTIL 147
           ++ A++GE  RGD+RN +LGFVYQFHHLLPEFSALDNVAMPLMIRRV R  AQE AR +L
Sbjct: 61  REMASMGEKERGDVRNHSLGFVYQFHHLLPEFSALDNVAMPLMIRRVDRATAQEAARKVL 120

Query: 148 ARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRSTADKTFELMIE 207
           ARVGL  RV HVPGELSGGERQRVALARALVT PACVLADEPTGNLDR+TA +TF+LM+E
Sbjct: 121 ARVGLAERVTHVPGELSGGERQRVALARALVTLPACVLADEPTGNLDRATAHQTFDLMLE 180

Query: 208 LSQTLGTAFVIVTHDIELARRCGRVLRLSENGLLPYV 244
           LS+TLGT+FVIVTHD+ELAR C R+LRLSE GL PYV
Sbjct: 181 LSRTLGTSFVIVTHDVELARHCDRILRLSERGLEPYV 217


>C3X9M8.1 C3X9M8_OXAFO Lipoprotein releasing system ATP-binding protein lolD
          Length = 228

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/221 (73%), Positives = 182/221 (82%)

Query: 20  QAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDTPS 79
           + VLSC GL KTF QG Y+V+VL  VD +V+ GE+VAIVG SGSGKST LHLLGGLDTPS
Sbjct: 3   EIVLSCNGLSKTFRQGDYAVEVLKDVDFEVREGERVAIVGASGSGKSTFLHLLGGLDTPS 62

Query: 80  AGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRDQA 139
            GSVTL GK F  L E+ RG+LRN  LGFVYQFHHLLPEFSALDNVAMPLMIRR KR++A
Sbjct: 63  TGSVTLQGKQFDTLSESERGNLRNRVLGFVYQFHHLLPEFSALDNVAMPLMIRREKRERA 122

Query: 140 QEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRSTAD 199
            E A  IL RVGL  RV HVPGELSGGERQRVALARALVT+PACVLADEPTGNLD STA 
Sbjct: 123 HEAAMEILTRVGLAERVSHVPGELSGGERQRVALARALVTHPACVLADEPTGNLDGSTAQ 182

Query: 200 KTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGL 240
           + F++M++LS TL TAFVIVTHD+ELA RC R+ R+SE  L
Sbjct: 183 QIFDMMLDLSTTLKTAFVIVTHDMELAGRCDRIYRMSEKSL 223