BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0103.p (403 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRQ5.1 D8IRQ5_HERSS Cysteinyl-tRNA synthetase protein EC=6.1.1.16 697 0.0 A6SZV1.1 SYC_JANMA Cysteinyl-tRNA synthetase EC=6.1.1.16 667 0.0 A4G4M2.1 SYC_HERAR Cysteinyl-tRNA synthetase EC=6.1.1.16 655 0.0 B5RZM2.1 B5RZM2_RALSO Cysteinyl-trna synthetase (Cysteine--trna ... 631 e-179 B5SM46.1 B5SM46_RALSO Cysteinyl-trna synthetase (Cysteine--trna ... 631 e-179 >D8IRQ5.1 D8IRQ5_HERSS Cysteinyl-tRNA synthetase protein EC=6.1.1.16 Length = 463 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/386 (84%), Positives = 354/386 (91%), Gaps = 3/386 (0%) Query: 1 MSTLKIYNTLARDKQAFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRATG 60 MS LKIYNTLARDKQ FSPIEPGKVRLYVCGMTVYDYCH+GHARV+VVFDMVQRWLRA+G Sbjct: 1 MSELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASG 60 Query: 61 FEVTYVRNITDIDDKIIQRAIENRESIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYV 120 +EVTYVRNITDIDDKII+RA+EN E+I QLT RFIDAM+ED+AALGVQ+PDHEPRAT YV Sbjct: 61 YEVTYVRNITDIDDKIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYV 120 Query: 121 PQMLDLISKLQANGLAYQGSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 PQMLDLI KL+ NGLAY+ SDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP Sbjct: 121 PQMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 Query: 181 LDFVLWKAAKESEPGEVKWDSPWGKGRPGWHIECSAMASDLLGDHFDIHGGGQDLQFPHH 240 LDFVLWKAAK +EP E KWDSPWG GRPGWHIECSAM+SDLLGDHFDIHGGGQDLQFPHH Sbjct: 181 LDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHH 240 Query: 241 ENEIAQSEGAHQHAFVNYWMHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRFFILR 300 ENEIAQSEGAHQH FVNYWMHNGF+R+DNEKMSKSLGNFFTIRDVLKKYDPEV+RFFILR Sbjct: 241 ENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILR 300 Query: 301 AHYRSPLNYSDAHLDDARVALTRLYTALKDVPSEADAAVTVDQSDVYAQRFAEAMNDDFN 360 AHYRSPLNYSDAHLDDAR ALTRLYTALKDVP +A V + +A R A+A+NDDFN Sbjct: 301 AHYRSPLNYSDAHLDDARQALTRLYTALKDVPPQAGGLVA---DEAHAVRLADALNDDFN 357 Query: 361 TPMAVAVLFDLANEVNXRRASPPSKQ 386 TP+A+AVLF+LANEVN R+ ++Q Sbjct: 358 TPVAIAVLFELANEVNRSRSPVQARQ 383 >A6SZV1.1 SYC_JANMA Cysteinyl-tRNA synthetase EC=6.1.1.16 Length = 464 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/386 (81%), Positives = 343/386 (88%), Gaps = 3/386 (0%) Query: 1 MSTLKIYNTLARDKQAFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRATG 60 MS LKIYNTLAR+KQ F+PIEPGKVR+YVCGMTVYDYCH+GHARVMVVFD+VQRWLRA+G Sbjct: 1 MSALKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASG 60 Query: 61 FEVTYVRNITDIDDKIIQRAIENRESIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYV 120 +EV YVRNITDIDDKII+RA EN ESI LTQRFIDAMDED+AALGVQKPDHEPRAT YV Sbjct: 61 YEVNYVRNITDIDDKIIKRAAENGESISALTQRFIDAMDEDAAALGVQKPDHEPRATNYV 120 Query: 121 PQMLDLISKLQANGLAYQGSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 PQML LI L+ NGLAY+ SDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP Sbjct: 121 PQMLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 Query: 181 LDFVLWKAAKESEPGEVKWDSPWGKGRPGWHIECSAMASDLLGDHFDIHGGGQDLQFPHH 240 LDFVLWK++KE+EP EVKW S WG GRPGWHIECSAMA +LLG FDIHGGG DLQFPHH Sbjct: 181 LDFVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADLQFPHH 240 Query: 241 ENEIAQSEGAHQHAFVNYWMHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRFFILR 300 ENEIAQSEGA QH FVNYWMHNGF+RVDNEKMSKSLGNFFTIR+VL KYD EVVRFFILR Sbjct: 241 ENEIAQSEGASQHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLAKYDSEVVRFFILR 300 Query: 301 AHYRSPLNYSDAHLDDARVALTRLYTALKDVPSEADAAVTVDQSDVYAQRFAEAMNDDFN 360 AHYRS LNYSDAHLDDAR ALTR+YTALK V + A +D ++ +A RFAEAMNDDFN Sbjct: 301 AHYRSQLNYSDAHLDDARNALTRMYTALKGVAPDQAA---LDMTEAHALRFAEAMNDDFN 357 Query: 361 TPMAVAVLFDLANEVNXRRASPPSKQ 386 TP+AVAVLF+LANE+N ++ ++Q Sbjct: 358 TPLAVAVLFELANEINKTKSPALARQ 383 >A4G4M2.1 SYC_HERAR Cysteinyl-tRNA synthetase EC=6.1.1.16 Length = 462 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/389 (78%), Positives = 345/389 (88%), Gaps = 3/389 (0%) Query: 1 MSTLKIYNTLARDKQAFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRATG 60 MS LKIYNTLAR+KQ F+PI+PGKVR+YVCGMTVYDYCH+GHARVMVVFD+VQRWLRA+G Sbjct: 1 MSALKIYNTLAREKQLFTPIDPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASG 60 Query: 61 FEVTYVRNITDIDDKIIQRAIENRESIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYV 120 F+VTYVRNITDIDDKII+RA EN E+I QLTQRFIDAMDED+AALGVQKPDHEPRAT YV Sbjct: 61 FDVTYVRNITDIDDKIIKRAAENGETISQLTQRFIDAMDEDAAALGVQKPDHEPRATNYV 120 Query: 121 PQMLDLISKLQANGLAYQGSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 PQML LI L+ NGLAY+ +DGDVNYSVRDF GYGKLSGKSLDDLRAGERVDVNTGK DP Sbjct: 121 PQMLGLIDMLERNGLAYKAADGDVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNTGKHDP 180 Query: 181 LDFVLWKAAKESEPGEVKWDSPWGKGRPGWHIECSAMASDLLGDHFDIHGGGQDLQFPHH 240 LDFVLWK++KE+EP EVKW S WG GRPGWHIECSAMA +LLG+ FDIHGGG DLQFPHH Sbjct: 181 LDFVLWKSSKENEPEEVKWSSKWGSGRPGWHIECSAMACELLGEQFDIHGGGADLQFPHH 240 Query: 241 ENEIAQSEGAHQHAFVNYWMHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRFFILR 300 ENEIAQSEGA H FVNYWMHNGF+RVDNEKMSKSLGNFFTIR+VL+K+D EVVRFFILR Sbjct: 241 ENEIAQSEGASGHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLEKFDAEVVRFFILR 300 Query: 301 AHYRSPLNYSDAHLDDARVALTRLYTALKDVPSEADAAVTVDQSDVYAQRFAEAMNDDFN 360 AHYRS LNYSDAHLDDAR ALTR+YTALKDV + + +D ++ +A RF +AMNDDFN Sbjct: 301 AHYRSQLNYSDAHLDDARNALTRMYTALKDVAPD---HLPLDMTEAHAVRFIDAMNDDFN 357 Query: 361 TPMAVAVLFDLANEVNXRRASPPSKQGIS 389 TP+A+AVLF+LANE+N ++ ++Q I Sbjct: 358 TPLAIAVLFELANEINREKSPVLARQLIG 386 >B5RZM2.1 B5RZM2_RALSO Cysteinyl-trna synthetase (Cysteine--trna ligase)(Cysrs) protein EC=6.1.1.16 Length = 465 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 294/380 (77%), Positives = 333/380 (87%), Gaps = 2/380 (0%) Query: 1 MSTLKIYNTLARDKQAFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRATG 60 M +LKIYNTLAR+KQ F PIEPG+VR+YVCGMTVYDYCH+GHARVMVVFDMVQRWLRA+ Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASA 60 Query: 61 FEVTYVRNITDIDDKIIQRAIENRESIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYV 120 ++VTYVRNITDIDDKII+RA+EN E+IG LT RFI AM ED+ ALGVQ+PDHEPRAT YV Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYV 120 Query: 121 PQMLDLISKLQANGLAYQGSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 PQML +I KLQANGLAYQ +DGDVNY+VR FPGYGKLSGKSL+DLRAGERV N K+DP Sbjct: 121 PQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDP 180 Query: 181 LDFVLWKAAKESEPGEVKWDSPWGKGRPGWHIECSAMASDLLGDHFDIHGGGQDLQFPHH 240 LDFVLWK+AK EP E +W SPWG+GRPGWHIECSAM+ +LLG HFD+HGGG DLQFPHH Sbjct: 181 LDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHH 240 Query: 241 ENEIAQSEGAHQHAFVNYWMHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRFFILR 300 ENEIAQ+EGA+ FVN WMHNGF+RV++EKMSKSLGNFFTIR+VLK YDPEVVRFFILR Sbjct: 241 ENEIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILR 300 Query: 301 AHYRSPLNYSDAHLDDARVALTRLYTALKDVPSEADAAVTVDQSDVYAQRFAEAMNDDFN 360 +HYRS LNYSDAHLDDAR ALTRLYTALKDVP+ A D S+ + QRF EAMNDDFN Sbjct: 301 SHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGA--KPDWSESHGQRFREAMNDDFN 358 Query: 361 TPMAVAVLFDLANEVNXRRA 380 TP+A+AVLF+LA+EVN R+ Sbjct: 359 TPVAMAVLFELASEVNKTRS 378 >B5SM46.1 B5SM46_RALSO Cysteinyl-trna synthetase (Cysteine--trna ligase)(Cysrs) protein EC=6.1.1.16 Length = 465 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 294/380 (77%), Positives = 334/380 (87%), Gaps = 2/380 (0%) Query: 1 MSTLKIYNTLARDKQAFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRATG 60 M +LKIYNTLAR+KQ F PIEPG+VR+YVCGMTVYDYCH+GHARVMVVFDMVQRWLRA+ Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASA 60 Query: 61 FEVTYVRNITDIDDKIIQRAIENRESIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYV 120 ++VTYVRNITDIDDKII+RA+EN E+IG LT RFI AM ED+ ALGVQ+PDHEPRAT YV Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYV 120 Query: 121 PQMLDLISKLQANGLAYQGSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDP 180 PQML +I KLQANGLAYQ +DGDVNY+VR FPGYGKLSGKSL+DLRAGERV N K+DP Sbjct: 121 PQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDP 180 Query: 181 LDFVLWKAAKESEPGEVKWDSPWGKGRPGWHIECSAMASDLLGDHFDIHGGGQDLQFPHH 240 LDFVLWK+AK EP E +W SPWG+GRPGWHIECSAM+ +LLG HFD+HGGG DLQFPHH Sbjct: 181 LDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHH 240 Query: 241 ENEIAQSEGAHQHAFVNYWMHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRFFILR 300 ENEIAQ+EGA+ + FVN WMHNGF+RV++EKMSKSLGNFFTIR+VLK YDPEVVRFFILR Sbjct: 241 ENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILR 300 Query: 301 AHYRSPLNYSDAHLDDARVALTRLYTALKDVPSEADAAVTVDQSDVYAQRFAEAMNDDFN 360 +HYRS LNYSDAHLDDAR ALTRLYTALKDVP+ A D S+ + QRF EAMNDDFN Sbjct: 301 SHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGA--KPDWSESHGQRFREAMNDDFN 358 Query: 361 TPMAVAVLFDLANEVNXRRA 380 TP+A+AVLF+LA+EVN R+ Sbjct: 359 TPVAMAVLFELASEVNKTRS 378