BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0141.p (209 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYU7.1 D8IYU7_HERSS Transmembrane protein 194 5e-48 A4G779.1 A4G779_HERAR Putative uncharacterized protein 139 2e-31 F1W3P1.1 F1W3P1_9BURK Putative outer membrane lipoprotein 130 2e-28 A6SXF2.1 A6SXF2_JANMA Uncharacterized conserved protein 120 1e-25 D5NLH3.1 D5NLH3_9BURK 17 kDa surface antigen 100 2e-19 >D8IYU7.1 D8IYU7_HERSS Transmembrane protein Length = 203 Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 135/209 (64%), Positives = 152/209 (72%), Gaps = 14/209 (6%) Query: 3 VVKS-PSRIHPLVATAAVAVTLVSLVGVAAITGLLPTSNSSVAPQQ-AMSDASTAPQTPQ 60 +VKS SR+HPLVA AAVAV LVSL+GVAA+TGLLP+S S+ +PQQ A + + P PQ Sbjct: 7 IVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNAGPMNPQ 66 Query: 61 QLQQAKNNQQPAPKSNYSQQAQNANSNSYGTPAPAAVARCSNCGEVQAVRAVQHTPQASG 120 Q AP + + Q A S AP A A CS+CGEV AVRAVQHTPQ SG Sbjct: 67 Q----------APATRLA--PQQAAYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTPQTSG 114 Query: 121 VGIVAGAVLGGVLGNQIGSGNGRTLATVAGAGAGGYAGNEVEKRSRTTTTYMVDVRMENG 180 VGI GAV+GG+LGNQIG GNGRTLAT+AGA GGYAGN VEK RTTTTY+VDVRM+NG Sbjct: 115 VGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVRMDNG 174 Query: 181 SVRSFPQSGEGWRVGDQVRVVNGHLTGRG 209 RSFPQSG WRVGDQVRVVNGHL RG Sbjct: 175 KSRSFPQSGANWRVGDQVRVVNGHLESRG 203 >A4G779.1 A4G779_HERAR Putative uncharacterized protein Length = 226 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 146/226 (64%), Gaps = 18/226 (7%) Query: 1 MDVVKSPSRIHPLVATAAVAVTLVSLVGVAAITGLLPTSNSSVAPQQAMS---------- 50 M+ + +RIHPLVA AA+ V LVSLVGVAA+TG+LP SNS+ A ++A++ Sbjct: 1 METKNNSNRIHPLVAAAAIGVLLVSLVGVAAMTGMLPNSNSASAQKEAIAALDKEAAEKA 60 Query: 51 ---DASTAPQTPQQLQQAKNNQQPAPKSNYSQQAQN-ANSNSYGTPAPAAVAR---CSNC 103 A+ ++ K + A ++ ++ + A AP+ VA+ C +C Sbjct: 61 AEAKAAEERANEARMAAQKTEDEKARQARLKEEDRRIAERAKARESAPSKVAQAQVCYDC 120 Query: 104 GEVQAVRAVQHTPQASGVGIVAGAVLGGVLGNQIGSGNGRTLATVAGAGAGGYAGNEVEK 163 G V++VR+VQ + SGVG+V GAV+GG+LGNQIG+G+GR+LATVAGA GG+AGNE+EK Sbjct: 121 GRVESVRSVQTAAKPSGVGVVGGAVVGGLLGNQIGNGSGRSLATVAGAVGGGFAGNEIEK 180 Query: 164 RSRTTTTYMVDVRMENGSVRSFPQSGE-GWRVGDQVRVVNGHLTGR 208 R+RT TY V VRME+G +R+FP + W GD+VRVV+G+L R Sbjct: 181 RTRTAMTYEVRVRMEDGKIRTFPYDNQPNWSAGDRVRVVDGYLRAR 226 >F1W3P1.1 F1W3P1_9BURK Putative outer membrane lipoprotein Length = 199 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/198 (54%), Positives = 128/198 (64%), Gaps = 17/198 (8%) Query: 21 VTLVSLVGVAAITGLLPTSNSSVAPQQAMSDASTAPQT--PQQLQQAKNNQQPAPKSNYS 78 V LVSLVGVAAITGLLP SS A Q A + QT P + ++N Q+ A Sbjct: 8 VILVSLVGVAAITGLLP---SSTANQSAEATVKANSQTSAPAPMLASENTQKSAASEPVV 64 Query: 79 QQAQNANSNSYGTPAPA-------AVARCSNCGEVQAVRAVQHTPQASGVGIVAGAVLGG 131 + A A P PA A A C NCG V++V+ +Q Q SGVG+ GAVLGG Sbjct: 65 KHASPAKQ----APRPATDNYQQQAAASCYNCGRVESVKTIQSAAQPSGVGVGVGAVLGG 120 Query: 132 VLGNQIGSGNGRTLATVAGAGAGGYAGNEVEKRSRTTTTYMVDVRMENGSVRSFP-QSGE 190 +LGNQ+G GNGRTLATVAGA GGYAGNEVEKRSR TT+Y V VRM++G +++FP S + Sbjct: 121 LLGNQVGGGNGRTLATVAGAVGGGYAGNEVEKRSRGTTSYQVRVRMDDGQLQTFPSDSPD 180 Query: 191 GWRVGDQVRVVNGHLTGR 208 GWR GD+VRVVNG LT R Sbjct: 181 GWRAGDEVRVVNGSLTSR 198 >A6SXF2.1 A6SXF2_JANMA Uncharacterized conserved protein Length = 221 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 111/216 (51%), Positives = 146/216 (67%), Gaps = 14/216 (6%) Query: 6 SPSRIHPLVATAAVAVTLVSLVGVAAITGLLPTSNSSVAPQQAMS------------DAS 53 S SRIHPL+A AAVAV LV LVG+AA+TG+LP SNSS + ++A++ + Sbjct: 7 STSRIHPLIAAAAVAVLLVCLVGIAAMTGMLPNSNSSGSQKEAIAALEKEAADKAAEAQA 66 Query: 54 TAPQTPQQLQQAKNNQQPAPKSNYSQQAQNANSNSYGTPAPAAVARCSNCGEVQAVRAVQ 113 + Q ++A Q A K+ QA+ +N AP A CSNCG ++++R+VQ Sbjct: 67 AEERADQARREADERQAAAAKAAKQAQARENANNKVAQAAPVAQV-CSNCGRIESIRSVQ 125 Query: 114 HTPQASGVGIVAGAVLGGVLGNQIGSGNGRTLATVAGAGAGGYAGNEVEKRSRTTTTYMV 173 + SGVGIV GAV+GG+LGNQIG+GNGR+LATVAGA GGYAGNE+EKR+RT TTY V Sbjct: 126 TAAKPSGVGIVGGAVVGGLLGNQIGNGNGRSLATVAGAVGGGYAGNEIEKRTRTATTYEV 185 Query: 174 DVRMENGSVRSFPQSGE-GWRVGDQVRVVNGHLTGR 208 VRME+G +R+FP + + W GDQVRVV+G+L R Sbjct: 186 RVRMEDGRIRTFPYNNQPNWNTGDQVRVVDGYLRAR 221 >D5NLH3.1 D5NLH3_9BURK 17 kDa surface antigen Length = 231 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 124/211 (58%), Gaps = 18/211 (8%) Query: 8 SRIHPLVATAAVAVTLVSLVGVAAITGLLPTSNSSVAPQ--------QAMSDASTAPQ-- 57 SRIHPL A AAVAV L S G+AA+TG+LPTS ++ +P Q S +T+PQ Sbjct: 13 SRIHPLFAGAAVAVILASATGIAAMTGILPTSRATTSPSTPVAPVTAQISSAPATSPQPA 72 Query: 58 TPQQLQQAKNNQQPAPKSNYS----QQAQNANSNSY---GTPAPAAVARCSNCGEVQAVR 110 T Q++ + QP + S Q ++ AN N+Y PAP VA +N GEV AV Sbjct: 73 TEQRVTHEDTSAQPRVHHHRSATVEQASRYANDNTYQNSAQPAPRPVAVDANAGEVVAVN 132 Query: 111 AVQHTPQASGVGIVAGAVLGGVLGNQIGSGNGRTLATVAGAGAGGYAGNEVEKRSRTTTT 170 VQ +G+G V GAV GG+LGNQ+G G GR L T+AGA GG AGN +E R T+ Sbjct: 133 TVQEAEPTTGLGAVGGAVAGGLLGNQVGGGRGRVLTTIAGAVGGGLAGNGIEHAVRKATS 192 Query: 171 YMVDVRMENGSVRSFPQSGE-GWRVGDQVRV 200 Y V VRM++GS R+F S + +VG +V V Sbjct: 193 YQVQVRMQDGSYRNFNYSTQPPVQVGQRVHV 223