BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0104.p (214 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRQ6.1 D8IRQ6_HERSS 3-methyl-adenine DNA glycosylase II protei... 381 e-104 A6SZV0.1 A6SZV0_JANMA DNA-3-methyladenine glycosylase II EC=3.2.... 352 3e-95 F1VYZ5.1 F1VYZ5_9BURK DNA-3-methyladenine glycosylase II 344 6e-93 A4G4M3.2 A4G4M3_HERAR Putative DNA-3-methyladenine glycosylase E... 343 7e-93 B5SM45.1 B5SM45_RALSO Dna glycosylase protein 327 6e-88 >D8IRQ6.1 D8IRQ6_HERSS 3-methyl-adenine DNA glycosylase II protein EC=3.2.2.20 EC=3.2.2.21 Length = 219 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/208 (87%), Positives = 192/208 (92%) Query: 3 KNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQQI 62 K + DP++ VPAYWE+AKAELMKRDRIMRK+IPQFGDLQLT RGDAFTTLARS+IGQQI Sbjct: 6 KASDVDPSLIVPAYWEEAKAELMKRDRIMRKIIPQFGDLQLTVRGDAFTTLARSVIGQQI 65 Query: 63 STKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPD 122 STK+A AVWQRFLEACP+C P QVI+ GPE L CGLSKRKAEYILDLA HFKAKTVHPD Sbjct: 66 STKAANAVWQRFLEACPRCTPGQVIRTGPEGLAGCGLSKRKAEYILDLAAHFKAKTVHPD 125 Query: 123 KWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGEPV 182 KWAEMEDE VIAEM+QIRGIGRWTAEMFLIFNLLRPNVLPLDD GLLKGIS SYFSGEPV Sbjct: 126 KWAEMEDEAVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDLGLLKGISISYFSGEPV 185 Query: 183 SRSDAREVAANWEPWRTVATWYLWRSLD 210 SRSDAREVAANWEPWRTVATWYLWRSLD Sbjct: 186 SRSDAREVAANWEPWRTVATWYLWRSLD 213 >A6SZV0.1 A6SZV0_JANMA DNA-3-methyladenine glycosylase II EC=3.2.2.21 Length = 215 Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 170/210 (80%), Positives = 186/210 (88%), Gaps = 1/210 (0%) Query: 1 MIKNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQ 60 M K D +PAYWE+AKAELMKRDRI+RKLIPQFGDL L GRG+AF+TLARSIIGQ Sbjct: 1 MGKTIATDETRILPAYWEEAKAELMKRDRILRKLIPQFGDLHLVGRGEAFSTLARSIIGQ 60 Query: 61 QISTKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVH 120 QISTK+A +VWQRFLE CPKC PAQVIKAG + L CGLSKRKAEYI DLA+HFKAK V+ Sbjct: 61 QISTKAADSVWQRFLEVCPKCTPAQVIKAG-DKLATCGLSKRKAEYIFDLADHFKAKRVN 119 Query: 121 PDKWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGE 180 DKWAEMEDE+VIAE++QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLL GIS +YFSGE Sbjct: 120 CDKWAEMEDEEVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDLGLLAGISRNYFSGE 179 Query: 181 PVSRSDAREVAANWEPWRTVATWYLWRSLD 210 PVSRSDAREVAANWEP+RTVATWYLWRSLD Sbjct: 180 PVSRSDAREVAANWEPYRTVATWYLWRSLD 209 >F1VYZ5.1 F1VYZ5_9BURK DNA-3-methyladenine glycosylase II Length = 216 Score = 344 bits (882), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 162/200 (81%), Positives = 176/200 (88%) Query: 11 ISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQQISTKSAQAV 70 + P YWEDAK ELMKRDRIMRKLIPQFGD+ LTGRG+ F TLARSIIGQQIS KSA+A Sbjct: 11 LGAPGYWEDAKIELMKRDRIMRKLIPQFGDVHLTGRGEPFVTLARSIIGQQISVKSAEAA 70 Query: 71 WQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPDKWAEMEDE 130 WQRFL CPK PAQV+KAG +L CGLSKRKA+YILDLA HFKAK VH DKWAEM+DE Sbjct: 71 WQRFLLVCPKSTPAQVVKAGAADLAGCGLSKRKADYILDLAEHFKAKRVHADKWAEMDDE 130 Query: 131 DVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGEPVSRSDAREV 190 VIAE++QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLL GIS +YFSGEPVSRSDAREV Sbjct: 131 AVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDVGLLNGISLNYFSGEPVSRSDAREV 190 Query: 191 AANWEPWRTVATWYLWRSLD 210 +ANWEPWRTVATWYLWRSL+ Sbjct: 191 SANWEPWRTVATWYLWRSLE 210 >A4G4M3.2 A4G4M3_HERAR Putative DNA-3-methyladenine glycosylase EC=3.2.2.21 Length = 215 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 165/214 (77%), Positives = 184/214 (85%), Gaps = 1/214 (0%) Query: 1 MIKNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQ 60 M K D +P YWE+AK ELMKRDRIMRKLIPQFGDL L RG+ F+TLARSIIGQ Sbjct: 1 MGKMTATDETRILPVYWEEAKVELMKRDRIMRKLIPQFGDLHLASRGEPFSTLARSIIGQ 60 Query: 61 QISTKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVH 120 QIS K+A +VWQRFLE CPKC P QVIKAG + L +CGLSKRK+EYILDLA+HFKAK V+ Sbjct: 61 QISVKAADSVWQRFLEICPKCTPVQVIKAG-DKLASCGLSKRKSEYILDLADHFKAKRVN 119 Query: 121 PDKWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGE 180 DKWAEMEDEDVIA+++QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLL GIS +YFSGE Sbjct: 120 CDKWAEMEDEDVIADLIQIRGIGRWTAEMFLIFNLLRPNILPLDDVGLLAGISRNYFSGE 179 Query: 181 PVSRSDAREVAANWEPWRTVATWYLWRSLDGAAS 214 PVSRSDAREVAANWEP+RTVATWYLWRSLD ++ Sbjct: 180 PVSRSDAREVAANWEPYRTVATWYLWRSLDAVSA 213 >B5SM45.1 B5SM45_RALSO Dna glycosylase protein Length = 300 Score = 327 bits (839), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 151/201 (75%), Positives = 173/201 (86%) Query: 14 PAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQQISTKSAQAVWQR 73 PAYW+DA A+LMKRDRI+RK+IP FG L RGD F TLARSI+GQQIS K+AQ+VW+R Sbjct: 99 PAYWQDACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWER 158 Query: 74 FLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPDKWAEMEDEDVI 133 +EACPK +PAQ ++AG E L +CGLSKRKAEYILDLA HF+ TVH KWAEMEDEDVI Sbjct: 159 LVEACPKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVI 218 Query: 134 AEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGEPVSRSDAREVAAN 193 AE+ QIRGIGRWTAEMFL+FNLLRPNVLPLDD GL+ IS +YFSGEPV+RS+AREVAAN Sbjct: 219 AELTQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTRSEAREVAAN 278 Query: 194 WEPWRTVATWYLWRSLDGAAS 214 WEPWRTVATWY+WRSLD A + Sbjct: 279 WEPWRTVATWYMWRSLDTATT 299