BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0147.p (416 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D5WIU4.1 D5WIU4_BURSC Acyl-CoA dehydrogenase type 2 domain protein 405 e-111 B2U7I4.1 B2U7I4_RALPJ Acyl-CoA dehydrogenase type 2 domain 404 e-110 D5N806.1 D5N806_9BURK Acyl-CoA dehydrogenase type 2 domain 401 e-109 B1G9Y3.1 B1G9Y3_9BURK Acyl-CoA dehydrogenase type 2 domain 400 e-109 E1TDZ9.1 E1TDZ9_BURSG Acyl-CoA dehydrogenase type 2 domain protein 399 e-109 >D5WIU4.1 D5WIU4_BURSC Acyl-CoA dehydrogenase type 2 domain protein Length = 399 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/368 (56%), Positives = 262/368 (71%), Gaps = 7/368 (1%) Query: 52 ERDKAGGHAAAQKELLRQHGLLLLAVPKEYGGIGASWSETFAIVRRIARVDRX-AHLLAF 110 +RD+ GGHAA QK+ + LL LAVP+E+GG GA WS + +VR +ARVD AHL F Sbjct: 36 QRDREGGHAAQQKQWIADADLLTLAVPREFGGAGARWSAIYDVVRELARVDSALAHLFGF 95 Query: 111 QTLQLSGVISYGSDRQRQLYLGETVALNHWWGNSANPADPRLVATE-HDGGLVLQGIKGF 169 LQ+ + +G+ RQR+ YL TV WWGN+ NP D RLVAT HDGG +L G KGF Sbjct: 96 TCLQVVSIDLWGNPRQREKYLRGTVEHRWWWGNAVNPLDARLVATSTHDGGYLLDGQKGF 155 Query: 170 CSGTRGSHRLLTTAIHQPS-GKLLIAVLPTAREGISIHDDWDPIGQRQTDSTSVSYEQVR 228 CSGTRGS +++T + H PS GK + A +PT REGI++HDDWDPIGQRQTDS SVS+ +VR Sbjct: 156 CSGTRGS-QMMTVSAHDPSTGKPVFAAVPTTREGITVHDDWDPIGQRQTDSGSVSFARVR 214 Query: 229 LEWSEVLHRPDGVSTPFLTMRGVVAQLILVNLYLGMAEGAFEQARDYTLNQGRPWFASGV 288 +E EVL RPD TP ++R +++Q +L NL++G+A+GA E+AR Y GRPW ASGV Sbjct: 215 VEPHEVLQRPD---TPHASLRTLISQQVLTNLFVGIAQGALEEARAYVHEHGRPWIASGV 271 Query: 289 QRAADDPYVIHRYAEMHLKLRAARALTDEAGAEVDRAWGIGRELTGEQRGRAALAVAEAK 348 +A DDPY+I R+ EMH++ +A AL A +D AW L E R R ALA +EAK Sbjct: 272 AKATDDPYLIQRFGEMHIQTVSAAALAARAANALDEAWQQRATLDAESRARVALATSEAK 331 Query: 349 ILAHRAALAVGEDVFDVCGARATKAELGLDRFWRNARTHTLHDPIDYKLRDVGRYALEHL 408 I+AHRAAL +GE +FD CGARAT A L LDRFWRNAR HTLHDP+DY++RDVGRYAL Sbjct: 332 IVAHRAALDIGEKLFDACGARATHAPLALDRFWRNARVHTLHDPLDYRVRDVGRYALSGT 391 Query: 409 LPEPTLYS 416 LP+ +LY+ Sbjct: 392 LPDVSLYT 399 >B2U7I4.1 B2U7I4_RALPJ Acyl-CoA dehydrogenase type 2 domain Length = 390 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/365 (55%), Positives = 255/365 (69%), Gaps = 1/365 (0%) Query: 52 ERDKAGGHAAAQKELLRQHGLLLLAVPKEYGGIGASWSETFAIVRRIARVDRX-AHLLAF 110 +RD+ GGHAA +K + + GLL L +P +YGG G W + FA VR IA VD HLLAF Sbjct: 25 QRDQQGGHAAHEKAAISRAGLLPLVIPTQYGGTGVGWEDAFATVRAIAAVDSSLGHLLAF 84 Query: 111 QTLQLSGVISYGSDRQRQLYLGETVALNHWWGNSANPADPRLVATEHDGGLVLQGIKGFC 170 Q LQ + V YGSD QR+ +L T L WWGN+ NP D RL A G +L G KGFC Sbjct: 85 QYLQTATVYLYGSDAQRERFLRPTAELGWWWGNAVNPLDHRLRAQRSGSGWLLDGEKGFC 144 Query: 171 SGTRGSHRLLTTAIHQPSGKLLIAVLPTAREGISIHDDWDPIGQRQTDSTSVSYEQVRLE 230 SGT GS ++ +A SG ++AV+PTAR GI++ DDW PIGQRQTDS SV + V++ Sbjct: 145 SGTLGSDVMVVSAHDAASGNPVVAVVPTARYGITVRDDWHPIGQRQTDSASVQFRHVQVS 204 Query: 231 WSEVLHRPDGVSTPFLTMRGVVAQLILVNLYLGMAEGAFEQARDYTLNQGRPWFASGVQR 290 EVL RP+ V TP+ T+R +AQ +LVNLY G+A GA ++AR +TL RPW SGV+R Sbjct: 205 EDEVLVRPEVVLTPYQTVRSCIAQNVLVNLYTGIAAGALDEARKHTLQSSRPWITSGVER 264 Query: 291 AADDPYVIHRYAEMHLKLRAARALTDEAGAEVDRAWGIGRELTGEQRGRAALAVAEAKIL 350 AADDPY IHR+ EM ++L AA AL D A +DRAW G L+ ++R +LA AEAK+L Sbjct: 265 AADDPYQIHRFGEMRVQLLAAEALADRAIQRLDRAWRKGAALSADERAEVSLATAEAKVL 324 Query: 351 AHRAALAVGEDVFDVCGARATKAELGLDRFWRNARTHTLHDPIDYKLRDVGRYALEHLLP 410 AHRAAL V +++F+ GAR+TKA L LDRFWRNARTHTLHDP+DYKLR +GRYALE +LP Sbjct: 325 AHRAALFVAQELFEATGARSTKAALALDRFWRNARTHTLHDPLDYKLRAIGRYALEGILP 384 Query: 411 EPTLY 415 + T+Y Sbjct: 385 DATIY 389 >D5N806.1 D5N806_9BURK Acyl-CoA dehydrogenase type 2 domain Length = 400 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 202/380 (53%), Positives = 264/380 (69%), Gaps = 5/380 (1%) Query: 39 LPAIEQELARTAAERDKAGGHAAAQKELLRQHGLLLLAVPKEYGGIGASWSETFAIVRRI 98 L ++ L +AA+RD GGHAA +K+ + GLL LAVP+E+GG+GA W + + VR+I Sbjct: 24 LASLLDALHASAAQRDLEGGHAAQEKQWIADAGLLTLAVPREFGGLGARWPDIYETVRKI 83 Query: 99 ARVDRX-AHLLAFQTLQLSGVISYGSDRQRQLYLGETVALNHWWGNSANPADPRLVATEH 157 A+VD AHLL F LQL V +G+ QR YL TV WWGN+ NP D RL+AT Sbjct: 84 AQVDSALAHLLGFTCLQLVSVNVWGNPEQRARYLSGTVENRWWWGNAVNPLDTRLIATAS 143 Query: 158 -DGGLVLQGIKGFCSGTRGSHRLLTTAIHQPSGKLLIAVLPTAREGISIHDDWDPIGQRQ 216 DGG +L G KGFCSGTRGS + +A +GK + V+PT REGI++H+DW+PIGQRQ Sbjct: 144 GDGGYLLDGQKGFCSGTRGSQMMTVSAQDPVTGKPVFGVVPTTREGITVHEDWNPIGQRQ 203 Query: 217 TDSTSVSYEQVRLEWSEVLHRPDGVSTPFLTMRGVVAQLILVNLYLGMAEGAFEQARDYT 276 TDS SVS+ +V+LE EV+ RPD TP ++R +++QL+L NL++G+A+GA ++AR Y Sbjct: 204 TDSGSVSFVRVKLEPQEVMERPD---TPHASLRTLISQLVLTNLFVGIAQGALDEARAYV 260 Query: 277 LNQGRPWFASGVQRAADDPYVIHRYAEMHLKLRAARALTDEAGAEVDRAWGIGRELTGEQ 336 G+PW SGV +A DDPY+I R+ EM L+ +A AL A ++ AW G L+ E Sbjct: 261 TRHGKPWIYSGVDKATDDPYLIQRFGEMRLQAVSAEALATRAAWLLEDAWQQGAALSPET 320 Query: 337 RGRAALAVAEAKILAHRAALAVGEDVFDVCGARATKAELGLDRFWRNARTHTLHDPIDYK 396 R + ALA +EAKI+AHRAAL V E +FD CGARAT A L LDRFWRNAR HTLHDP+DY+ Sbjct: 321 RAQVALATSEAKIVAHRAALDVSEQLFDACGARATHAPLALDRFWRNARVHTLHDPLDYR 380 Query: 397 LRDVGRYALEHLLPEPTLYS 416 +RDVGRYAL LPE +LY+ Sbjct: 381 VRDVGRYALTGALPEVSLYT 400 >B1G9Y3.1 B1G9Y3_9BURK Acyl-CoA dehydrogenase type 2 domain Length = 400 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/370 (53%), Positives = 259/370 (70%), Gaps = 5/370 (1%) Query: 49 TAAERDKAGGHAAAQKELLRQHGLLLLAVPKEYGGIGASWSETFAIVRRIARVDRX-AHL 107 +AA+RD AGGHAA +K+ + GLL LAVP+E+GG GASW + ++R+IA+VD AHL Sbjct: 34 SAAQRDLAGGHAAQEKQWIADAGLLTLAVPREFGGEGASWPHIYQVIRKIAQVDSALAHL 93 Query: 108 LAFQTLQLSGVISYGSDRQRQLYLGETVALNHWWGNSANPADPRLVATEH-DGGLVLQGI 166 L F LQ + +G+ QR YL TV WWGN+ NP D RLVA+ DGG +L G Sbjct: 94 LGFTFLQEVSINVWGNAEQRARYLSGTVKERWWWGNAVNPLDTRLVASATIDGGYLLNGQ 153 Query: 167 KGFCSGTRGSHRLLTTAIHQPSGKLLIAVLPTAREGISIHDDWDPIGQRQTDSTSVSYEQ 226 KGFCSGTRGS + +A +G + AV+PT REGI++++DW+PIGQRQTDS SVS+ Q Sbjct: 154 KGFCSGTRGSQMMTVSAQDPLTGNSVFAVVPTTREGITVNEDWNPIGQRQTDSGSVSFAQ 213 Query: 227 VRLEWSEVLHRPDGVSTPFLTMRGVVAQLILVNLYLGMAEGAFEQARDYTLNQGRPWFAS 286 VR+E EVLHR D TP+ ++R +V+Q ++ NL++G+A+GA ++AR Y G+PW S Sbjct: 214 VRVEPDEVLHRAD---TPYASLRTLVSQQVMTNLFVGIAQGALDEARAYVTQYGKPWLTS 270 Query: 287 GVQRAADDPYVIHRYAEMHLKLRAARALTDEAGAEVDRAWGIGRELTGEQRGRAALAVAE 346 GV +A DDPY+I R+ EM ++ +A AL + A +D AW G L+ E R ALA +E Sbjct: 271 GVAKATDDPYLIQRFGEMRIQAVSAEALAERAAQALDAAWREGPSLSAEARAHVALATSE 330 Query: 347 AKILAHRAALAVGEDVFDVCGARATKAELGLDRFWRNARTHTLHDPIDYKLRDVGRYALE 406 AKI+AHRAAL V E +FD CGARAT L LDRFWRNAR HTLHDP+DY++RDVGRYAL Sbjct: 331 AKIVAHRAALDVSEKLFDACGARATHGPLALDRFWRNARVHTLHDPLDYRVRDVGRYALS 390 Query: 407 HLLPEPTLYS 416 LPE +LY+ Sbjct: 391 GTLPEVSLYT 400 >E1TDZ9.1 E1TDZ9_BURSG Acyl-CoA dehydrogenase type 2 domain protein Length = 400 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/367 (53%), Positives = 256/367 (69%), Gaps = 5/367 (1%) Query: 52 ERDKAGGHAAAQKELLRQHGLLLLAVPKEYGGIGASWSETFAIVRRIARVDRX-AHLLAF 110 +RD+AGGHAA +K+ + + GLL LA+P+E+GG GA W E + ++R+IA+VD AHLL F Sbjct: 37 QRDQAGGHAAQEKQWIAEAGLLTLAIPREFGGEGAPWPEIYEVIRKIAQVDSALAHLLGF 96 Query: 111 QTLQLSGVISYGSDRQRQLYLGETVALNHWWGNSANPADPRLVATEH-DGGLVLQGIKGF 169 LQ + +G+ QR+ YL TV WWGN+ NP D RLVAT DGG VL G KGF Sbjct: 97 TFLQEVSIYVWGNAAQRERYLRGTVKERWWWGNAVNPLDARLVATATGDGGYVLNGQKGF 156 Query: 170 CSGTRGSHRLLTTAIHQPSGKLLIAVLPTAREGISIHDDWDPIGQRQTDSTSVSYEQVRL 229 CSGTRGS + +A S L AV+PTAR GI+++DDW+PIGQRQTDS SVS+ QVR+ Sbjct: 157 CSGTRGSQMMTVSAQDPQSRTTLFAVVPTARAGITVNDDWNPIGQRQTDSGSVSFAQVRV 216 Query: 230 EWSEVLHRPDGVSTPFLTMRGVVAQLILVNLYLGMAEGAFEQARDYTLNQGRPWFASGVQ 289 E EVL R D TP+ ++R +V+Q ++ NL++G+A+GA E+AR Y G+PW SGV Sbjct: 217 EPDEVLDRAD---TPYASLRTLVSQQVMTNLFVGIAQGALEEARAYVTQYGKPWLTSGVA 273 Query: 290 RAADDPYVIHRYAEMHLKLRAARALTDEAGAEVDRAWGIGRELTGEQRGRAALAVAEAKI 349 +A DDPY+I R+ EM ++ +A AL A +D AW G L+ + R ALA +EAKI Sbjct: 274 KATDDPYLIQRFGEMRIQAVSAEALAVRAAQALDAAWREGPSLSAQARAHVALATSEAKI 333 Query: 350 LAHRAALAVGEDVFDVCGARATKAELGLDRFWRNARTHTLHDPIDYKLRDVGRYALEHLL 409 +AHRAAL V E +FD CGARAT L LDRFWRNAR HTLHDP+DY++RDVGRYAL L Sbjct: 334 VAHRAALDVSEKLFDACGARATHGPLALDRFWRNARVHTLHDPLDYRIRDVGRYALNGTL 393 Query: 410 PEPTLYS 416 PE +LY+ Sbjct: 394 PEVSLYT 400