BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0136.p (302 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8NLV5.1 D8NLV5_RALSO Glutamate/aspartate transport protein (ABC... 263 2e-68 B5S6M5.1 B5S6M5_RALSO Amino-acid-binding periplasmic protein (Pbp) 263 3e-68 D8NW67.1 D8NW67_RALSO Glutamate/aspartate transport protein (ABC... 261 9e-68 Q8Y0S0.1 Q8Y0S0_RALSO Probable amino-acid-binding periplasmic (P... 261 1e-67 D8NCD6.1 D8NCD6_RALSO Glutamate/aspartate transport protein (ABC... 260 2e-67 >D8NLV5.1 D8NLV5_RALSO Glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein Length = 303 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/279 (43%), Positives = 182/279 (65%), Gaps = 3/279 (1%) Query: 24 ASAYDTTKKIRETKTIVLSFMGSVDNLSPFVVIEPDGEVSGYTIELCRKIIQGIRQELRM 83 ASA +IR+T T+ +++ S SPF + D + GY ++LC +++ +R EL+ Sbjct: 28 ASATPVLDRIRDTGTVRIAYRESA---SPFSYSDADKKPIGYAVDLCLRVVDKLRTELKR 84 Query: 84 PDLKIQYLPVNASSRFSALLDNRADLECSVSTNNAERRKKVAFTIPHFFTSVRMLVKAGS 143 PDLK+QY+ V SSR +L+ +ADLECS +TNN ERR++VAFTIPH+ +RMLVK S Sbjct: 85 PDLKVQYVQVTPSSRIPTILEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTSS 144 Query: 144 SIKNWSDLRNKRLVTTRATAMIDVINKRSNIRYLDLTVLELENDRECFSMLEHGMADAFI 203 I W DLR+K +V+T+ T I + + ++ R L + V E++ + F+M+E G ADAF+ Sbjct: 145 GIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHADAFAMVESGKADAFV 204 Query: 204 MDEILLYGARENAVDPEKFIIVGTPLSVEPYAIMMRNDDPEFKKMVDRQMARLANSGEIY 263 MD++ LY R NA P + +VG ++VEPYAIM+ DPEFK+ VDR M + + Sbjct: 205 MDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRTVDRAMTSIILDYDAE 264 Query: 264 RLYNRWFMQAIGPDKRSLDMPMSYILRDSLRYPTDKITN 302 + Y +WF Q I P+ LDMPM+++LRDS +YP+DK+ + Sbjct: 265 KFYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >B5S6M5.1 B5S6M5_RALSO Amino-acid-binding periplasmic protein (Pbp) Length = 303 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 123/279 (44%), Positives = 182/279 (65%), Gaps = 3/279 (1%) Query: 24 ASAYDTTKKIRETKTIVLSFMGSVDNLSPFVVIEPDGEVSGYTIELCRKIIQGIRQELRM 83 ASA +IR+T T+ +++ S SPF + D + GY ++LC +++ +R EL+ Sbjct: 28 ASATPVLDRIRDTGTVRIAYRESA---SPFSYSDADKKPIGYAVDLCLRVVDKLRTELKR 84 Query: 84 PDLKIQYLPVNASSRFSALLDNRADLECSVSTNNAERRKKVAFTIPHFFTSVRMLVKAGS 143 PDLK+QY+ V SSR +L+ +ADLECS +TNN ERR++VAFTIPH+ +RMLVK S Sbjct: 85 PDLKVQYVLVTPSSRIPTILEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTSS 144 Query: 144 SIKNWSDLRNKRLVTTRATAMIDVINKRSNIRYLDLTVLELENDRECFSMLEHGMADAFI 203 I W DLR+K +V+T+ T I + + ++ R L + V E++ + F+M+E G ADAF+ Sbjct: 145 GIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHADAFAMVESGKADAFV 204 Query: 204 MDEILLYGARENAVDPEKFIIVGTPLSVEPYAIMMRNDDPEFKKMVDRQMARLANSGEIY 263 MD++ LY R NA P + +VG ++VEPYAIM+ DPEFK VDR M + + Sbjct: 205 MDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSVDRAMTAIILDYDAE 264 Query: 264 RLYNRWFMQAIGPDKRSLDMPMSYILRDSLRYPTDKITN 302 +LY +WF Q I P+ LDMPM+++LRDS +YP+DK+ + Sbjct: 265 KLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >D8NW67.1 D8NW67_RALSO Glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein Length = 303 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 121/279 (43%), Positives = 181/279 (64%), Gaps = 3/279 (1%) Query: 24 ASAYDTTKKIRETKTIVLSFMGSVDNLSPFVVIEPDGEVSGYTIELCRKIIQGIRQELRM 83 ASA +IR+T T+ ++ S +PF + D + GY ++LC +++ +R EL+ Sbjct: 28 ASATPVLDRIRDTGTVRIAHRESA---APFSYYDADKKPIGYAVDLCLRVVDKLRAELKR 84 Query: 84 PDLKIQYLPVNASSRFSALLDNRADLECSVSTNNAERRKKVAFTIPHFFTSVRMLVKAGS 143 PDLK+QY+ V S+R +++ +ADLECS +TNN ERR++VAFTIPH+ +RMLVK S Sbjct: 85 PDLKVQYVLVTPSTRIPTIMEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTSS 144 Query: 144 SIKNWSDLRNKRLVTTRATAMIDVINKRSNIRYLDLTVLELENDRECFSMLEHGMADAFI 203 I W DLRNK +V T+ T + + K ++ R L + + E++ E F+M+E G ADAF Sbjct: 145 GIHKWDDLRNKTVVLTKGTTSVTEMRKLNDSRVLHMKIEEVKEHAEAFAMVESGKADAFA 204 Query: 204 MDEILLYGARENAVDPEKFIIVGTPLSVEPYAIMMRNDDPEFKKMVDRQMARLANSGEIY 263 MD++ LY R NA P + +VG ++VEPYAIM+ DPEFK++VDR M + + Sbjct: 205 MDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRVVDRAMTAIILDYDAE 264 Query: 264 RLYNRWFMQAIGPDKRSLDMPMSYILRDSLRYPTDKITN 302 +LY +WF Q I P+ LDMPM+++LRDS +YP+DK+ + Sbjct: 265 KLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >Q8Y0S0.1 Q8Y0S0_RALSO Probable amino-acid-binding periplasmic (Pbp) abc transporter protein Length = 303 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 122/284 (42%), Positives = 184/284 (64%), Gaps = 6/284 (2%) Query: 19 AIASTASAYDTTKKIRETKTIVLSFMGSVDNLSPFVVIEPDGEVSGYTIELCRKIIQGIR 78 A+AST D +IR+T + ++ S SPF + D + GY ++LC +++ +R Sbjct: 26 ALASTTPVLD---RIRDTGIVRIAHRESA---SPFSYYDADKKPVGYAVDLCLRVVDKLR 79 Query: 79 QELRMPDLKIQYLPVNASSRFSALLDNRADLECSVSTNNAERRKKVAFTIPHFFTSVRML 138 EL+ PDLK+QY+ V S+R + + +ADLECS +TNN ERR++VAFTIPH+ +RML Sbjct: 80 TELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRERREQVAFTIPHYIAGIRML 139 Query: 139 VKAGSSIKNWSDLRNKRLVTTRATAMIDVINKRSNIRYLDLTVLELENDRECFSMLEHGM 198 VK S I W DLR+K +V+T+ T + + K ++ R L + E++ E F+M+E G Sbjct: 140 VKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEHAEAFAMVESGK 199 Query: 199 ADAFIMDEILLYGARENAVDPEKFIIVGTPLSVEPYAIMMRNDDPEFKKMVDRQMARLAN 258 ADAF+MD++ LY R NA P+ + +VG ++VEPYAIM+ DP+FK+MVDR M + Sbjct: 200 ADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKRMVDRAMTAIIL 259 Query: 259 SGEIYRLYNRWFMQAIGPDKRSLDMPMSYILRDSLRYPTDKITN 302 + +LY +WF Q I P+ LDMPM+++LRDS +YP+DK+ + Sbjct: 260 DYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >D8NCD6.1 D8NCD6_RALSO Glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein Length = 304 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 183/280 (65%), Gaps = 4/280 (1%) Query: 24 ASAYDTTKKIRETKTIVLSFMGSVDNLSPFVVIEPDGEVS-GYTIELCRKIIQGIRQELR 82 ASA +IR+T T+ +++ S SPF + D + GYT++LC +++ +R EL+ Sbjct: 28 ASATPVLDRIRDTGTVRIAYRESA---SPFSYYDADSKKPIGYTVDLCLRVVDKLRTELK 84 Query: 83 MPDLKIQYLPVNASSRFSALLDNRADLECSVSTNNAERRKKVAFTIPHFFTSVRMLVKAG 142 PDLK+QY+ + S+R A+ + +ADLECS +TNN ERR++VAFTIPH+ +RMLVK Sbjct: 85 RPDLKVQYVLITPSTRIPAIQEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTA 144 Query: 143 SSIKNWSDLRNKRLVTTRATAMIDVINKRSNIRYLDLTVLELENDRECFSMLEHGMADAF 202 S I W DLR+K +V+T+ T + + K ++ R L + E++ E F+M+E G ADAF Sbjct: 145 SGIHKWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEHAEAFAMVESGKADAF 204 Query: 203 IMDEILLYGARENAVDPEKFIIVGTPLSVEPYAIMMRNDDPEFKKMVDRQMARLANSGEI 262 +MD++ LY R NA P+ + +VG ++VEPYAIM+ DP+FK VDR M + + Sbjct: 205 VMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKHTVDRAMTAIILDYDA 264 Query: 263 YRLYNRWFMQAIGPDKRSLDMPMSYILRDSLRYPTDKITN 302 +LY +WF Q I P+ LDMPM+++LRDS +YP+DK+ + Sbjct: 265 EKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 304