BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0155.p         (225 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYT8.1 D8IYT8_HERSS ABC-type lipoprotein release transport sys...   416   e-115
A6SXF8.1 A6SXF8_JANMA ABC-type transport system, involved in lip...   364   4e-99
A4G772.1 A4G772_HERAR Lipoprotein-releasing system transmembrane...   362   2e-98
F1VWT6.1 F1VWT6_9BURK Lipoprotein releasing system transmembrane...   362   2e-98
A3RW94.1 A3RW94_RALSO LolC                                            347   8e-94

>D8IYT8.1 D8IYT8_HERSS ABC-type lipoprotein release transport system,
           permease component protein
          Length = 421

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/224 (90%), Positives = 215/224 (95%)

Query: 2   GIFEAGHYEFDSSLAFIQIEDAERLFRLDAPSGVRLRIKDMLQAPQVTQELSTQLTGNLY 61
           GIFEAGHYEFDSSLAFI ++DAE LFR+DAP+GVRLRI+DMLQAPQVTQEL+  LTG+LY
Sbjct: 198 GIFEAGHYEFDSSLAFIDLQDAETLFRMDAPTGVRLRIRDMLQAPQVTQELARTLTGDLY 257

Query: 62  LRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLGA 121
           LRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLGA
Sbjct: 258 LRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLGA 317

Query: 122 SPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHVQFLPKSIYVISE 181
           SPGSIMKIFVIQGALVGLIGT +GV  GV+VALNIDV+VPAIERL HVQFLPKSIYVISE
Sbjct: 318 SPGSIMKIFVIQGALVGLIGTGIGVGLGVLVALNIDVVVPAIERLFHVQFLPKSIYVISE 377

Query: 182 LPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 225
           LPSDLIWSDV+TIG VAVVLAFLATLYPSW+AARVKPAEALRYE
Sbjct: 378 LPSDLIWSDVYTIGGVAVVLAFLATLYPSWSAARVKPAEALRYE 421


>A6SXF8.1 A6SXF8_JANMA ABC-type transport system, involved in lipoprotein
           release, permease component
          Length = 421

 Score =  364 bits (935), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 204/225 (90%)

Query: 1   VGIFEAGHYEFDSSLAFIQIEDAERLFRLDAPSGVRLRIKDMLQAPQVTQELSTQLTGNL 60
           VGIF++GH+E+DS+LAFI I DA  +F+L APSG+RL+I DM +APQV  +L+  ++GN+
Sbjct: 197 VGIFDSGHFEYDSTLAFIHINDAMTMFKLPAPSGLRLKIADMQRAPQVAMDLTQVISGNV 256

Query: 61  YLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 120
            +RDWS+QN NWFAAV+TEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG
Sbjct: 257 LIRDWSRQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 316

Query: 121 ASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHVQFLPKSIYVIS 180
           ASP SIMKIF+IQGALVGLIGTALGV  GV++A NIDVIVP IERLLHVQFLPK IY+IS
Sbjct: 317 ASPRSIMKIFMIQGALVGLIGTALGVGGGVLIASNIDVIVPFIERLLHVQFLPKDIYLIS 376

Query: 181 ELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 225
           ELPSDL W+DVWTIG+VAVVL+F+ATLYPSW AARVKPAEALRYE
Sbjct: 377 ELPSDLRWNDVWTIGSVAVVLSFVATLYPSWWAARVKPAEALRYE 421


>A4G772.1 A4G772_HERAR Lipoprotein-releasing system transmembrane protein
           LolC
          Length = 421

 Score =  362 bits (930), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 203/225 (90%)

Query: 1   VGIFEAGHYEFDSSLAFIQIEDAERLFRLDAPSGVRLRIKDMLQAPQVTQELSTQLTGNL 60
           VGIF++GH+E+DS+LAFI I+DA  +F+L APSG+RL+I+DM +APQV  +LS  L+G++
Sbjct: 197 VGIFDSGHFEYDSTLAFIHIDDAMTMFKLGAPSGLRLKIEDMQRAPQVALDLSRTLSGDV 256

Query: 61  YLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 120
            +RDWS+QN NWFAAV+TEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG
Sbjct: 257 LIRDWSKQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 316

Query: 121 ASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHVQFLPKSIYVIS 180
           ASPGSIMKIF+IQGALVGLIGTA+GV  GV++A NIDVIVP IER+L VQFLPK IY+IS
Sbjct: 317 ASPGSIMKIFMIQGALVGLIGTAIGVGGGVLIAANIDVIVPFIERILGVQFLPKDIYLIS 376

Query: 181 ELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 225
            LPSDL W DVWTIG VAVVLAFLATLYPSW AARVKPAEALRYE
Sbjct: 377 SLPSDLRWPDVWTIGGVAVVLAFLATLYPSWWAARVKPAEALRYE 421


>F1VWT6.1 F1VWT6_9BURK Lipoprotein releasing system transmembrane protein
           LolC
          Length = 421

 Score =  362 bits (929), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 179/225 (79%), Positives = 203/225 (90%)

Query: 1   VGIFEAGHYEFDSSLAFIQIEDAERLFRLDAPSGVRLRIKDMLQAPQVTQELSTQLTGNL 60
           VGIFEAGHYE+DS+LAF+ I+DAE++FRL+AP+GVRLRI DM +AP V ++LS  +TGN+
Sbjct: 197 VGIFEAGHYEYDSTLAFMHIDDAEKMFRLNAPTGVRLRIDDMQRAPLVARDLSRIMTGNV 256

Query: 61  YLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 120
            + DWS+QN  WFAAV+TEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG
Sbjct: 257 LISDWSKQNKTWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 316

Query: 121 ASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHVQFLPKSIYVIS 180
           ASP SIMKIF+IQGALVGLIGTA+GV+ GV++ALN+DVIVP IE LL VQFLP+ IY+IS
Sbjct: 317 ASPRSIMKIFMIQGALVGLIGTAIGVSAGVLIALNVDVIVPVIEHLLGVQFLPRDIYLIS 376

Query: 181 ELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 225
            LPSDL W DV TIGAVAVVLAFLATLYPSW AARVKPAEALRYE
Sbjct: 377 ALPSDLRWPDVGTIGAVAVVLAFLATLYPSWWAARVKPAEALRYE 421


>A3RW94.1 A3RW94_RALSO LolC
          Length = 823

 Score =  347 bits (890), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 167/225 (74%), Positives = 193/225 (85%)

Query: 1   VGIFEAGHYEFDSSLAFIQIEDAERLFRLDAPSGVRLRIKDMLQAPQVTQELSTQLTGNL 60
           +G FE+GHYEFDSSLA I I+DAERLFRLD P+GVRL++ DM +APQV + LS  LTG L
Sbjct: 599 IGTFESGHYEFDSSLALIHIDDAERLFRLDGPTGVRLKLVDMQRAPQVAEALSRTLTGEL 658

Query: 61  YLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLG 120
           Y+RDWS+QN NWFAAV+TEK+MMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRT+G
Sbjct: 659 YIRDWSRQNKNWFAAVQTEKKMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTMG 718

Query: 121 ASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHVQFLPKSIYVIS 180
           A PGSIMKIF++QG  +G IGT LGV FG ++A NIDVIVPAIE +L VQFLP+SIY IS
Sbjct: 719 AQPGSIMKIFIVQGVAIGFIGTLLGVLFGTLIAYNIDVIVPAIEHVLGVQFLPQSIYFIS 778

Query: 181 ELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 225
           ELPSD   +D+ TIG ++ VLA +ATLYPSW A+RV PAEALRYE
Sbjct: 779 ELPSDPRVNDIATIGIISFVLASVATLYPSWHASRVNPAEALRYE 823